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8B9D

Human replisome bound by Pol Alpha

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
20000727biological_processdouble-strand break repair via break-induced replication
20000781cellular_componentchromosome, telomeric region
20000785cellular_componentchromatin
20003677molecular_functionDNA binding
20003688molecular_functionDNA replication origin binding
20003697molecular_functionsingle-stranded DNA binding
20004386molecular_functionhelicase activity
20005515molecular_functionprotein binding
20005524molecular_functionATP binding
20005634cellular_componentnucleus
20005654cellular_componentnucleoplasm
20005664cellular_componentnuclear origin of replication recognition complex
20005694cellular_componentchromosome
20005730cellular_componentnucleolus
20005737cellular_componentcytoplasm
20006259biological_processDNA metabolic process
20006260biological_processDNA replication
20006268biological_processDNA unwinding involved in DNA replication
20006270biological_processDNA replication initiation
20006334biological_processnucleosome assembly
20006915biological_processapoptotic process
20016787molecular_functionhydrolase activity
20016887molecular_functionATP hydrolysis activity
20017116molecular_functionsingle-stranded DNA helicase activity
20019899molecular_functionenzyme binding
20030174biological_processregulation of DNA-templated DNA replication initiation
20032508biological_processDNA duplex unwinding
20042393molecular_functionhistone binding
20042555cellular_componentMCM complex
20043138molecular_function3'-5' DNA helicase activity
20046872molecular_functionmetal ion binding
20071162cellular_componentCMG complex
20071353biological_processcellular response to interleukin-4
20090102biological_processcochlea development
21902975biological_processmitotic DNA replication initiation
21905775biological_processnegative regulation of DNA helicase activity
30000727biological_processdouble-strand break repair via break-induced replication
30000781cellular_componentchromosome, telomeric region
30003677molecular_functionDNA binding
30003697molecular_functionsingle-stranded DNA binding
30004386molecular_functionhelicase activity
30005515molecular_functionprotein binding
30005524molecular_functionATP binding
30005634cellular_componentnucleus
30005654cellular_componentnucleoplasm
30005658cellular_componentalpha DNA polymerase:primase complex
30005694cellular_componentchromosome
30005730cellular_componentnucleolus
30005737cellular_componentcytoplasm
30005813cellular_componentcentrosome
30006259biological_processDNA metabolic process
30006260biological_processDNA replication
30006268biological_processDNA unwinding involved in DNA replication
30006270biological_processDNA replication initiation
30006271biological_processDNA strand elongation involved in DNA replication
30016020cellular_componentmembrane
30016787molecular_functionhydrolase activity
30016887molecular_functionATP hydrolysis activity
30017116molecular_functionsingle-stranded DNA helicase activity
30030174biological_processregulation of DNA-templated DNA replication initiation
30032508biological_processDNA duplex unwinding
30042555cellular_componentMCM complex
30048471cellular_componentperinuclear region of cytoplasm
30071162cellular_componentCMG complex
31902975biological_processmitotic DNA replication initiation
40000727biological_processdouble-strand break repair via break-induced replication
40000781cellular_componentchromosome, telomeric region
40003677molecular_functionDNA binding
40003678molecular_functionDNA helicase activity
40003697molecular_functionsingle-stranded DNA binding
40004386molecular_functionhelicase activity
40005515molecular_functionprotein binding
40005524molecular_functionATP binding
40005634cellular_componentnucleus
40005654cellular_componentnucleoplasm
40005694cellular_componentchromosome
40006259biological_processDNA metabolic process
40006260biological_processDNA replication
40006268biological_processDNA unwinding involved in DNA replication
40006270biological_processDNA replication initiation
40006271biological_processDNA strand elongation involved in DNA replication
40016020cellular_componentmembrane
40016787molecular_functionhydrolase activity
40016887molecular_functionATP hydrolysis activity
40017116molecular_functionsingle-stranded DNA helicase activity
40030174biological_processregulation of DNA-templated DNA replication initiation
40032508biological_processDNA duplex unwinding
40042555cellular_componentMCM complex
40071162cellular_componentCMG complex
41902975biological_processmitotic DNA replication initiation
50000727biological_processdouble-strand break repair via break-induced replication
50000781cellular_componentchromosome, telomeric region
50003677molecular_functionDNA binding
50003688molecular_functionDNA replication origin binding
50003697molecular_functionsingle-stranded DNA binding
50004386molecular_functionhelicase activity
50005515molecular_functionprotein binding
50005524molecular_functionATP binding
50005634cellular_componentnucleus
50005654cellular_componentnucleoplasm
50005694cellular_componentchromosome
50006260biological_processDNA replication
50006268biological_processDNA unwinding involved in DNA replication
50006270biological_processDNA replication initiation
50016020cellular_componentmembrane
50016787molecular_functionhydrolase activity
50016887molecular_functionATP hydrolysis activity
50017116molecular_functionsingle-stranded DNA helicase activity
50030174biological_processregulation of DNA-templated DNA replication initiation
50032508biological_processDNA duplex unwinding
50032991cellular_componentprotein-containing complex
50042555cellular_componentMCM complex
50043138molecular_function3'-5' DNA helicase activity
50043229cellular_componentintracellular organelle
50071162cellular_componentCMG complex
60000727biological_processdouble-strand break repair via break-induced replication
60000781cellular_componentchromosome, telomeric region
60003677molecular_functionDNA binding
60003678molecular_functionDNA helicase activity
60003697molecular_functionsingle-stranded DNA binding
60004386molecular_functionhelicase activity
60005515molecular_functionprotein binding
60005524molecular_functionATP binding
60005634cellular_componentnucleus
60005654cellular_componentnucleoplasm
60005694cellular_componentchromosome
60006259biological_processDNA metabolic process
60006260biological_processDNA replication
60006268biological_processDNA unwinding involved in DNA replication
60006270biological_processDNA replication initiation
60016787molecular_functionhydrolase activity
60016887molecular_functionATP hydrolysis activity
60030174biological_processregulation of DNA-templated DNA replication initiation
60032508biological_processDNA duplex unwinding
60042555cellular_componentMCM complex
60042802molecular_functionidentical protein binding
60071162cellular_componentCMG complex
61902969biological_processmitotic DNA replication
61990518molecular_functionsingle-stranded 3'-5' DNA helicase activity
70000727biological_processdouble-strand break repair via break-induced replication
70000781cellular_componentchromosome, telomeric region
70000785cellular_componentchromatin
70003677molecular_functionDNA binding
70003678molecular_functionDNA helicase activity
70003697molecular_functionsingle-stranded DNA binding
70004386molecular_functionhelicase activity
70005515molecular_functionprotein binding
70005524molecular_functionATP binding
70005634cellular_componentnucleus
70005654cellular_componentnucleoplasm
70005694cellular_componentchromosome
70005730cellular_componentnucleolus
70005829cellular_componentcytosol
70006259biological_processDNA metabolic process
70006260biological_processDNA replication
70006268biological_processDNA unwinding involved in DNA replication
70006270biological_processDNA replication initiation
70006271biological_processDNA strand elongation involved in DNA replication
70006974biological_processDNA damage response
70008283biological_processcell population proliferation
70016020cellular_componentmembrane
70016787molecular_functionhydrolase activity
70016887molecular_functionATP hydrolysis activity
70017116molecular_functionsingle-stranded DNA helicase activity
70030174biological_processregulation of DNA-templated DNA replication initiation
70032508biological_processDNA duplex unwinding
70042325biological_processregulation of phosphorylation
70042555cellular_componentMCM complex
70043229cellular_componentintracellular organelle
70071162cellular_componentCMG complex
70071466biological_processcellular response to xenobiotic stimulus
A0003674molecular_functionmolecular_function
A0003677molecular_functionDNA binding
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005658cellular_componentalpha DNA polymerase:primase complex
A0005829cellular_componentcytosol
A0006260biological_processDNA replication
A0006269biological_processDNA replication, synthesis of primer
A0006270biological_processDNA replication initiation
A0006606biological_processprotein import into nucleus
B0000166molecular_functionnucleotide binding
B0000731biological_processDNA synthesis involved in DNA repair
B0000785cellular_componentchromatin
B0003676molecular_functionnucleic acid binding
B0003677molecular_functionDNA binding
B0003682molecular_functionchromatin binding
B0003688molecular_functionDNA replication origin binding
B0003697molecular_functionsingle-stranded DNA binding
B0003887molecular_functionDNA-directed DNA polymerase activity
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005635cellular_componentnuclear envelope
B0005654cellular_componentnucleoplasm
B0005658cellular_componentalpha DNA polymerase:primase complex
B0005730cellular_componentnucleolus
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006260biological_processDNA replication
B0006261biological_processDNA-templated DNA replication
B0006269biological_processDNA replication, synthesis of primer
B0006270biological_processDNA replication initiation
B0006271biological_processDNA strand elongation involved in DNA replication
B0006272biological_processleading strand elongation
B0006273biological_processlagging strand elongation
B0006281biological_processDNA repair
B0006289biological_processnucleotide-excision repair
B0006303biological_processdouble-strand break repair via nonhomologous end joining
B0008270molecular_functionzinc ion binding
B0016363cellular_componentnuclear matrix
B0019901molecular_functionprotein kinase binding
B0031981cellular_componentnuclear lumen
B0032479biological_processregulation of type I interferon production
B0046872molecular_functionmetal ion binding
B1902975biological_processmitotic DNA replication initiation
B1904161biological_processDNA synthesis involved in UV-damage excision repair
C0006270biological_processDNA replication initiation
D0000811cellular_componentGINS complex
D0001833biological_processinner cell mass cell proliferation
D0005515molecular_functionprotein binding
D0005634cellular_componentnucleus
D0005654cellular_componentnucleoplasm
D0005694cellular_componentchromosome
D0005737cellular_componentcytoplasm
D0006260biological_processDNA replication
D0006268biological_processDNA unwinding involved in DNA replication
D0071162cellular_componentCMG complex
D1902983biological_processDNA strand elongation involved in mitotic DNA replication
E0000228cellular_componentnuclear chromosome
E0000727biological_processdouble-strand break repair via break-induced replication
E0000811cellular_componentGINS complex
E0005515molecular_functionprotein binding
E0005634cellular_componentnucleus
E0005654cellular_componentnucleoplasm
E0005694cellular_componentchromosome
E0006260biological_processDNA replication
E0006261biological_processDNA-templated DNA replication
E0006268biological_processDNA unwinding involved in DNA replication
E0032993cellular_componentprotein-DNA complex
E0071162cellular_componentCMG complex
F0000811cellular_componentGINS complex
F0005515molecular_functionprotein binding
F0005634cellular_componentnucleus
F0005654cellular_componentnucleoplasm
F0005694cellular_componentchromosome
F0006260biological_processDNA replication
F0006268biological_processDNA unwinding involved in DNA replication
F0071162cellular_componentCMG complex
F1902975biological_processmitotic DNA replication initiation
G0000727biological_processdouble-strand break repair via break-induced replication
G0000811cellular_componentGINS complex
G0001833biological_processinner cell mass cell proliferation
G0005515molecular_functionprotein binding
G0005634cellular_componentnucleus
G0005654cellular_componentnucleoplasm
G0005694cellular_componentchromosome
G0005737cellular_componentcytoplasm
G0006260biological_processDNA replication
G0006261biological_processDNA-templated DNA replication
G0006268biological_processDNA unwinding involved in DNA replication
G0071162cellular_componentCMG complex
H0000278biological_processmitotic cell cycle
H0003677molecular_functionDNA binding
H0003682molecular_functionchromatin binding
H0005515molecular_functionprotein binding
H0005634cellular_componentnucleus
H0005654cellular_componentnucleoplasm
H0005737cellular_componentcytoplasm
H0006261biological_processDNA-templated DNA replication
H0006281biological_processDNA repair
H0043229cellular_componentintracellular organelle
H0043596cellular_componentnuclear replication fork
I0000278biological_processmitotic cell cycle
I0003677molecular_functionDNA binding
I0003682molecular_functionchromatin binding
I0005515molecular_functionprotein binding
I0005634cellular_componentnucleus
I0005654cellular_componentnucleoplasm
I0005737cellular_componentcytoplasm
I0006261biological_processDNA-templated DNA replication
I0006281biological_processDNA repair
I0043229cellular_componentintracellular organelle
I0043596cellular_componentnuclear replication fork
J0000278biological_processmitotic cell cycle
J0003677molecular_functionDNA binding
J0003682molecular_functionchromatin binding
J0005515molecular_functionprotein binding
J0005634cellular_componentnucleus
J0005654cellular_componentnucleoplasm
J0005737cellular_componentcytoplasm
J0006261biological_processDNA-templated DNA replication
J0006281biological_processDNA repair
J0043229cellular_componentintracellular organelle
J0043596cellular_componentnuclear replication fork
K0000076biological_processDNA replication checkpoint signaling
K0000785cellular_componentchromatin
K0002009biological_processmorphogenesis of an epithelium
K0003677molecular_functionDNA binding
K0005515molecular_functionprotein binding
K0005634cellular_componentnucleus
K0005654cellular_componentnucleoplasm
K0005694cellular_componentchromosome
K0006281biological_processDNA repair
K0006974biological_processDNA damage response
K0007623biological_processcircadian rhythm
K0009582biological_processdetection of abiotic stimulus
K0030324biological_processlung development
K0031298cellular_componentreplication fork protection complex
K0035861cellular_componentsite of double-strand break
K0042127biological_processregulation of cell population proliferation
K0042752biological_processregulation of circadian rhythm
K0042802molecular_functionidentical protein binding
K0043111biological_processreplication fork arrest
K0044770biological_processcell cycle phase transition
K0045892biological_processnegative regulation of DNA-templated transcription
K0048511biological_processrhythmic process
K0048754biological_processbranching morphogenesis of an epithelial tube
K0051301biological_processcell division
K0072711biological_processcellular response to hydroxyurea
K0072719biological_processcellular response to cisplatin
K1904976biological_processcellular response to bleomycin
K1905168biological_processpositive regulation of double-strand break repair via homologous recombination
K2000781biological_processpositive regulation of double-strand break repair
L0000076biological_processDNA replication checkpoint signaling
L0000077biological_processDNA damage checkpoint signaling
L0000785cellular_componentchromatin
L0003677molecular_functionDNA binding
L0005515molecular_functionprotein binding
L0005634cellular_componentnucleus
L0005654cellular_componentnucleoplasm
L0005737cellular_componentcytoplasm
L0006974biological_processDNA damage response
L0008284biological_processpositive regulation of cell population proliferation
L0009411biological_processresponse to UV
L0031297biological_processreplication fork processing
L0031298cellular_componentreplication fork protection complex
L0031573biological_processmitotic intra-S DNA damage checkpoint signaling
L0033262biological_processregulation of nuclear cell cycle DNA replication
L0043111biological_processreplication fork arrest
L0044770biological_processcell cycle phase transition
L0051301biological_processcell division
O0000287molecular_functionmagnesium ion binding
O0000428cellular_componentDNA-directed RNA polymerase complex
O0003896molecular_functionDNA primase activity
O0005515molecular_functionprotein binding
O0005654cellular_componentnucleoplasm
O0005658cellular_componentalpha DNA polymerase:primase complex
O0006260biological_processDNA replication
O0006269biological_processDNA replication, synthesis of primer
O0006270biological_processDNA replication initiation
O0008270molecular_functionzinc ion binding
O0016020cellular_componentmembrane
O0016779molecular_functionnucleotidyltransferase activity
O0032553molecular_functionribonucleotide binding
O0046872molecular_functionmetal ion binding
O1990077cellular_componentprimosome complex
P0003677molecular_functionDNA binding
P0005515molecular_functionprotein binding
P0005654cellular_componentnucleoplasm
P0005658cellular_componentalpha DNA polymerase:primase complex
P0006260biological_processDNA replication
P0006261biological_processDNA-templated DNA replication
P0006269biological_processDNA replication, synthesis of primer
P0006270biological_processDNA replication initiation
P0046872molecular_functionmetal ion binding
P0051539molecular_function4 iron, 4 sulfur cluster binding
P0071667molecular_functionDNA/RNA hybrid binding
P1903934biological_processpositive regulation of DNA primase activity
P1990077cellular_componentprimosome complex
Q0000076biological_processDNA replication checkpoint signaling
Q0000077biological_processDNA damage checkpoint signaling
Q0000217molecular_functionDNA secondary structure binding
Q0003677molecular_functionDNA binding
Q0005515molecular_functionprotein binding
Q0005634cellular_componentnucleus
Q0005654cellular_componentnucleoplasm
Q0005794cellular_componentGolgi apparatus
Q0006281biological_processDNA repair
Q0007095biological_processmitotic G2 DNA damage checkpoint signaling
Q0010997molecular_functionanaphase-promoting complex binding
Q0018105biological_processpeptidyl-serine phosphorylation
Q0032147biological_processactivation of protein kinase activity
Q0033314biological_processmitotic DNA replication checkpoint signaling
Functional Information from PROSITE/UniProt
site_idPS00116
Number of Residues9
DetailsDNA_POLYMERASE_B DNA polymerase family B signature. YGDTDSIMI
ChainResidueDetails
BTYR1000-ILE1008

site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. LAAGsiNgLIIVWNV
ChainResidueDetails
HLEU245-VAL259

site_idPS00847
Number of Residues9
DetailsMCM_1 MCM family signature. GVCCIDEFD
ChainResidueDetails
7GLY440-ASP448
3GLY404-ASP412
2GLY582-ASP590
4GLY569-ASP577
6GLY455-ASP463
5GLY440-ASP448

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Phosphotyrosine => ECO:0007744|PubMed:18669648
ChainResidueDetails
CTYR130
7GLY384
7ALA386
7LYS387
7SER388
7ASN489
7ARG514
7ARG604
6GLU622

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648
ChainResidueDetails
CSER134
CSER134
BCYS1310
BCYS1315
BCYS1348
BCYS1353
BCYS1371
BCYS1374

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER141
5SER605
ISER374
OCYS131

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER147
7SER678
5LYS696

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER152
6SER762
ISER387

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER154
JLYS671
ILYS671
QSER744
QSER762
QSER950
QSER954
QSER958

site_idSWS_FT_FI7
Number of Residues3
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
7LYS15
4SER34
7LYS28

site_idSWS_FT_FI8
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P97311
ChainResidueDetails
6SER689
JTHR826
ITHR826

site_idSWS_FT_FI9
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:17525332
ChainResidueDetails
6THR791
4THR110
ISER868

site_idSWS_FT_FI10
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
4SER105
ISER919
ISER932
ISER1041
HSER919
HSER932
HSER1041
JSER917
JSER919
JSER932
JSER1041
ISER917

site_idSWS_FT_FI11
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18691976, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
4SER120
JLYS962
ILYS962

site_idSWS_FT_FI12
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
4SER131
JSER984
ISER984

site_idSWS_FT_FI13
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:20068231
ChainResidueDetails
4SER142
4SER145
ISER1090

site_idSWS_FT_FI14
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
4LYS220
4LYS450
ILYS397

site_idSWS_FT_FI15
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P49717
ChainResidueDetails
4LYS858
HLYS1127
JLYS1127
ILYS1127

site_idSWS_FT_FI16
Number of Residues3
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
4LYS439
3SER734
4LYS798

site_idSWS_FT_FI17
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
ChainResidueDetails
QSER1289

site_idSWS_FT_FI18
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
2LYS216

site_idSWS_FT_FI19
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:21406692
ChainResidueDetails
2SER381

site_idSWS_FT_FI20
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
2LYS178

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PDB entries from 2024-07-24

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