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8AQ3

In surfo structure of the membrane integral lipoprotein N-acyltransferase Lnt from E. coli in complex with PE

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005886cellular_componentplasma membrane
A0006807biological_processobsolete nitrogen compound metabolic process
A0016020cellular_componentmembrane
A0016410molecular_functionN-acyltransferase activity
A0016746molecular_functionacyltransferase activity
A0030288cellular_componentouter membrane-bounded periplasmic space
A0042158biological_processlipoprotein biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues23
Detailsbinding site for residue 6OU A 601
ChainResidue
ATRP74
ASER268
ALYS335
AVAL339
APRO340
APHE341
AGLY342
APRO361
AMET362
AALA387
ATYR388
AVAL75
ASER411
AASN412
AASP413
ATRP415
ASER78
AILE79
ALEU143
APHE146
ALYS236
ATRP237
AGLU267

site_idAC2
Number of Residues18
Detailsbinding site for residue 6OU A 602
ChainResidue
AMET1
AALA2
AARG9
ACYS23
ATHR25
ASER29
APRO30
ATYR31
AASP32
ASER70
AASN73
ALYS418
ASER419
ATRP423
AARG430
AILE458
AHOH702
AHOH738

site_idAC3
Number of Residues1
Detailsbinding site for residue PG5 A 603
ChainResidue
AARG209

site_idAC4
Number of Residues3
Detailsbinding site for residue PG5 A 604
ChainResidue
AARG485
AGOL615
AGOL616

site_idAC5
Number of Residues2
Detailsbinding site for residue PG5 A 605
ChainResidue
AGLY258
ASER261

site_idAC6
Number of Residues2
Detailsbinding site for residue PG5 A 606
ChainResidue
ALEU347
AGOL611

site_idAC7
Number of Residues5
Detailsbinding site for residue PG6 A 607
ChainResidue
AGLU8
AARG13
ALEU47
AASN50
AVAL188

site_idAC8
Number of Residues2
Detailsbinding site for residue TRS A 608
ChainResidue
ATYR250
APHE280

site_idAC9
Number of Residues1
Detailsbinding site for residue ACT A 609
ChainResidue
AARG52

site_idAD1
Number of Residues1
Detailsbinding site for residue GOL A 610
ChainResidue
AGLY87

site_idAD2
Number of Residues5
Detailsbinding site for residue GOL A 611
ChainResidue
ATHR144
APRO346
APG5606
ALMT613
AHOH740

site_idAD3
Number of Residues2
Detailsbinding site for residue LMT A 612
ChainResidue
AARG397
ATRP489

site_idAD4
Number of Residues4
Detailsbinding site for residue LMT A 613
ChainResidue
ATRP141
ALEU143
AGOL611
AHOH740

site_idAD5
Number of Residues1
Detailsbinding site for residue GOL A 614
ChainResidue
AHOH746

site_idAD6
Number of Residues2
Detailsbinding site for residue GOL A 615
ChainResidue
AARG485
APG5604

site_idAD7
Number of Residues2
Detailsbinding site for residue GOL A 616
ChainResidue
AGLN212
APG5604

site_idAD8
Number of Residues1
Detailsbinding site for residue LMT A 618
ChainResidue
APHE65

site_idAD9
Number of Residues1
Detailsbinding site for residue LMT A 619
ChainResidue
AVAL33

site_idAE1
Number of Residues8
Detailsbinding site for residue 6OU A 620
ChainResidue
AVAL134
APHE137
AGLU394
AASN488
ATRP489
ATRP492
AALA496
AGLY499

site_idAE2
Number of Residues2
Detailsbinding site for residue CL A 621
ChainResidue
AARG289
AGLY322

site_idAE3
Number of Residues2
Detailsbinding site for residue CL A 622
ChainResidue
ATRP121
AARG193

site_idAE4
Number of Residues2
Detailsbinding site for residue CL A 623
ChainResidue
AARG9
AARG11

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues18
DetailsTOPO_DOM: Cytoplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
ChainResidueDetails
AMET1-ARG9
APHE49-ARG52
APRO117-THR120
AARG190-ASN191
AGLN509-LYS512

site_idSWS_FT_FI2
Number of Residues153
DetailsTRANSMEM: Helical => ECO:0000269|PubMed:28675161
ChainResidueDetails
AGLN10-ALA27
ATRP34-THR48
APRO53-PHE68
AGLY87-TRP116
ATRP121-TRP141
AVAL169-LYS189
ATRP192-TYR210
AASN488-ARG508

site_idSWS_FT_FI3
Number of Residues324
DetailsTOPO_DOM: Periplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
ChainResidueDetails
APHE28-VAL33
AGLY69-PRO86
AVAL142-GLY168
AILE211-GLY487

site_idSWS_FT_FI4
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_01148, ECO:0000305|PubMed:28675161
ChainResidueDetails
AGLU267

site_idSWS_FT_FI5
Number of Residues1
DetailsACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01148, ECO:0000305|PubMed:28675161
ChainResidueDetails
ALYS335

site_idSWS_FT_FI6
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000255|HAMAP-Rule:MF_01148, ECO:0000305|PubMed:28675161
ChainResidueDetails
AALA387

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PDB entries from 2024-06-12

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