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8BTT

Structure of human RTCB

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000394biological_processRNA splicing, via endonucleolytic cleavage and ligation
A0000968biological_processtRNA exon ligation
A0001701biological_processin utero embryonic development
A0001890biological_processplacenta development
A0003723molecular_functionRNA binding
A0005515molecular_functionprotein binding
A0005525molecular_functionGTP binding
A0005634cellular_componentnucleus
A0005635cellular_componentnuclear envelope
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005789cellular_componentendoplasmic reticulum membrane
A0005829cellular_componentcytosol
A0006388biological_processtRNA splicing, via endonucleolytic cleavage and ligation
A0006396biological_processRNA processing
A0008033biological_processtRNA processing
A0008452molecular_functionRNA ligase activity
A0016874molecular_functionligase activity
A0016886molecular_functionligase activity, forming phosphoric ester bonds
A0017166molecular_functionvinculin binding
A0036498biological_processIRE1-mediated unfolded protein response
A0044600molecular_functionprotein guanylyltransferase activity
A0046872molecular_functionmetal ion binding
A0070054biological_processmRNA splicing, via endonucleolytic cleavage and ligation
A0072669cellular_componenttRNA-splicing ligase complex
A0170057molecular_functionRNA ligase (GTP) activity
A1902494cellular_componentcatalytic complex
B0000166molecular_functionnucleotide binding
B0000394biological_processRNA splicing, via endonucleolytic cleavage and ligation
B0000968biological_processtRNA exon ligation
B0001701biological_processin utero embryonic development
B0001890biological_processplacenta development
B0003723molecular_functionRNA binding
B0005515molecular_functionprotein binding
B0005525molecular_functionGTP binding
B0005634cellular_componentnucleus
B0005635cellular_componentnuclear envelope
B0005654cellular_componentnucleoplasm
B0005737cellular_componentcytoplasm
B0005789cellular_componentendoplasmic reticulum membrane
B0005829cellular_componentcytosol
B0006388biological_processtRNA splicing, via endonucleolytic cleavage and ligation
B0006396biological_processRNA processing
B0008033biological_processtRNA processing
B0008452molecular_functionRNA ligase activity
B0016874molecular_functionligase activity
B0016886molecular_functionligase activity, forming phosphoric ester bonds
B0017166molecular_functionvinculin binding
B0036498biological_processIRE1-mediated unfolded protein response
B0044600molecular_functionprotein guanylyltransferase activity
B0046872molecular_functionmetal ion binding
B0070054biological_processmRNA splicing, via endonucleolytic cleavage and ligation
B0072669cellular_componenttRNA-splicing ligase complex
B0170057molecular_functionRNA ligase (GTP) activity
B1902494cellular_componentcatalytic complex
Functional Information from PROSITE/UniProt
site_idPS01288
Number of Residues30
DetailsUPF0027 Uncharacterized protein family UPF0027 signature. QIgNvAaLPgIvhrsigLPDvHsGyGfaIG
ChainResidueDetails
AGLN68-GLY97

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"GMP-histidine intermediate","evidences":[{"source":"UniProtKB","id":"O59245","evidenceCode":"ECO:0000250"},{"source":"HAMAP-Rule","id":"MF_03144","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues36
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"O59245","evidenceCode":"ECO:0000250"},{"source":"HAMAP-Rule","id":"MF_03144","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

243531

PDB entries from 2025-10-22

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