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8AJO

Negative-stain electron microscopy structure of DDB1-DCAF12-CCT5

Functional Information from GO Data
ChainGOidnamespacecontents
A0000781cellular_componentchromosome, telomeric region
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003684molecular_functiondamaged DNA binding
A0005515molecular_functionprotein binding
A0005615cellular_componentextracellular space
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005730cellular_componentnucleolus
A0005737cellular_componentcytoplasm
A0006281biological_processDNA repair
A0006289biological_processnucleotide-excision repair
A0006511biological_processubiquitin-dependent protein catabolic process
A0006915biological_processapoptotic process
A0006974biological_processDNA damage response
A0007056biological_processspindle assembly involved in female meiosis
A0010498biological_processproteasomal protein catabolic process
A0016055biological_processWnt signaling pathway
A0016567biological_processprotein ubiquitination
A0019076biological_processviral release from host cell
A0030674molecular_functionprotein-macromolecule adaptor activity
A0031464cellular_componentCul4A-RING E3 ubiquitin ligase complex
A0031465cellular_componentCul4B-RING E3 ubiquitin ligase complex
A0032991cellular_componentprotein-containing complex
A0034644biological_processcellular response to UV
A0035234biological_processectopic germ cell programmed cell death
A0035861cellular_componentsite of double-strand break
A0042752biological_processregulation of circadian rhythm
A0043066biological_processnegative regulation of apoptotic process
A0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
A0044725biological_processepigenetic programming in the zygotic pronuclei
A0044877molecular_functionprotein-containing complex binding
A0045070biological_processpositive regulation of viral genome replication
A0045722biological_processpositive regulation of gluconeogenesis
A0045732biological_processpositive regulation of protein catabolic process
A0046726biological_processpositive regulation by virus of viral protein levels in host cell
A0048511biological_processrhythmic process
A0051093biological_processnegative regulation of developmental process
A0051702biological_processbiological process involved in interaction with symbiont
A0070062cellular_componentextracellular exosome
A0070914biological_processUV-damage excision repair
A0071987molecular_functionWD40-repeat domain binding
A0080008cellular_componentCul4-RING E3 ubiquitin ligase complex
A0097602molecular_functioncullin family protein binding
A0160072molecular_functionubiquitin ligase complex scaffold activity
A1901990biological_processregulation of mitotic cell cycle phase transition
A2000242biological_processnegative regulation of reproductive process
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0005813cellular_componentcentrosome
B0005829cellular_componentcytosol
B0005856cellular_componentcytoskeleton
B0010506biological_processregulation of autophagy
B0016567biological_processprotein ubiquitination
B0042110biological_processT cell activation
B0080008cellular_componentCul4-RING E3 ubiquitin ligase complex
B0140627biological_processubiquitin-dependent protein catabolic process via the C-end degron rule pathway
B1990756molecular_functionubiquitin-like ligase-substrate adaptor activity
C0003730molecular_functionmRNA 3'-UTR binding
C0005515molecular_functionprotein binding
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0005813cellular_componentcentrosome
C0005829cellular_componentcytosol
C0005832cellular_componentchaperonin-containing T-complex
C0005856cellular_componentcytoskeleton
C0005874cellular_componentmicrotubule
C0006457biological_processprotein folding
C0007339biological_processbinding of sperm to zona pellucida
C0009615biological_processresponse to virus
C0016887molecular_functionATP hydrolysis activity
C0031681molecular_functionG-protein beta-subunit binding
C0032212biological_processpositive regulation of telomere maintenance via telomerase
C0044183molecular_functionprotein folding chaperone
C0044297cellular_componentcell body
C0048027molecular_functionmRNA 5'-UTR binding
C0048487molecular_functionbeta-tubulin binding
C0050821biological_processprotein stabilization
C0051082molecular_functionunfolded protein binding
C0051086biological_processchaperone mediated protein folding independent of cofactor
C0061077biological_processchaperone-mediated protein folding
C0070062cellular_componentextracellular exosome
C0140662molecular_functionATP-dependent protein folding chaperone
C1904851biological_processpositive regulation of establishment of protein localization to telomere
C1904871biological_processpositive regulation of protein localization to Cajal body
C1904874biological_processpositive regulation of telomerase RNA localization to Cajal body
Functional Information from PROSITE/UniProt
site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. AVSGsrDgSMGLWEV
ChainResidueDetails
BALA198-VAL212

site_idPS00750
Number of Residues13
DetailsTCP1_1 Chaperonins TCP-1 signature 1. RTsLGPnGldKMM
ChainResidueDetails
CARG49-MET61

site_idPS00751
Number of Residues17
DetailsTCP1_2 Chaperonins TCP-1 signature 2. VTNDGATILsmMdVdHQ
ChainResidueDetails
CVAL70-GLN86

site_idPS00995
Number of Residues9
DetailsTCP1_3 Chaperonins TCP-1 signature 3. QDdeIGDGT
ChainResidueDetails
CGLN98-THR106

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: N-acetylalanine => ECO:0000269|Ref.6, ECO:0000269|Ref.7, ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22223895, ECO:0007744|PubMed:22814378, ECO:0007744|PubMed:25944712
ChainResidueDetails
CALA2

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:21406692
ChainResidueDetails
CSER26

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
CSER346
CSER539

site_idSWS_FT_FI4
Number of Residues8
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
CLYS20
CLYS210
CLYS214
CLYS265
CLYS275
CLYS279
CLYS392

227344

PDB entries from 2024-11-13

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