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8BB4

Structure of human WDR5 and pVHL:ElonginC:ElonginB bound to PROTAC with C3 linker

Functional Information from GO Data
ChainGOidnamespacecontents
I0006368biological_processtranscription elongation by RNA polymerase II
I0030891cellular_componentVCB complex
I0070449cellular_componentelongin complex
O0006511biological_processubiquitin-dependent protein catabolic process
Q0000122biological_processnegative regulation of transcription by RNA polymerase II
Q0000123cellular_componenthistone acetyltransferase complex
Q0001501biological_processskeletal system development
Q0005515molecular_functionprotein binding
Q0005634cellular_componentnucleus
Q0005654cellular_componentnucleoplasm
Q0006094biological_processgluconeogenesis
Q0006325biological_processchromatin organization
Q0006355biological_processregulation of DNA-templated transcription
Q0006357biological_processregulation of transcription by RNA polymerase II
Q0035064molecular_functionmethylated histone binding
Q0035097cellular_componenthistone methyltransferase complex
Q0042393molecular_functionhistone binding
Q0042800molecular_functionhistone H3K4 methyltransferase activity
Q0044545cellular_componentNSL complex
Q0044665cellular_componentMLL1/2 complex
Q0044666cellular_componentMLL3/4 complex
Q0045722biological_processpositive regulation of gluconeogenesis
Q0045815biological_processtranscription initiation-coupled chromatin remodeling
Q0045893biological_processpositive regulation of DNA-templated transcription
Q0045995biological_processregulation of embryonic development
Q0048188cellular_componentSet1C/COMPASS complex
Q0051302biological_processregulation of cell division
Q0051726biological_processregulation of cell cycle
Q0071339cellular_componentMLL1 complex
Q0072686cellular_componentmitotic spindle
Q0090043biological_processregulation of tubulin deacetylation
Q0140672cellular_componentATAC complex
Functional Information from PROSITE/UniProt
site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSAsdDkTLKIWDV
ChainResidueDetails
QLEU102-VAL116
QILE144-VAL158
QILE186-THR200
QILE274-LEU288

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsSITE: Important for interaction with histone H3
ChainResidueDetails
QASP107
QPHE133
QPHE263
QGLU322

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
QLYS112

site_idSWS_FT_FI3
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
QLYS46

223532

PDB entries from 2024-08-07

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