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8BTT

Structure of human RTCB

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2016-06-23
DetectorDECTRIS PILATUS3 X 6M
Wavelength(s)1.0332
Spacegroup nameI 4
Unit cell lengths215.640, 215.640, 46.870
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.220 - 2.600
R-factor0.202
Rwork0.199
R-free0.25560
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Alphafold model for Q9Y3I0
RMSD bond length0.003
RMSD bond angle0.517
Data reduction softwareXDS (20210205)
Data scaling softwareAimless (1.12.10)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.2202.720
High resolution limit [Å]2.6002.600
Rmerge0.184
Rpim0.0770.875
Number of reflections337774030
<I/σ(I)>8.50.9
Completeness [%]100.0
Redundancy6.7
CC(1/2)0.9950.348
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7293.15protein: 125 uM in 25 mM Tris pH 7.5, 200 mM NaCl, 10 % glycerol, 1mM TCEP, 2 mM manganese chloride reservoir: 0.1 M magnesium chloride, 0.1 M HEPES pH 7.0, 15 % PEG 4000 drop: 800 nl protein + 600 nl reservoir

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