Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

8BHF

Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
a1	0003735	molecular_function	structural constituent of ribosome
a1	0005737	cellular_component	cytoplasm
a1	0005840	cellular_component	ribosome
a1	0006412	biological_process	translation
a1	1990904	cellular_component	ribonucleoprotein complex
A1	0002181	biological_process	cytoplasmic translation
A1	0003723	molecular_function	RNA binding
A1	0003735	molecular_function	structural constituent of ribosome
A1	0005737	cellular_component	cytoplasm
A1	0005840	cellular_component	ribosome
A1	0006412	biological_process	translation
A1	0022625	cellular_component	cytosolic large ribosomal subunit
A1	0022626	cellular_component	cytosolic ribosome
A1	0044391	cellular_component	ribosomal subunit
A1	1990904	cellular_component	ribonucleoprotein complex
b1	0003735	molecular_function	structural constituent of ribosome
b1	0005840	cellular_component	ribosome
b1	0006412	biological_process	translation
B1	0003735	molecular_function	structural constituent of ribosome
B1	0005840	cellular_component	ribosome
B1	0006412	biological_process	translation
B1	0015934	cellular_component	large ribosomal subunit
b3	0003735	molecular_function	structural constituent of ribosome
b3	0005840	cellular_component	ribosome
b3	0006412	biological_process	translation
B3	0003735	molecular_function	structural constituent of ribosome
B3	0005840	cellular_component	ribosome
B3	0006412	biological_process	translation
B3	0015935	cellular_component	small ribosomal subunit
c1	0003735	molecular_function	structural constituent of ribosome
c1	0005737	cellular_component	cytoplasm
c1	0005840	cellular_component	ribosome
c1	0006412	biological_process	translation
c1	0022625	cellular_component	cytosolic large ribosomal subunit
c1	0046872	molecular_function	metal ion binding
c1	1990904	cellular_component	ribonucleoprotein complex
C1	0003735	molecular_function	structural constituent of ribosome
C1	0005840	cellular_component	ribosome
C1	0006412	biological_process	translation
C1	0015934	cellular_component	large ribosomal subunit
c3	0000028	biological_process	ribosomal small subunit assembly
c3	0003723	molecular_function	RNA binding
c3	0003735	molecular_function	structural constituent of ribosome
c3	0005634	cellular_component	nucleus
c3	0005730	cellular_component	nucleolus
c3	0005737	cellular_component	cytoplasm
c3	0005829	cellular_component	cytosol
c3	0005840	cellular_component	ribosome
c3	0006412	biological_process	translation
c3	0022626	cellular_component	cytosolic ribosome
c3	0022627	cellular_component	cytosolic small ribosomal subunit
c3	0046872	molecular_function	metal ion binding
c3	1990904	cellular_component	ribonucleoprotein complex
C3	0003735	molecular_function	structural constituent of ribosome
C3	0005840	cellular_component	ribosome
C3	0006412	biological_process	translation
d1	0003735	molecular_function	structural constituent of ribosome
d1	0005737	cellular_component	cytoplasm
d1	0005840	cellular_component	ribosome
d1	0006412	biological_process	translation
d1	0022625	cellular_component	cytosolic large ribosomal subunit
d1	1990904	cellular_component	ribonucleoprotein complex
D1	0003735	molecular_function	structural constituent of ribosome
D1	0005840	cellular_component	ribosome
D1	0006412	biological_process	translation
d3	0000028	biological_process	ribosomal small subunit assembly
d3	0002181	biological_process	cytoplasmic translation
d3	0003735	molecular_function	structural constituent of ribosome
d3	0005634	cellular_component	nucleus
d3	0005730	cellular_component	nucleolus
d3	0005737	cellular_component	cytoplasm
d3	0005783	cellular_component	endoplasmic reticulum
d3	0005791	cellular_component	rough endoplasmic reticulum
d3	0005829	cellular_component	cytosol
d3	0005840	cellular_component	ribosome
d3	0006364	biological_process	rRNA processing
d3	0006412	biological_process	translation
d3	0022626	cellular_component	cytosolic ribosome
d3	0022627	cellular_component	cytosolic small ribosomal subunit
d3	0030490	biological_process	maturation of SSU-rRNA
d3	0032040	cellular_component	small-subunit processome
d3	0042254	biological_process	ribosome biogenesis
d3	0042274	biological_process	ribosomal small subunit biogenesis
d3	0045202	cellular_component	synapse
d3	1990904	cellular_component	ribonucleoprotein complex
D3	0003723	molecular_function	RNA binding
D3	0003735	molecular_function	structural constituent of ribosome
D3	0005840	cellular_component	ribosome
D3	0006412	biological_process	translation
D3	0015935	cellular_component	small ribosomal subunit
E1	0003723	molecular_function	RNA binding
E1	0003735	molecular_function	structural constituent of ribosome
E1	0005737	cellular_component	cytoplasm
E1	0005840	cellular_component	ribosome
E1	0006412	biological_process	translation
E1	0022625	cellular_component	cytosolic large ribosomal subunit
E1	1990904	cellular_component	ribonucleoprotein complex
e3	0003735	molecular_function	structural constituent of ribosome
e3	0005737	cellular_component	cytoplasm
e3	0005783	cellular_component	endoplasmic reticulum
e3	0005791	cellular_component	rough endoplasmic reticulum
e3	0005829	cellular_component	cytosol
e3	0005840	cellular_component	ribosome
e3	0006412	biological_process	translation
e3	0008270	molecular_function	zinc ion binding
e3	0022626	cellular_component	cytosolic ribosome
e3	0022627	cellular_component	cytosolic small ribosomal subunit
e3	0046872	molecular_function	metal ion binding
e3	1990904	cellular_component	ribonucleoprotein complex
E3	0003677	molecular_function	DNA binding
E3	0003723	molecular_function	RNA binding
E3	0003735	molecular_function	structural constituent of ribosome
E3	0003906	molecular_function	DNA-(apurinic or apyrimidinic site) endonuclease activity
E3	0005634	cellular_component	nucleus
E3	0005730	cellular_component	nucleolus
E3	0005737	cellular_component	cytoplasm
E3	0005739	cellular_component	mitochondrion
E3	0005743	cellular_component	mitochondrial inner membrane
E3	0005819	cellular_component	spindle
E3	0005840	cellular_component	ribosome
E3	0005856	cellular_component	cytoskeleton
E3	0006281	biological_process	DNA repair
E3	0006412	biological_process	translation
E3	0006417	biological_process	regulation of translation
E3	0006915	biological_process	apoptotic process
E3	0015935	cellular_component	small ribosomal subunit
E3	0016829	molecular_function	lyase activity
E3	0022626	cellular_component	cytosolic ribosome
E3	0022627	cellular_component	cytosolic small ribosomal subunit
E3	0031334	biological_process	positive regulation of protein-containing complex assembly
E3	0045202	cellular_component	synapse
E3	0051301	biological_process	cell division
E3	0140078	molecular_function	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
E3	1990904	cellular_component	ribonucleoprotein complex
E3	2001235	biological_process	positive regulation of apoptotic signaling pathway
f1	0003723	molecular_function	RNA binding
f1	0003735	molecular_function	structural constituent of ribosome
f1	0005737	cellular_component	cytoplasm
f1	0005840	cellular_component	ribosome
f1	0006412	biological_process	translation
f1	0022625	cellular_component	cytosolic large ribosomal subunit
f1	0070180	molecular_function	large ribosomal subunit rRNA binding
f1	1990904	cellular_component	ribonucleoprotein complex
F1	0003735	molecular_function	structural constituent of ribosome
F1	0005840	cellular_component	ribosome
F1	0006412	biological_process	translation
f3	0003735	molecular_function	structural constituent of ribosome
f3	0005840	cellular_component	ribosome
f3	0006412	biological_process	translation
F3	0003723	molecular_function	RNA binding
F3	0003735	molecular_function	structural constituent of ribosome
F3	0005634	cellular_component	nucleus
F3	0005730	cellular_component	nucleolus
F3	0005737	cellular_component	cytoplasm
F3	0005840	cellular_component	ribosome
F3	0006412	biological_process	translation
F3	0019843	molecular_function	rRNA binding
F3	0022626	cellular_component	cytosolic ribosome
F3	0022627	cellular_component	cytosolic small ribosomal subunit
F3	1990904	cellular_component	ribonucleoprotein complex
G1	0003735	molecular_function	structural constituent of ribosome
G1	0005737	cellular_component	cytoplasm
G1	0005783	cellular_component	endoplasmic reticulum
G1	0005829	cellular_component	cytosol
G1	0005840	cellular_component	ribosome
G1	0006412	biological_process	translation
G1	0022625	cellular_component	cytosolic large ribosomal subunit
G1	1990904	cellular_component	ribonucleoprotein complex
g3	0003735	molecular_function	structural constituent of ribosome
g3	0005840	cellular_component	ribosome
g3	0006412	biological_process	translation
G3	0000028	biological_process	ribosomal small subunit assembly
G3	0003723	molecular_function	RNA binding
G3	0003729	molecular_function	mRNA binding
G3	0003735	molecular_function	structural constituent of ribosome
G3	0005634	cellular_component	nucleus
G3	0005730	cellular_component	nucleolus
G3	0005737	cellular_component	cytoplasm
G3	0005840	cellular_component	ribosome
G3	0006412	biological_process	translation
G3	0015935	cellular_component	small ribosomal subunit
G3	0019843	molecular_function	rRNA binding
G3	0022626	cellular_component	cytosolic ribosome
G3	0022627	cellular_component	cytosolic small ribosomal subunit
G3	1990904	cellular_component	ribonucleoprotein complex
H1	0003735	molecular_function	structural constituent of ribosome
H1	0005840	cellular_component	ribosome
H1	0006412	biological_process	translation
h3	0001891	cellular_component	phagocytic cup
h3	0001934	biological_process	positive regulation of protein phosphorylation
h3	0005080	molecular_function	protein kinase C binding
h3	0005634	cellular_component	nucleus
h3	0005737	cellular_component	cytoplasm
h3	0005829	cellular_component	cytosol
h3	0005840	cellular_component	ribosome
h3	0005886	cellular_component	plasma membrane
h3	0006417	biological_process	regulation of translation
h3	0006915	biological_process	apoptotic process
h3	0007369	biological_process	gastrulation
h3	0030425	cellular_component	dendrite
h3	0042995	cellular_component	cell projection
h3	0043022	molecular_function	ribosome binding
h3	0043204	cellular_component	perikaryon
h3	0045182	molecular_function	translation regulator activity
h3	0048471	cellular_component	perinuclear region of cytoplasm
h3	0048511	biological_process	rhythmic process
h3	0072344	biological_process	rescue of stalled ribosome
h3	1990904	cellular_component	ribonucleoprotein complex
H3	0000082	biological_process	G1/S transition of mitotic cell cycle
H3	0000278	biological_process	mitotic cell cycle
H3	0001890	biological_process	placenta development
H3	0002181	biological_process	cytoplasmic translation
H3	0002309	biological_process	T cell proliferation involved in immune response
H3	0003735	molecular_function	structural constituent of ribosome
H3	0005634	cellular_component	nucleus
H3	0005730	cellular_component	nucleolus
H3	0005737	cellular_component	cytoplasm
H3	0005783	cellular_component	endoplasmic reticulum
H3	0005829	cellular_component	cytosol
H3	0005840	cellular_component	ribosome
H3	0006364	biological_process	rRNA processing
H3	0006412	biological_process	translation
H3	0006924	biological_process	activation-induced cell death of T cells
H3	0007369	biological_process	gastrulation
H3	0008284	biological_process	positive regulation of cell population proliferation
H3	0015935	cellular_component	small ribosomal subunit
H3	0019901	molecular_function	protein kinase binding
H3	0022605	biological_process	mammalian oogenesis stage
H3	0022626	cellular_component	cytosolic ribosome
H3	0022627	cellular_component	cytosolic small ribosomal subunit
H3	0030425	cellular_component	dendrite
H3	0031929	biological_process	TOR signaling
H3	0032040	cellular_component	small-subunit processome
H3	0033077	biological_process	T cell differentiation in thymus
H3	0036464	cellular_component	cytoplasmic ribonucleoprotein granule
H3	0042274	biological_process	ribosomal small subunit biogenesis
H3	0042593	biological_process	glucose homeostasis
H3	0043065	biological_process	positive regulation of apoptotic process
H3	0043066	biological_process	negative regulation of apoptotic process
H3	0044297	cellular_component	cell body
H3	0048471	cellular_component	perinuclear region of cytoplasm
H3	0048821	biological_process	erythrocyte development
H3	1990904	cellular_component	ribonucleoprotein complex
I1	0003735	molecular_function	structural constituent of ribosome
I1	0005840	cellular_component	ribosome
I1	0006412	biological_process	translation
I3	0003735	molecular_function	structural constituent of ribosome
I3	0005840	cellular_component	ribosome
I3	0006412	biological_process	translation
j3	0003735	molecular_function	structural constituent of ribosome
j3	0005840	cellular_component	ribosome
j3	0006412	biological_process	translation
J3	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
J3	0003735	molecular_function	structural constituent of ribosome
J3	0005634	cellular_component	nucleus
J3	0005730	cellular_component	nucleolus
J3	0005737	cellular_component	cytoplasm
J3	0005840	cellular_component	ribosome
J3	0006412	biological_process	translation
J3	0016020	cellular_component	membrane
J3	0022626	cellular_component	cytosolic ribosome
J3	0022627	cellular_component	cytosolic small ribosomal subunit
J3	1990904	cellular_component	ribonucleoprotein complex
K1	0003735	molecular_function	structural constituent of ribosome
K1	0005840	cellular_component	ribosome
K1	0006412	biological_process	translation
K1	0019843	molecular_function	rRNA binding
k3	0003723	molecular_function	RNA binding
k3	0003735	molecular_function	structural constituent of ribosome
k3	0005634	cellular_component	nucleus
k3	0005730	cellular_component	nucleolus
k3	0005737	cellular_component	cytoplasm
k3	0005840	cellular_component	ribosome
k3	0006412	biological_process	translation
k3	0022625	cellular_component	cytosolic large ribosomal subunit
k3	1990904	cellular_component	ribonucleoprotein complex
K3	0003723	molecular_function	RNA binding
K3	0003735	molecular_function	structural constituent of ribosome
K3	0005634	cellular_component	nucleus
K3	0005730	cellular_component	nucleolus
K3	0005737	cellular_component	cytoplasm
K3	0005840	cellular_component	ribosome
K3	0006412	biological_process	translation
K3	0015935	cellular_component	small ribosomal subunit
K3	0019843	molecular_function	rRNA binding
K3	0022626	cellular_component	cytosolic ribosome
K3	0022627	cellular_component	cytosolic small ribosomal subunit
K3	0042274	biological_process	ribosomal small subunit biogenesis
K3	0043226	cellular_component	organelle
K3	1990904	cellular_component	ribonucleoprotein complex
l1	0003723	molecular_function	RNA binding
l1	0003735	molecular_function	structural constituent of ribosome
l1	0006412	biological_process	translation
l1	0015934	cellular_component	large ribosomal subunit
L1	0002181	biological_process	cytoplasmic translation
L1	0003723	molecular_function	RNA binding
L1	0003735	molecular_function	structural constituent of ribosome
L1	0005654	cellular_component	nucleoplasm
L1	0005730	cellular_component	nucleolus
L1	0005737	cellular_component	cytoplasm
L1	0005840	cellular_component	ribosome
L1	0006364	biological_process	rRNA processing
L1	0006412	biological_process	translation
L1	0006977	biological_process	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
L1	0015934	cellular_component	large ribosomal subunit
L1	0022625	cellular_component	cytosolic large ribosomal subunit
L1	0022626	cellular_component	cytosolic ribosome
L1	0034644	biological_process	cellular response to UV
L1	0042273	biological_process	ribosomal large subunit biogenesis
L1	0045202	cellular_component	synapse
L1	0045727	biological_process	positive regulation of translation
L1	0048027	molecular_function	mRNA 5'-UTR binding
L1	0071479	biological_process	cellular response to ionizing radiation
L1	0071480	biological_process	cellular response to gamma radiation
L1	1902164	biological_process	positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
L1	1902167	biological_process	positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
L1	1904803	biological_process	regulation of translation involved in cellular response to UV
L1	1990904	cellular_component	ribonucleoprotein complex
l3	0003735	molecular_function	structural constituent of ribosome
l3	0005840	cellular_component	ribosome
l3	0006412	biological_process	translation
M1	0003735	molecular_function	structural constituent of ribosome
M1	0005654	cellular_component	nucleoplasm
M1	0005730	cellular_component	nucleolus
M1	0005737	cellular_component	cytoplasm
M1	0005783	cellular_component	endoplasmic reticulum
M1	0005791	cellular_component	rough endoplasmic reticulum
M1	0005829	cellular_component	cytosol
M1	0005840	cellular_component	ribosome
M1	0006364	biological_process	rRNA processing
M1	0006412	biological_process	translation
M1	0022625	cellular_component	cytosolic large ribosomal subunit
M1	0022626	cellular_component	cytosolic ribosome
M1	1990904	cellular_component	ribonucleoprotein complex
m3	0000027	biological_process	ribosomal large subunit assembly
m3	0003735	molecular_function	structural constituent of ribosome
m3	0005634	cellular_component	nucleus
m3	0005730	cellular_component	nucleolus
m3	0005737	cellular_component	cytoplasm
m3	0005840	cellular_component	ribosome
m3	0006412	biological_process	translation
m3	0008097	molecular_function	5S rRNA binding
m3	0019843	molecular_function	rRNA binding
m3	0022625	cellular_component	cytosolic large ribosomal subunit
m3	1990904	cellular_component	ribonucleoprotein complex
M3	0003735	molecular_function	structural constituent of ribosome
M3	0005634	cellular_component	nucleus
M3	0005730	cellular_component	nucleolus
M3	0005737	cellular_component	cytoplasm
M3	0005840	cellular_component	ribosome
M3	0006412	biological_process	translation
M3	0019843	molecular_function	rRNA binding
M3	0022626	cellular_component	cytosolic ribosome
M3	0022627	cellular_component	cytosolic small ribosomal subunit
M3	1990904	cellular_component	ribonucleoprotein complex
n1	0005634	cellular_component	nucleus
n1	0006355	biological_process	regulation of DNA-templated transcription
n1	0030015	cellular_component	CCR4-NOT core complex
N1	0003735	molecular_function	structural constituent of ribosome
N1	0005737	cellular_component	cytoplasm
N1	0005840	cellular_component	ribosome
N1	0006412	biological_process	translation
N1	0015934	cellular_component	large ribosomal subunit
N1	0022625	cellular_component	cytosolic large ribosomal subunit
N1	0043232	cellular_component	intracellular non-membrane-bounded organelle
N1	1990904	cellular_component	ribonucleoprotein complex
n3	0003735	molecular_function	structural constituent of ribosome
n3	0005840	cellular_component	ribosome
n3	0006412	biological_process	translation
N3	0003735	molecular_function	structural constituent of ribosome
N3	0005840	cellular_component	ribosome
N3	0006412	biological_process	translation
O1	0003735	molecular_function	structural constituent of ribosome
O1	0005840	cellular_component	ribosome
O1	0006412	biological_process	translation
o3	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
o3	0003723	molecular_function	RNA binding
o3	0003735	molecular_function	structural constituent of ribosome
o3	0005737	cellular_component	cytoplasm
o3	0005840	cellular_component	ribosome
o3	0022625	cellular_component	cytosolic large ribosomal subunit
o3	1990904	cellular_component	ribonucleoprotein complex
O3	0003735	molecular_function	structural constituent of ribosome
O3	0005634	cellular_component	nucleus
O3	0005730	cellular_component	nucleolus
O3	0005737	cellular_component	cytoplasm
O3	0005840	cellular_component	ribosome
O3	0006412	biological_process	translation
O3	0022626	cellular_component	cytosolic ribosome
O3	0022627	cellular_component	cytosolic small ribosomal subunit
O3	0070181	molecular_function	small ribosomal subunit rRNA binding
O3	1990904	cellular_component	ribonucleoprotein complex
P1	0003723	molecular_function	RNA binding
p3	0042254	biological_process	ribosome biogenesis
p3	1990904	cellular_component	ribonucleoprotein complex
P3	0000028	biological_process	ribosomal small subunit assembly
P3	0003735	molecular_function	structural constituent of ribosome
P3	0005634	cellular_component	nucleus
P3	0005730	cellular_component	nucleolus
P3	0005737	cellular_component	cytoplasm
P3	0005840	cellular_component	ribosome
P3	0006412	biological_process	translation
P3	0015935	cellular_component	small ribosomal subunit
P3	0022627	cellular_component	cytosolic small ribosomal subunit
P3	1990904	cellular_component	ribonucleoprotein complex
Q1	0003735	molecular_function	structural constituent of ribosome
Q1	0005840	cellular_component	ribosome
Q1	0006412	biological_process	translation
q3	0002181	biological_process	cytoplasmic translation
q3	0003735	molecular_function	structural constituent of ribosome
q3	0005737	cellular_component	cytoplasm
q3	0005840	cellular_component	ribosome
q3	0006412	biological_process	translation
q3	0019843	molecular_function	rRNA binding
q3	0022625	cellular_component	cytosolic large ribosomal subunit
q3	1990904	cellular_component	ribonucleoprotein complex
Q3	0003723	molecular_function	RNA binding
Q3	0003735	molecular_function	structural constituent of ribosome
Q3	0005840	cellular_component	ribosome
Q3	0006412	biological_process	translation
Q3	0015935	cellular_component	small ribosomal subunit
R1	0003735	molecular_function	structural constituent of ribosome
R1	0005737	cellular_component	cytoplasm
R1	0005840	cellular_component	ribosome
R1	0006412	biological_process	translation
R1	0022625	cellular_component	cytosolic large ribosomal subunit
R1	1990904	cellular_component	ribonucleoprotein complex
r3	0000027	biological_process	ribosomal large subunit assembly
r3	0003735	molecular_function	structural constituent of ribosome
r3	0005737	cellular_component	cytoplasm
r3	0005840	cellular_component	ribosome
r3	0006412	biological_process	translation
r3	0006417	biological_process	regulation of translation
r3	0022625	cellular_component	cytosolic large ribosomal subunit
r3	1990904	cellular_component	ribonucleoprotein complex
R3	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
R3	0003723	molecular_function	RNA binding
R3	0003735	molecular_function	structural constituent of ribosome
R3	0005634	cellular_component	nucleus
R3	0005730	cellular_component	nucleolus
R3	0005737	cellular_component	cytoplasm
R3	0005840	cellular_component	ribosome
R3	0006364	biological_process	rRNA processing
R3	0006412	biological_process	translation
R3	0022626	cellular_component	cytosolic ribosome
R3	0022627	cellular_component	cytosolic small ribosomal subunit
R3	0032040	cellular_component	small-subunit processome
R3	0042274	biological_process	ribosomal small subunit biogenesis
R3	0045202	cellular_component	synapse
R3	1990830	biological_process	cellular response to leukemia inhibitory factor
R3	1990904	cellular_component	ribonucleoprotein complex
S1	0000049	molecular_function	tRNA binding
S1	0002181	biological_process	cytoplasmic translation
S1	0003735	molecular_function	structural constituent of ribosome
S1	0005737	cellular_component	cytoplasm
S1	0005840	cellular_component	ribosome
S1	0006412	biological_process	translation
S1	0022625	cellular_component	cytosolic large ribosomal subunit
S1	0042273	biological_process	ribosomal large subunit biogenesis
S1	1990904	cellular_component	ribonucleoprotein complex
s3	0003723	molecular_function	RNA binding
s3	0003735	molecular_function	structural constituent of ribosome
s3	0005634	cellular_component	nucleus
s3	0005730	cellular_component	nucleolus
s3	0005737	cellular_component	cytoplasm
s3	0005840	cellular_component	ribosome
s3	0006412	biological_process	translation
s3	0019843	molecular_function	rRNA binding
s3	0022625	cellular_component	cytosolic large ribosomal subunit
s3	1990904	cellular_component	ribonucleoprotein complex
S3	0003735	molecular_function	structural constituent of ribosome
S3	0005634	cellular_component	nucleus
S3	0005730	cellular_component	nucleolus
S3	0005737	cellular_component	cytoplasm
S3	0005840	cellular_component	ribosome
S3	0006412	biological_process	translation
S3	0022626	cellular_component	cytosolic ribosome
S3	1990904	cellular_component	ribonucleoprotein complex
T1	0003735	molecular_function	structural constituent of ribosome
T1	0005737	cellular_component	cytoplasm
T1	0005783	cellular_component	endoplasmic reticulum
T1	0005829	cellular_component	cytosol
T1	0005840	cellular_component	ribosome
T1	0006412	biological_process	translation
T1	0022625	cellular_component	cytosolic large ribosomal subunit
T1	1990904	cellular_component	ribonucleoprotein complex
t3	0003723	molecular_function	RNA binding
t3	0003735	molecular_function	structural constituent of ribosome
t3	0005737	cellular_component	cytoplasm
t3	0005840	cellular_component	ribosome
t3	0006412	biological_process	translation
t3	0022625	cellular_component	cytosolic large ribosomal subunit
t3	1990904	cellular_component	ribonucleoprotein complex
T3	0003676	molecular_function	nucleic acid binding
T3	0003723	molecular_function	RNA binding
T3	0003735	molecular_function	structural constituent of ribosome
T3	0005737	cellular_component	cytoplasm
T3	0005829	cellular_component	cytosol
T3	0005840	cellular_component	ribosome
T3	0006412	biological_process	translation
T3	0015935	cellular_component	small ribosomal subunit
T3	0019843	molecular_function	rRNA binding
T3	0022626	cellular_component	cytosolic ribosome
T3	1990904	cellular_component	ribonucleoprotein complex
U1	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
U1	0003729	molecular_function	mRNA binding
U1	0003735	molecular_function	structural constituent of ribosome
U1	0005737	cellular_component	cytoplasm
U1	0005840	cellular_component	ribosome
U1	0006412	biological_process	translation
U1	0022625	cellular_component	cytosolic large ribosomal subunit
U1	1990904	cellular_component	ribonucleoprotein complex
u3	0003723	molecular_function	RNA binding
u3	0003735	molecular_function	structural constituent of ribosome
u3	0005840	cellular_component	ribosome
u3	0006412	biological_process	translation
U3	0000028	biological_process	ribosomal small subunit assembly
U3	0003723	molecular_function	RNA binding
U3	0003735	molecular_function	structural constituent of ribosome
U3	0005634	cellular_component	nucleus
U3	0005730	cellular_component	nucleolus
U3	0005737	cellular_component	cytoplasm
U3	0005840	cellular_component	ribosome
U3	0006412	biological_process	translation
U3	0022626	cellular_component	cytosolic ribosome
U3	0022627	cellular_component	cytosolic small ribosomal subunit
U3	1990904	cellular_component	ribonucleoprotein complex
V1	0002181	biological_process	cytoplasmic translation
V1	0003735	molecular_function	structural constituent of ribosome
V1	0005737	cellular_component	cytoplasm
V1	0005840	cellular_component	ribosome
V1	0006412	biological_process	translation
V1	0022625	cellular_component	cytosolic large ribosomal subunit
V1	1990904	cellular_component	ribonucleoprotein complex
V3	0003723	molecular_function	RNA binding
V3	0003735	molecular_function	structural constituent of ribosome
V3	0005840	cellular_component	ribosome
V3	0006412	biological_process	translation
V3	0015935	cellular_component	small ribosomal subunit
W1	0003735	molecular_function	structural constituent of ribosome
W1	0005840	cellular_component	ribosome
W1	0006412	biological_process	translation
W3	0003735	molecular_function	structural constituent of ribosome
W3	0005840	cellular_component	ribosome
W3	0006412	biological_process	translation
X1	0003735	molecular_function	structural constituent of ribosome
X1	0005737	cellular_component	cytoplasm
X1	0005840	cellular_component	ribosome
X1	0006412	biological_process	translation
X1	0022618	biological_process	protein-RNA complex assembly
X1	0022625	cellular_component	cytosolic large ribosomal subunit
X1	1990904	cellular_component	ribonucleoprotein complex
X3	0003735	molecular_function	structural constituent of ribosome
X3	0005634	cellular_component	nucleus
X3	0005730	cellular_component	nucleolus
X3	0005737	cellular_component	cytoplasm
X3	0005840	cellular_component	ribosome
X3	0006412	biological_process	translation
X3	0022626	cellular_component	cytosolic ribosome
X3	0022627	cellular_component	cytosolic small ribosomal subunit
X3	1990904	cellular_component	ribonucleoprotein complex
Y1	0003735	molecular_function	structural constituent of ribosome
Y1	0005840	cellular_component	ribosome
Y1	0006412	biological_process	translation
Y1	0022625	cellular_component	cytosolic large ribosomal subunit
Y1	1990904	cellular_component	ribonucleoprotein complex
Y3	0003735	molecular_function	structural constituent of ribosome
Y3	0005634	cellular_component	nucleus
Y3	0005730	cellular_component	nucleolus
Y3	0005737	cellular_component	cytoplasm
Y3	0005783	cellular_component	endoplasmic reticulum
Y3	0005791	cellular_component	rough endoplasmic reticulum
Y3	0005829	cellular_component	cytosol
Y3	0005840	cellular_component	ribosome
Y3	0006412	biological_process	translation
Y3	0015935	cellular_component	small ribosomal subunit
Y3	0022626	cellular_component	cytosolic ribosome
Y3	0022627	cellular_component	cytosolic small ribosomal subunit
Y3	1990904	cellular_component	ribonucleoprotein complex
Z1	0003735	molecular_function	structural constituent of ribosome
Z1	0005840	cellular_component	ribosome
Z1	0006412	biological_process	translation
Z3	0003735	molecular_function	structural constituent of ribosome
Z3	0005840	cellular_component	ribosome
Z3	0006412	biological_process	translation
Z3	0044391	cellular_component	ribosomal subunit
Z3	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PROSITE/UniProt

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AVVIrqrksyrrk.DGvflyFedNagVI

Chain	Residue	Details
I1	ALA79-ILE105

site_id	PS00050
Number of Residues	16
Details	RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLApdydaldV

Chain	Residue	Details
K1	LYS134-VAL149

site_id	PS00051
Number of Residues	17
Details	RIBOSOMAL_L39E Ribosomal protein L39e signature. KTgnkIryNskrRHWRR

Chain	Residue	Details
Y1	LYS30-ARG46

site_id	PS00052
Number of Residues	27
Details	RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsMMmhgrnnGKKlmtvrIVkhA

Chain	Residue	Details
G3	GLU70-ALA96

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GfiVLTTSaGIMdheeAR

Chain	Residue	Details
X3	GLY100-ARG117

site_id	PS00054
Number of Residues	23
Details	RIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GMkIgrieDvTPiPSD

Chain	Residue	Details
P3	LEU116-ASP138

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR

Chain	Residue	Details
Y3	LYS60-ARG67

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgEcRPLS

Chain	Residue	Details
M3	GLY123-SER135

site_id	PS00323
Number of Residues	25
Details	RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKtfnqveIkpemIGhyLGEFsiT

Chain	Residue	Details
Q3	ASN98-THR122

site_id	PS00358
Number of Residues	17
Details	RIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLTGQtpVfSkARyT

Chain	Residue	Details
s3	LEU40-THR56

site_id	PS00359
Number of Residues	16
Details	RIBOSOMAL_L11 Ribosomal protein L11 signature. KeIlGTaqSVGcNVdG

Chain	Residue	Details
f1	LYS130-GLY145

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvAQiyAirqSiSKAL

Chain	Residue	Details
R3	GLY74-LEU92

site_id	PS00361
Number of Residues	16
Details	RIBOSOMAL_S10 Ribosomal protein S10 signature. AkekNLkvkGPVrMPT

Chain	Residue	Details
V3	ALA43-THR58

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY

Chain	Residue	Details
O3	VAL98-TYR128

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinpymsspCHIEMiL

Chain	Residue	Details
C1	ARG126-LEU150

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PrvRGVAmNPvE

Chain	Residue	Details
j3	PRO197-GLU208

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FgqdemiDviGvTkGKGykGvtsR

Chain	Residue	Details
k3	PHE211-ARG234

site_id	PS00475
Number of Residues	32
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGkGkLpkqp.ViVkakfFSrrAeekIkgvG

Chain	Residue	Details
N1	LYS110-GLY141

site_id	PS00526
Number of Residues	20
Details	RIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaSsvlrCGkkkVWLDP

Chain	Residue	Details
E1	GLN7-PRO26

site_id	PS00527
Number of Residues	23
Details	RIBOSOMAL_S14 Ribosomal protein S14 signature. RvCsnrhglirkyg.LNMCRqCFR

Chain	Residue	Details
e3	ARG22-ARG44

site_id	PS00528
Number of Residues	15
Details	RIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRVAaPkhWmLdK

Chain	Residue	Details
F3	HIS8-LYS22

site_id	PS00529
Number of Residues	23
Details	RIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKTtGFGmIYDSldyakknE

Chain	Residue	Details
Z3	PHE64-GLU86

site_id	PS00548
Number of Residues	37
Details	RIBOSOMAL_S3 Ribosomal protein S3 signature. AKsmkfvdGlMihSgdpVnyyVDtavrhvlLrqGvlG

Chain	Residue	Details
E3	ALA147-GLY183

site_id	PS00578
Number of Residues	12
Details	RIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM

Chain	Residue	Details
H3	ILE52-MET63

site_id	PS00579
Number of Residues	15
Details	RIBOSOMAL_L29 Ribosomal protein L29 signature. KLSKIRvVRKSIARV

Chain	Residue	Details
U1	LYS43-VAL57

site_id	PS00580
Number of Residues	21
Details	RIBOSOMAL_L32E Ribosomal protein L32e signature. FiRhqsdRyvKIkrn..WRKprG

Chain	Residue	Details
R1	PHE20-GLY40

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAfvAIGDyn.GhVGlGvkcsk.EVat.AI

Chain	Residue	Details
D3	GLY119-ILE151

site_id	PS00628
Number of Residues	20
Details	RIBOSOMAL_S19E Ribosomal protein S19e signature. PshfsrgSksVaRrVLQaLE

Chain	Residue	Details
U3	PRO89-GLU108

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVFKlglAkSihhARvLI

Chain	Residue	Details
K3	LEU106-ILE130

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. VLqlLrLrQifNgTfvklnkasinMLriVepYI

Chain	Residue	Details
o3	VAL107-ILE139

site_id	PS00646
Number of Residues	14
Details	RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHfwGlrVRGQ

Chain	Residue	Details
T3	ARG121-GLN134

site_id	PS00678
Number of Residues	15
Details	WD_REPEATS_1 Trp-Asp (WD) repeats signature. ALSGswDgTLRLWDL

Chain	Residue	Details
h3	ALA78-LEU92
h3	ILE120-THR134
h3	ILE165-LEU179
h3	CYS207-LEU221

site_id	PS00687
Number of Residues	8
Details	ALDEHYDE_DEHYDR_GLU Aldehyde dehydrogenases glutamic acid active site. GESSGKNV

Chain	Residue	Details
l3	GLY15-VAL22

site_id	PS00700
Number of Residues	22
Details	RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QattVknKdiRkFlDGIYVseK

Chain	Residue	Details
q3	GLN163-LYS184

site_id	PS00709
Number of Residues	25
Details	RIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkyvlGyKqsLKmiRqGkaKlVIL

Chain	Residue	Details
P1	SER24-LEU48

site_id	PS00712
Number of Residues	16
Details	RIBOSOMAL_S17E Ribosomal protein S17e signature. IpSKkLRNkIAGYvTH

Chain	Residue	Details
S3	ILE41-HIS56

site_id	PS00733
Number of Residues	8
Details	RIBOSOMAL_S26E Ribosomal protein S26e signature. YCVSCAIH

Chain	Residue	Details
b3	TYR73-HIS80

site_id	PS00783
Number of Residues	24
Details	RIBOSOMAL_L13 Ribosomal protein L13 signature. VRGMLPhktkrGQaaldrLkVFdG

Chain	Residue	Details
B1	VAL84-GLY107

site_id	PS00939
Number of Residues	27
Details	RIBOSOMAL_L1E Ribosomal protein L1e signature. NttqKryAIcSALaASAlpalvmsKGH

Chain	Residue	Details
l3	ASN116-HIS142

site_id	PS00948
Number of Residues	14
Details	RIBOSOMAL_S7E Ribosomal protein S7e signature. RLvRELEKKFSgKH

Chain	Residue	Details
I3	ARG78-HIS91

site_id	PS00961
Number of Residues	9
Details	RIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL

Chain	Residue	Details
d3	GLU60-LEU68

site_id	PS00962
Number of Residues	12
Details	RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VlKFLAAGTHLG

Chain	Residue	Details
B3	VAL15-GLY26

site_id	PS00963
Number of Residues	25
Details	RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlLVVtDpraDhqpLtEasyvNLP

Chain	Residue	Details
B3	PRO119-PRO143

site_id	PS00993
Number of Residues	21
Details	RIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTacGKyyrvctLsIiDpG

Chain	Residue	Details
P1	GLU80-GLY100

site_id	PS00996
Number of Residues	9
Details	RIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA

Chain	Residue	Details
W3	LEU11-ALA19

site_id	PS01073
Number of Residues	18
Details	RIBOSOMAL_L24E Ribosomal protein L24e signature. FsGykIyPGhGrrYaRtD

Chain	Residue	Details
J1	PHE8-ASP25

site_id	PS01077
Number of Residues	20
Details	RIBOSOMAL_L37E Ribosomal protein L37e signature. GTsSfGkRrnkt.HtlCrRCG

Chain	Residue	Details
W1	GLY4-GLY23

site_id	PS01082
Number of Residues	18
Details	RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CrkmgVPYciLkGKarLG

Chain	Residue	Details
p3	CYS227-GLY244

site_id	PS01104
Number of Residues	15
Details	RIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFSLeELrvaG

Chain	Residue	Details
t3	ARG71-GLY85

site_id	PS01105
Number of Residues	22
Details	RIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRaHGnsGmVrAkFrsnLP

Chain	Residue	Details
S1	GLY72-PRO93

site_id	PS01106
Number of Residues	18
Details	RIBOSOMAL_L18E Ribosomal protein L18e signature. KrLfmSRtnRPpLSLsRM

Chain	Residue	Details
D1	LYS49-MET66

site_id	PS01107
Number of Residues	12
Details	RIBOSOMAL_L27E Ribosomal protein L27e signature. GKNkWFFqkLRF

Chain	Residue	Details
M1	GLY125-PHE136

site_id	PS01108
Number of Residues	19
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVqVVrGhyKGqqiGkV

Chain	Residue	Details
L1	ASP52-VAL70

site_id	PS01144
Number of Residues	15
Details	RIBOSOMAL_L31E Ribosomal protein L31e signature. VRIDtrLNkAvWaKG

Chain	Residue	Details
Q1	VAL62-GLY76

site_id	PS01145
Number of Residues	14
Details	RIBOSOMAL_L34E Ribosomal protein L34e signature. TaSnKtrlsRTPGN

Chain	Residue	Details
T1	THR15-ASN28

site_id	PS01168
Number of Residues	33
Details	RIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgCykittvFShAqtvvlCvgCStvLcqPtG

Chain	Residue	Details
c3	LYS36-GLY68

site_id	PS01170
Number of Residues	19
Details	RIBOSOMAL_L6E Ribosomal protein L6e signature. NrvPLRRthqkFVIATSt.K

Chain	Residue	Details
n3	ASN185-LYS203

site_id	PS01171
Number of Residues	26
Details	RIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikgmgtvqk.GmpHkcYhGkTG

Chain	Residue	Details
G1	GLY37-GLY62

site_id	PS01172
Number of Residues	12
Details	RIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKivLRleC

Chain	Residue	Details
b1	LYS61-CYS72

site_id	PS01189
Number of Residues	19
Details	RIBOSOMAL_S12E Ribosomal protein S12e signature. ALQevLktAlihDGLarGI

Chain	Residue	Details
N3	ALA17-ILE35

site_id	PS01190
Number of Residues	11
Details	RIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRaMELLK

Chain	Residue	Details
V1	PRO52-LYS62

site_id	PS01191
Number of Residues	13
Details	RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVfEvSLaDL

Chain	Residue	Details
C3	LEU62-LEU74

site_id	PS01193
Number of Residues	20
Details	RIBOSOMAL_S8E Ribosomal protein S8e signature. RrkTGGkrkpy.HkKrKyELG

Chain	Residue	Details
J3	ARG11-GLY30

site_id	PS01194
Number of Residues	24
Details	RIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGYVIYRiRVrRG

Chain	Residue	Details
A1	ASP46-GLY69

site_id	PS01199
Number of Residues	20
Details	RIBOSOMAL_L1 Ribosomal protein L1 signature. IkqIpriLGpgLNKAGkFPS

Chain	Residue	Details
l1	ILE117-SER136

site_id	PS01257
Number of Residues	22
Details	RIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqtGMRgAFGKPqGtvARV

Chain	Residue	Details
r3	ALA108-VAL129

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	MOD_RES: N6-acetyllysine => ECO:0000250\|UniProtKB:P50914

Chain	Residue	Details
u3	LYS79
s3	THR47
h3	THR96
h3	THR277
E3	LEU204

site_id	SWS_FT_FI2
Number of Residues	1
Details	MOD_RES: N6-succinyllysine; alternate => ECO:0000250\|UniProtKB:Q9CR57

Chain	Residue	Details
u3	LYS85
t3	SER106
l3	LYS333
c3	CYS59

site_id	SWS_FT_FI3
Number of Residues	1
Details	MOD_RES: Phosphoserine => ECO:0000250\|UniProtKB:P50914

Chain	Residue	Details
u3	SER139
r3	LYS188
p3	LYS178
p3	LYS298

site_id	SWS_FT_FI4
Number of Residues	2
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0000250\|UniProtKB:P50914

Chain	Residue	Details
u3	LYS124
t3	LYS145
s3	LYS154

site_id	SWS_FT_FI5
Number of Residues	3
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0000250\|UniProtKB:P26373

Chain	Residue	Details
s3	LYS52
t3	LYS174
t3	LYS177

site_id	SWS_FT_FI6
Number of Residues	1
Details	MOD_RES: Phosphoserine => ECO:0000250\|UniProtKB:P50878

Chain	Residue	Details
l3	SER290
O3	LYS43
k3	LYS224
k3	LYS226
k3	LYS386
k3	LYS393

site_id	SWS_FT_FI7
Number of Residues	2
Details	MOD_RES: Phosphoserine => ECO:0000250\|UniProtKB:P36578

Chain	Residue	Details
l3	SER295
l3	SER362

site_id	SWS_FT_FI8
Number of Residues	1
Details	MOD_RES: Citrulline => ECO:0000250\|UniProtKB:Q9D8E6

Chain	Residue	Details
l3	ARG300

site_id	SWS_FT_FI9
Number of Residues	1
Details	MOD_RES: N6-acetyllysine; alternate => ECO:0000250\|UniProtKB:Q9D8E6

Chain	Residue	Details
l3	LYS361

site_id	SWS_FT_FI10
Number of Residues	2
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0000250\|UniProtKB:P36578

Chain	Residue	Details
l3	LYS239
l3	LYS327

site_id	SWS_FT_FI11
Number of Residues	2
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1); alternate => ECO:0000250\|UniProtKB:P36578

Chain	Residue	Details
l3	LYS361

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)