8EVA
Cryo-EM structure of cGMP bound truncated human CNGA3/CNGB3 channel in lipid nanodisc, transition state 2
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005216 | molecular_function | monoatomic ion channel activity |
A | 0005221 | molecular_function | intracellularly cyclic nucleotide-activated monoatomic cation channel activity |
A | 0005249 | molecular_function | voltage-gated potassium channel activity |
A | 0006811 | biological_process | monoatomic ion transport |
A | 0006813 | biological_process | potassium ion transport |
A | 0016020 | cellular_component | membrane |
A | 0055085 | biological_process | transmembrane transport |
B | 0005216 | molecular_function | monoatomic ion channel activity |
B | 0005221 | molecular_function | intracellularly cyclic nucleotide-activated monoatomic cation channel activity |
B | 0005249 | molecular_function | voltage-gated potassium channel activity |
B | 0006811 | biological_process | monoatomic ion transport |
B | 0006813 | biological_process | potassium ion transport |
B | 0016020 | cellular_component | membrane |
B | 0055085 | biological_process | transmembrane transport |
C | 0005216 | molecular_function | monoatomic ion channel activity |
C | 0005221 | molecular_function | intracellularly cyclic nucleotide-activated monoatomic cation channel activity |
C | 0005249 | molecular_function | voltage-gated potassium channel activity |
C | 0006811 | biological_process | monoatomic ion transport |
C | 0006813 | biological_process | potassium ion transport |
C | 0016020 | cellular_component | membrane |
C | 0055085 | biological_process | transmembrane transport |
D | 0000166 | molecular_function | nucleotide binding |
D | 0001750 | cellular_component | photoreceptor outer segment |
D | 0005216 | molecular_function | monoatomic ion channel activity |
D | 0005221 | molecular_function | intracellularly cyclic nucleotide-activated monoatomic cation channel activity |
D | 0005222 | molecular_function | intracellularly cAMP-activated cation channel activity |
D | 0005223 | molecular_function | intracellularly cGMP-activated cation channel activity |
D | 0005886 | cellular_component | plasma membrane |
D | 0006811 | biological_process | monoatomic ion transport |
D | 0006812 | biological_process | monoatomic cation transport |
D | 0007165 | biological_process | signal transduction |
D | 0007601 | biological_process | visual perception |
D | 0016020 | cellular_component | membrane |
D | 0017071 | cellular_component | intracellular cyclic nucleotide activated cation channel complex |
D | 0030553 | molecular_function | cGMP binding |
D | 0034220 | biological_process | monoatomic ion transmembrane transport |
D | 0055085 | biological_process | transmembrane transport |
D | 0098655 | biological_process | monoatomic cation transmembrane transport |
D | 1902495 | cellular_component | transmembrane transporter complex |
Functional Information from PROSITE/UniProt
site_id | PS00888 |
Number of Residues | 17 |
Details | CNMP_BINDING_1 Cyclic nucleotide-binding domain signature 1. VCkKGEiGKeMYIIkhG |
Chain | Residue | Details |
D | VAL551-GLY567 | |
A | ILE509-GLY525 |
site_id | PS00889 |
Number of Residues | 21 |
Details | CNMP_BINDING_2 Cyclic nucleotide-binding domain signature 2. FGEiSLlaagggnr...RTAnVvA |
Chain | Residue | Details |
D | PHE590-ALA610 | |
A | PHE547-SER570 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 86 |
Details | Transmembrane: {"description":"Helical; Name=S1","evidences":[{"source":"PubMed","id":"34969976","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RHS","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 122 |
Details | Topological domain: {"description":"Extracellular","evidences":[{"evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 80 |
Details | Transmembrane: {"description":"Helical; Name=S2","evidences":[{"source":"PubMed","id":"34969976","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RHS","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 145 |
Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 65 |
Details | Transmembrane: {"description":"Helical; Name=S4","evidences":[{"source":"PubMed","id":"34969976","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RHS","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 88 |
Details | Transmembrane: {"description":"Helical; Name=S5","evidences":[{"source":"PubMed","id":"34969976","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RHS","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 116 |
Details | Transmembrane: {"description":"Helical; Name=P-helix","evidences":[{"source":"PubMed","id":"34969976","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RHS","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 96 |
Details | Transmembrane: {"description":"Helical; Name=S6","evidences":[{"source":"PubMed","id":"34969976","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RHS","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI9 |
Number of Residues | 423 |
Details | Region: {"description":"Ion conduction pathway","evidences":[{"source":"PubMed","id":"34969976","evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI10 |
Number of Residues | 12 |
Details | Region: {"description":"Selectivity filter","evidences":[{"source":"PubMed","id":"34969976","evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI11 |
Number of Residues | 307 |
Details | Region: {"description":"C-linker","evidences":[{"source":"PubMed","id":"34969976","evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI12 |
Number of Residues | 240 |
Details | Region: {"description":"Cyclic nucleotide-binding domain","evidences":[{"source":"PubMed","id":"37463923","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8EUC","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI13 |
Number of Residues | 22 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"37463923","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8EUC","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI14 |
Number of Residues | 8 |
Details | Site: {"description":"Central gate","evidences":[{"source":"PubMed","id":"34969976","evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI15 |
Number of Residues | 3 |
Details | Glycosylation: {"description":"N-linked (GalNAc...) asparagine","evidences":[{"source":"PubMed","id":"34969976","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI16 |
Number of Residues | 36 |
Details | Transmembrane: {"description":"Helical; Name=S3","evidences":[{"source":"PubMed","id":"34969976","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7RHS","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI17 |
Number of Residues | 1 |
Details | Site: {"description":"Occludes the pore below the central gate","evidences":[{"source":"PubMed","id":"34969976","evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |