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7ZCM

Dark state structure of Sensory Rhodopsin II in complex with HtrII solved by room temperature serial synchrotron crystallography

Functional Information from GO Data
ChainGOidnamespacecontents
A0005216molecular_functionmonoatomic ion channel activity
A0005515molecular_functionprotein binding
A0005886cellular_componentplasma membrane
A0006811biological_processmonoatomic ion transport
A0007602biological_processphototransduction
A0009881molecular_functionphotoreceptor activity
A0016020cellular_componentmembrane
A0034220biological_processmonoatomic ion transmembrane transport
Functional Information from PROSITE/UniProt
site_idPS00327
Number of Residues12
DetailsBACTERIAL_OPSIN_RET Bacterial rhodopsins retinal binding site. IVYLDLvTKvGF
ChainResidueDetails
AILE197-PHE208

site_idPS00950
Number of Residues13
DetailsBACTERIAL_OPSIN_1 Bacterial rhodopsins signature 1. RYiDWiLTTPLIV
ChainResidueDetails
AARG72-VAL84

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues20
DetailsTRANSMEM: Helical; Name=1
ChainResidueDetails
BGLY23-GLU43
ALEU56-PHE69
AVAL118-ILE121
APRO182-THR189

site_idSWS_FT_FI2
Number of Residues15
DetailsTOPO_DOM: Extracellular
ChainResidueDetails
BVAL44-ALA59

site_idSWS_FT_FI3
Number of Residues21
DetailsTRANSMEM: Helical; Name=2
ChainResidueDetails
BALA60-THR81
AGLY92-ASP94
ASER150-SER153

site_idSWS_FT_FI4
Number of Residues21
DetailsTRANSMEM: Helical; Name=Helix B
ChainResidueDetails
AARG34-ALA55

site_idSWS_FT_FI5
Number of Residues21
DetailsTRANSMEM: Helical; Name=Helix C
ChainResidueDetails
AALA70-ALA91

site_idSWS_FT_FI6
Number of Residues22
DetailsTRANSMEM: Helical; Name=Helix D
ChainResidueDetails
ASER95-MET117

site_idSWS_FT_FI7
Number of Residues27
DetailsTRANSMEM: Helical; Name=Helix E
ChainResidueDetails
AGLU122-ALA149

site_idSWS_FT_FI8
Number of Residues27
DetailsTRANSMEM: Helical; Name=Helix F
ChainResidueDetails
ASER154-GLY181

site_idSWS_FT_FI9
Number of Residues32
DetailsTRANSMEM: Helical; Name=Helix G
ChainResidueDetails
APRO190-GLU222

site_idSWS_FT_FI10
Number of Residues1
DetailsMOD_RES: N6-(retinylidene)lysine
ChainResidueDetails
ALYS205

225946

PDB entries from 2024-10-09

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