8EUP

Ytm1 associated 60S nascent ribosome State 1A

Functional Information from GO Data

Chain	GOid	namespace	contents
3	0000460	biological_process	maturation of 5.8S rRNA
3	0000470	biological_process	maturation of LSU-rRNA
3	0003674	molecular_function	molecular_function
3	0005634	cellular_component	nucleus
3	0005730	cellular_component	nucleolus
3	0005737	cellular_component	cytoplasm
3	0005829	cellular_component	cytosol
3	0030684	cellular_component	preribosome
3	0030687	cellular_component	preribosome, large subunit precursor
3	0042273	biological_process	ribosomal large subunit biogenesis
3	1902626	biological_process	assembly of large subunit precursor of preribosome
4	0003674	molecular_function	molecular_function
4	0005634	cellular_component	nucleus
4	0005730	cellular_component	nucleolus
4	0006364	biological_process	rRNA processing
4	0030684	cellular_component	preribosome
4	0030688	cellular_component	preribosome, small subunit precursor
4	1902626	biological_process	assembly of large subunit precursor of preribosome
5	0003674	molecular_function	molecular_function
5	0005634	cellular_component	nucleus
5	0005730	cellular_component	nucleolus
5	0006364	biological_process	rRNA processing
5	0030684	cellular_component	preribosome
5	0030687	cellular_component	preribosome, large subunit precursor
5	0042254	biological_process	ribosome biogenesis
5	0042273	biological_process	ribosomal large subunit biogenesis
A	0000027	biological_process	ribosomal large subunit assembly
A	0003723	molecular_function	RNA binding
A	0005515	molecular_function	protein binding
A	0005634	cellular_component	nucleus
A	0005730	cellular_component	nucleolus
A	0005737	cellular_component	cytoplasm
A	0005829	cellular_component	cytosol
A	0006364	biological_process	rRNA processing
A	0019843	molecular_function	rRNA binding
A	0030684	cellular_component	preribosome
A	0032153	cellular_component	cell division site
A	0042254	biological_process	ribosome biogenesis
A	1902626	biological_process	assembly of large subunit precursor of preribosome
b	0000054	biological_process	ribosomal subunit export from nucleus
b	0000166	molecular_function	nucleotide binding
b	0003723	molecular_function	RNA binding
b	0003924	molecular_function	GTPase activity
b	0005525	molecular_function	GTP binding
b	0005730	cellular_component	nucleolus
b	0030684	cellular_component	preribosome
b	0042254	biological_process	ribosome biogenesis
b	0042273	biological_process	ribosomal large subunit biogenesis
b	0072686	cellular_component	mitotic spindle
b	1902626	biological_process	assembly of large subunit precursor of preribosome
B	0002181	biological_process	cytoplasmic translation
B	0003723	molecular_function	RNA binding
B	0003735	molecular_function	structural constituent of ribosome
B	0005737	cellular_component	cytoplasm
B	0005829	cellular_component	cytosol
B	0005840	cellular_component	ribosome
B	0006412	biological_process	translation
B	0022625	cellular_component	cytosolic large ribosomal subunit
B	0030684	cellular_component	preribosome
B	1990904	cellular_component	ribonucleoprotein complex
C	0002181	biological_process	cytoplasmic translation
C	0003723	molecular_function	RNA binding
C	0003735	molecular_function	structural constituent of ribosome
C	0005737	cellular_component	cytoplasm
C	0005829	cellular_component	cytosol
C	0005840	cellular_component	ribosome
C	0006412	biological_process	translation
C	0022625	cellular_component	cytosolic large ribosomal subunit
C	0030684	cellular_component	preribosome
C	1990904	cellular_component	ribonucleoprotein complex
D	0000166	molecular_function	nucleotide binding
D	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
D	0003676	molecular_function	nucleic acid binding
D	0003723	molecular_function	RNA binding
D	0003724	molecular_function	RNA helicase activity
D	0004386	molecular_function	helicase activity
D	0005524	molecular_function	ATP binding
D	0005634	cellular_component	nucleus
D	0005730	cellular_component	nucleolus
D	0006364	biological_process	rRNA processing
D	0016787	molecular_function	hydrolase activity
D	0016887	molecular_function	ATP hydrolysis activity
D	0030684	cellular_component	preribosome
D	0042254	biological_process	ribosome biogenesis
D	1902626	biological_process	assembly of large subunit precursor of preribosome
e	0002181	biological_process	cytoplasmic translation
e	0003735	molecular_function	structural constituent of ribosome
e	0005515	molecular_function	protein binding
e	0005634	cellular_component	nucleus
e	0005737	cellular_component	cytoplasm
e	0005829	cellular_component	cytosol
e	0005840	cellular_component	ribosome
e	0006412	biological_process	translation
e	0022625	cellular_component	cytosolic large ribosomal subunit
e	0030684	cellular_component	preribosome
e	1990904	cellular_component	ribonucleoprotein complex
E	0002181	biological_process	cytoplasmic translation
E	0003723	molecular_function	RNA binding
E	0003735	molecular_function	structural constituent of ribosome
E	0005634	cellular_component	nucleus
E	0005730	cellular_component	nucleolus
E	0005737	cellular_component	cytoplasm
E	0005829	cellular_component	cytosol
E	0005840	cellular_component	ribosome
E	0006412	biological_process	translation
E	0022625	cellular_component	cytosolic large ribosomal subunit
E	0030684	cellular_component	preribosome
E	0032991	cellular_component	protein-containing complex
E	1990904	cellular_component	ribonucleoprotein complex
f	0002181	biological_process	cytoplasmic translation
f	0003735	molecular_function	structural constituent of ribosome
f	0005737	cellular_component	cytoplasm
f	0005840	cellular_component	ribosome
f	0006412	biological_process	translation
f	0030684	cellular_component	preribosome
f	0042273	biological_process	ribosomal large subunit biogenesis
f	1990904	cellular_component	ribonucleoprotein complex
F	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
F	0002181	biological_process	cytoplasmic translation
F	0003723	molecular_function	RNA binding
F	0003735	molecular_function	structural constituent of ribosome
F	0005730	cellular_component	nucleolus
F	0005737	cellular_component	cytoplasm
F	0005840	cellular_component	ribosome
F	0022625	cellular_component	cytosolic large ribosomal subunit
F	0030684	cellular_component	preribosome
F	1990904	cellular_component	ribonucleoprotein complex
G	0000470	biological_process	maturation of LSU-rRNA
G	0002181	biological_process	cytoplasmic translation
G	0003723	molecular_function	RNA binding
G	0003735	molecular_function	structural constituent of ribosome
G	0005737	cellular_component	cytoplasm
G	0005840	cellular_component	ribosome
G	0022625	cellular_component	cytosolic large ribosomal subunit
G	0030684	cellular_component	preribosome
G	0042254	biological_process	ribosome biogenesis
G	1990904	cellular_component	ribonucleoprotein complex
h	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
h	0002181	biological_process	cytoplasmic translation
h	0003729	molecular_function	mRNA binding
h	0003735	molecular_function	structural constituent of ribosome
h	0005730	cellular_component	nucleolus
h	0005737	cellular_component	cytoplasm
h	0005829	cellular_component	cytosol
h	0005840	cellular_component	ribosome
h	0006412	biological_process	translation
h	0022625	cellular_component	cytosolic large ribosomal subunit
h	0030684	cellular_component	preribosome
h	1990904	cellular_component	ribonucleoprotein complex
H	0002181	biological_process	cytoplasmic translation
H	0003735	molecular_function	structural constituent of ribosome
H	0005634	cellular_component	nucleus
H	0005737	cellular_component	cytoplasm
H	0005829	cellular_component	cytosol
H	0005840	cellular_component	ribosome
H	0006412	biological_process	translation
H	0019843	molecular_function	rRNA binding
H	0022625	cellular_component	cytosolic large ribosomal subunit
H	0030684	cellular_component	preribosome
H	1990904	cellular_component	ribonucleoprotein complex
i	0002181	biological_process	cytoplasmic translation
i	0003735	molecular_function	structural constituent of ribosome
i	0005737	cellular_component	cytoplasm
i	0005829	cellular_component	cytosol
i	0005840	cellular_component	ribosome
i	0006412	biological_process	translation
i	0022625	cellular_component	cytosolic large ribosomal subunit
i	0030684	cellular_component	preribosome
i	1990904	cellular_component	ribonucleoprotein complex
j	0002181	biological_process	cytoplasmic translation
j	0003723	molecular_function	RNA binding
j	0003735	molecular_function	structural constituent of ribosome
j	0005737	cellular_component	cytoplasm
j	0005829	cellular_component	cytosol
j	0005840	cellular_component	ribosome
j	0006412	biological_process	translation
j	0008270	molecular_function	zinc ion binding
j	0019843	molecular_function	rRNA binding
j	0022625	cellular_component	cytosolic large ribosomal subunit
j	0030684	cellular_component	preribosome
j	0046872	molecular_function	metal ion binding
j	1990904	cellular_component	ribonucleoprotein complex
J	0005515	molecular_function	protein binding
J	0005634	cellular_component	nucleus
J	0005730	cellular_component	nucleolus
J	0006364	biological_process	rRNA processing
J	0030684	cellular_component	preribosome
J	0030687	cellular_component	preribosome, large subunit precursor
J	0034399	cellular_component	nuclear periphery
J	0042254	biological_process	ribosome biogenesis
J	0042273	biological_process	ribosomal large subunit biogenesis
K	0003723	molecular_function	RNA binding
K	0005730	cellular_component	nucleolus
K	0006364	biological_process	rRNA processing
K	0030490	biological_process	maturation of SSU-rRNA
K	0030684	cellular_component	preribosome
K	0042254	biological_process	ribosome biogenesis
K	1902626	biological_process	assembly of large subunit precursor of preribosome
L	0002181	biological_process	cytoplasmic translation
L	0003723	molecular_function	RNA binding
L	0003735	molecular_function	structural constituent of ribosome
L	0005737	cellular_component	cytoplasm
L	0005829	cellular_component	cytosol
L	0005840	cellular_component	ribosome
L	0006412	biological_process	translation
L	0022625	cellular_component	cytosolic large ribosomal subunit
L	0030684	cellular_component	preribosome
L	1990904	cellular_component	ribonucleoprotein complex
m	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
m	0000466	biological_process	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
m	0003674	molecular_function	molecular_function
m	0005634	cellular_component	nucleus
m	0005654	cellular_component	nucleoplasm
m	0005730	cellular_component	nucleolus
m	0006364	biological_process	rRNA processing
m	0030684	cellular_component	preribosome
m	0030687	cellular_component	preribosome, large subunit precursor
m	0042254	biological_process	ribosome biogenesis
m	0042273	biological_process	ribosomal large subunit biogenesis
m	0043021	molecular_function	ribonucleoprotein complex binding
m	0070545	cellular_component	PeBoW complex
m	1902626	biological_process	assembly of large subunit precursor of preribosome
M	0002181	biological_process	cytoplasmic translation
M	0003723	molecular_function	RNA binding
M	0003735	molecular_function	structural constituent of ribosome
M	0005634	cellular_component	nucleus
M	0005737	cellular_component	cytoplasm
M	0005829	cellular_component	cytosol
M	0005840	cellular_component	ribosome
M	0006412	biological_process	translation
M	0022625	cellular_component	cytosolic large ribosomal subunit
M	0030684	cellular_component	preribosome
M	0032991	cellular_component	protein-containing complex
M	0042273	biological_process	ribosomal large subunit biogenesis
M	1990904	cellular_component	ribonucleoprotein complex
N	0002181	biological_process	cytoplasmic translation
N	0003723	molecular_function	RNA binding
N	0003735	molecular_function	structural constituent of ribosome
N	0005634	cellular_component	nucleus
N	0005730	cellular_component	nucleolus
N	0005737	cellular_component	cytoplasm
N	0005840	cellular_component	ribosome
N	0006412	biological_process	translation
N	0022625	cellular_component	cytosolic large ribosomal subunit
N	0030684	cellular_component	preribosome
N	1990904	cellular_component	ribonucleoprotein complex
o	0003676	molecular_function	nucleic acid binding
o	0003723	molecular_function	RNA binding
o	0005730	cellular_component	nucleolus
o	0030684	cellular_component	preribosome
o	1902626	biological_process	assembly of large subunit precursor of preribosome
O	0002181	biological_process	cytoplasmic translation
O	0003729	molecular_function	mRNA binding
O	0003735	molecular_function	structural constituent of ribosome
O	0005737	cellular_component	cytoplasm
O	0005829	cellular_component	cytosol
O	0005840	cellular_component	ribosome
O	0006412	biological_process	translation
O	0015934	cellular_component	large ribosomal subunit
O	0017148	biological_process	negative regulation of translation
O	0022625	cellular_component	cytosolic large ribosomal subunit
O	0030684	cellular_component	preribosome
O	1990904	cellular_component	ribonucleoprotein complex
P	0002181	biological_process	cytoplasmic translation
P	0003735	molecular_function	structural constituent of ribosome
P	0005737	cellular_component	cytoplasm
P	0005829	cellular_component	cytosol
P	0005840	cellular_component	ribosome
P	0006412	biological_process	translation
P	0015934	cellular_component	large ribosomal subunit
P	0022625	cellular_component	cytosolic large ribosomal subunit
P	0030684	cellular_component	preribosome
P	1990904	cellular_component	ribonucleoprotein complex
Q	0002181	biological_process	cytoplasmic translation
Q	0003723	molecular_function	RNA binding
Q	0003735	molecular_function	structural constituent of ribosome
Q	0005737	cellular_component	cytoplasm
Q	0005829	cellular_component	cytosol
Q	0005840	cellular_component	ribosome
Q	0006412	biological_process	translation
Q	0022625	cellular_component	cytosolic large ribosomal subunit
Q	0030684	cellular_component	preribosome
Q	1990904	cellular_component	ribonucleoprotein complex
r	0000460	biological_process	maturation of 5.8S rRNA
r	0000470	biological_process	maturation of LSU-rRNA
r	0003674	molecular_function	molecular_function
r	0005634	cellular_component	nucleus
r	0005730	cellular_component	nucleolus
r	0006364	biological_process	rRNA processing
r	0030684	cellular_component	preribosome
r	0030687	cellular_component	preribosome, large subunit precursor
r	0042254	biological_process	ribosome biogenesis
r	0042273	biological_process	ribosomal large subunit biogenesis
r	1902626	biological_process	assembly of large subunit precursor of preribosome
r	1990904	cellular_component	ribonucleoprotein complex
S	0002181	biological_process	cytoplasmic translation
S	0003735	molecular_function	structural constituent of ribosome
S	0005737	cellular_component	cytoplasm
S	0005829	cellular_component	cytosol
S	0005840	cellular_component	ribosome
S	0006412	biological_process	translation
S	0022625	cellular_component	cytosolic large ribosomal subunit
S	0030684	cellular_component	preribosome
S	1990904	cellular_component	ribonucleoprotein complex
t	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
t	0003723	molecular_function	RNA binding
t	0003735	molecular_function	structural constituent of ribosome
t	0005730	cellular_component	nucleolus
t	0005737	cellular_component	cytoplasm
t	0005840	cellular_component	ribosome
t	0022625	cellular_component	cytosolic large ribosomal subunit
t	0030684	cellular_component	preribosome
t	0030687	cellular_component	preribosome, large subunit precursor
t	1902626	biological_process	assembly of large subunit precursor of preribosome
t	1990904	cellular_component	ribonucleoprotein complex
T	0002181	biological_process	cytoplasmic translation
T	0003735	molecular_function	structural constituent of ribosome
T	0005737	cellular_component	cytoplasm
T	0005829	cellular_component	cytosol
T	0005840	cellular_component	ribosome
T	0006412	biological_process	translation
T	0022625	cellular_component	cytosolic large ribosomal subunit
T	0030684	cellular_component	preribosome
T	1990904	cellular_component	ribonucleoprotein complex
u	0003735	molecular_function	structural constituent of ribosome
u	0005634	cellular_component	nucleus
u	0005730	cellular_component	nucleolus
u	0005737	cellular_component	cytoplasm
u	0030684	cellular_component	preribosome
u	0030687	cellular_component	preribosome, large subunit precursor
u	0042254	biological_process	ribosome biogenesis
u	0042273	biological_process	ribosomal large subunit biogenesis
u	1902626	biological_process	assembly of large subunit precursor of preribosome
v	0003674	molecular_function	molecular_function
v	0005634	cellular_component	nucleus
v	0005730	cellular_component	nucleolus
v	0006364	biological_process	rRNA processing
v	0030684	cellular_component	preribosome
v	0030687	cellular_component	preribosome, large subunit precursor
v	0042254	biological_process	ribosome biogenesis
v	0042273	biological_process	ribosomal large subunit biogenesis
v	1902626	biological_process	assembly of large subunit precursor of preribosome
v	1990904	cellular_component	ribonucleoprotein complex
V	0002181	biological_process	cytoplasmic translation
V	0003735	molecular_function	structural constituent of ribosome
V	0005634	cellular_component	nucleus
V	0005737	cellular_component	cytoplasm
V	0005840	cellular_component	ribosome
V	0006412	biological_process	translation
V	0022625	cellular_component	cytosolic large ribosomal subunit
V	0030684	cellular_component	preribosome
V	0070180	molecular_function	large ribosomal subunit rRNA binding
V	1990904	cellular_component	ribonucleoprotein complex
x	0000460	biological_process	maturation of 5.8S rRNA
x	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
x	0000466	biological_process	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
x	0000470	biological_process	maturation of LSU-rRNA
x	0005634	cellular_component	nucleus
x	0005730	cellular_component	nucleolus
x	0005732	cellular_component	sno(s)RNA-containing ribonucleoprotein complex
x	0006364	biological_process	rRNA processing
x	0019843	molecular_function	rRNA binding
x	0030684	cellular_component	preribosome
x	0030687	cellular_component	preribosome, large subunit precursor
x	0042134	molecular_function	rRNA primary transcript binding
x	0042254	biological_process	ribosome biogenesis
x	0180023	biological_process	cytosolic large ribosomal subunit assembly
x	1902626	biological_process	assembly of large subunit precursor of preribosome
y	0000054	biological_process	ribosomal subunit export from nucleus
y	0000460	biological_process	maturation of 5.8S rRNA
y	0000470	biological_process	maturation of LSU-rRNA
y	0003743	molecular_function	translation initiation factor activity
y	0005634	cellular_component	nucleus
y	0005730	cellular_component	nucleolus
y	0005737	cellular_component	cytoplasm
y	0005829	cellular_component	cytosol
y	0006412	biological_process	translation
y	0006413	biological_process	translational initiation
y	0030684	cellular_component	preribosome
y	0042254	biological_process	ribosome biogenesis
y	0042256	biological_process	cytosolic ribosome assembly
y	0042273	biological_process	ribosomal large subunit biogenesis
y	0043022	molecular_function	ribosome binding
y	0043023	molecular_function	ribosomal large subunit binding
y	1902626	biological_process	assembly of large subunit precursor of preribosome
Y	0002181	biological_process	cytoplasmic translation
Y	0003723	molecular_function	RNA binding
Y	0003735	molecular_function	structural constituent of ribosome
Y	0005634	cellular_component	nucleus
Y	0005730	cellular_component	nucleolus
Y	0005737	cellular_component	cytoplasm
Y	0005829	cellular_component	cytosol
Y	0005840	cellular_component	ribosome
Y	0006412	biological_process	translation
Y	0015934	cellular_component	large ribosomal subunit
Y	0022625	cellular_component	cytosolic large ribosomal subunit
Y	0030684	cellular_component	preribosome
Y	0032991	cellular_component	protein-containing complex
Y	0042273	biological_process	ribosomal large subunit biogenesis
Y	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PROSITE/UniProt

site_id	PS00039
Number of Residues	9
Details	DEAD_ATP_HELICASE DEAD-box subfamily ATP-dependent helicases signature. VIDEADRiL

Chain	Residue	Details
D	VAL241-LEU249

---

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AIVVrqrkawrrk.DGvylyFedNagVI

Chain	Residue	Details
V	ALA78-ILE104

---

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRvtaylsspSHIEIiV

Chain	Residue	Details
P	ARG126-VAL150

---

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FeqnemiDviGvTrGKGneGttaR

Chain	Residue	Details
B	PHE209-ARG232

---

site_id	PS00579
Number of Residues	15
Details	RIBOSOMAL_L29 Ribosomal protein L29 signature. KLSKIKtTRKDIARI

Chain	Residue	Details
h	LYS42-ILE56

---

site_id	PS00580
Number of Residues	21
Details	RIBOSOMAL_L32E Ribosomal protein L32e signature. FkRhqsdRfkRVges..WRKprG

Chain	Residue	Details
e	PHE14-GLY34

---

site_id	PS00678
Number of Residues	15
Details	WD_REPEATS_1 Trp-Asp (WD) repeats signature. LASGgdDgVLRIWEV

Chain	Residue	Details
m	LEU398-VAL412

---

site_id	PS00700
Number of Residues	22
Details	RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QicnVrnKdiRkFlDGIYVseR

Chain	Residue	Details
H	GLN161-ARG182

---

site_id	PS00783
Number of Residues	24
Details	RIBOSOMAL_L13 Ribosomal protein L13 signature. VRGMLPhktarGQaalehLqAVeG

Chain	Residue	Details
O	VAL85-GLY108

---

site_id	PS00939
Number of Residues	27
Details	RIBOSOMAL_L1E Ribosomal protein L1e signature. NqneKryAIaSAVaASGvpslllaRGH

Chain	Residue	Details
C	ASN116-HIS142

---

site_id	PS01073
Number of Residues	18
Details	RIBOSOMAL_L24E Ribosomal protein L24e signature. FcSgpVyPGhGimFvRnD

Chain	Residue	Details
u	PHE8-ASP25

---

site_id	PS01077
Number of Residues	20
Details	RIBOSOMAL_L37E Ribosomal protein L37e signature. GTqSfGmRhnks.HtiCrRCG

Chain	Residue	Details
j	GLY4-GLY23

---

site_id	PS01082
Number of Residues	18
Details	RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CkkmgVPYaiVkNKarLG

Chain	Residue	Details
G	CYS170-GLY187

---

site_id	PS01104
Number of Residues	15
Details	RIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFTLeELkaaG

Chain	Residue	Details
L	ARG70-GLY84

---

site_id	PS01105
Number of Residues	22
Details	RIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GTIaRpHGnsGaVrArFvhnLP

Chain	Residue	Details
f	GLY70-PRO91

---

site_id	PS01106
Number of Residues	18
Details	RIBOSOMAL_L18E Ribosomal protein L18e signature. KrLfqSKtnRPpISIsKI

Chain	Residue	Details
Q	LYS49-ILE66

---

site_id	PS01108
Number of Residues	18
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. DDqItVIrGsnKGre.GkI

Chain	Residue	Details
Y	ASP52-ILE69

---

site_id	PS01170
Number of Residues	20
Details	RIBOSOMAL_L6E Ribosomal protein L6e signature. NgvPIRRvnhrYVIATSapK

Chain	Residue	Details
E	ASN89-LYS108

---

site_id	PS01171
Number of Residues	26
Details	RIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikvngavqk.GmpHkyYhGkTG

Chain	Residue	Details
T	GLY37-GLY62

---

site_id	PS01190
Number of Residues	11
Details	RIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRvMELIR

Chain	Residue	Details
i	PRO50-ARG60

---

site_id	PS01194
Number of Residues	24
Details	RIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGYVIYRiRVrRG

Chain	Residue	Details
N	ASP46-GLY69

---

site_id	PS00430
Number of Residues	85
Details	TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mstvkvngaknggermvlpageaaakyypayrenvpkkarkavrptklraslapgtvcillagrfrgkrvvvlsqle......................................DTLVVTGP

Chain	Residue	Details
E	MET1-PRO85

---

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. VLrlLrLsRinNaVfvrnnkavaqMLriVepYV

Chain	Residue	Details
t	VAL108-VAL140
F	ILE109-VAL141

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	5
Details	Motif: {"description":"Nuclear localization signal","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	38
Details	Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	15
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18257517","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	83
Details	Region: {"description":"C-terminal-extended nuclear localization signal","evidences":[{"source":"UniProtKB","id":"P49626","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	3
Details	Motif: {"description":"DEAD box"}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	16
Details	Motif: {"description":"Bipartite nuclear localization signal","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	7
Details	Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00541","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI8
Number of Residues	4
Details	Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"18257517","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI11
Number of Residues	18
Details	Zinc finger: {"description":"C4-type","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI12
Number of Residues	4
Details	Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI13
Number of Residues	78
Details	Domain: {"description":"RRM","evidences":[{"source":"PROSITE-ProRule","id":"PRU00176","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI14
Number of Residues	7
Details	Motif: {"description":"Nuclear localization signal","evidences":[{"source":"PROSITE-ProRule","id":"PRU00768","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI15
Number of Residues	189
Details	Domain: {"description":"Brix","evidences":[{"source":"PROSITE-ProRule","id":"PRU00034","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI16
Number of Residues	21
Details	Compositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI17
Number of Residues	2
Details	Modified residue: {"description":"Phosphoserine; by CK1","evidences":[{"source":"HAMAP-Rule","id":"MF_03132","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---