7YXA
XFEL crystal structure of the human sphingosine 1 phosphate receptor 5 in complex with ONO-5430608
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004930 | molecular_function | G protein-coupled receptor activity |
A | 0005506 | molecular_function | iron ion binding |
A | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
A | 0009055 | molecular_function | electron transfer activity |
A | 0016020 | cellular_component | membrane |
A | 0020037 | molecular_function | heme binding |
A | 0022900 | biological_process | electron transport chain |
A | 0038036 | molecular_function | sphingosine-1-phosphate receptor activity |
A | 0042597 | cellular_component | periplasmic space |
A | 0046872 | molecular_function | metal ion binding |
B | 0004930 | molecular_function | G protein-coupled receptor activity |
B | 0005506 | molecular_function | iron ion binding |
B | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
B | 0009055 | molecular_function | electron transfer activity |
B | 0016020 | cellular_component | membrane |
B | 0020037 | molecular_function | heme binding |
B | 0022900 | biological_process | electron transport chain |
B | 0038036 | molecular_function | sphingosine-1-phosphate receptor activity |
B | 0042597 | cellular_component | periplasmic space |
B | 0046872 | molecular_function | metal ion binding |
Functional Information from PROSITE/UniProt
site_id | PS00237 |
Number of Residues | 17 |
Details | G_PROTEIN_RECEP_F1_1 G-protein coupled receptors family 1 signature. ASVlSLLAIALERSLtM |
Chain | Residue | Details |
A | ALA121-MET137 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 180 |
Details | TOPO_DOM: Extracellular => ECO:0000250 |
Chain | Residue | Details |
A | MET1-ALA40 | |
A | ASN92-ARG111 | |
A | TRP173-ALA192 | |
A | ASP274-GLN287 | |
B | MET1-ALA40 | |
B | ASN92-ARG111 | |
B | TRP173-ALA192 | |
B | ASP274-GLN287 |
site_id | SWS_FT_FI2 |
Number of Residues | 40 |
Details | TRANSMEM: Helical; Name=1 => ECO:0000250 |
Chain | Residue | Details |
A | VAL41-LEU61 | |
B | VAL41-LEU61 |
site_id | SWS_FT_FI3 |
Number of Residues | 52 |
Details | TOPO_DOM: Cytoplasmic => ECO:0000250 |
Chain | Residue | Details |
A | GLY62-PRO70 | |
A | ARG133-THR151 | |
B | GLY62-PRO70 | |
B | ARG133-THR151 |
site_id | SWS_FT_FI4 |
Number of Residues | 40 |
Details | TRANSMEM: Helical; Name=2 => ECO:0000250 |
Chain | Residue | Details |
A | MET71-ALA91 | |
B | MET71-ALA91 |
site_id | SWS_FT_FI5 |
Number of Residues | 40 |
Details | TRANSMEM: Helical; Name=3 => ECO:0000250 |
Chain | Residue | Details |
A | GLU112-GLU132 | |
B | GLU112-GLU132 |
site_id | SWS_FT_FI6 |
Number of Residues | 40 |
Details | TRANSMEM: Helical; Name=4 => ECO:0000250 |
Chain | Residue | Details |
A | LEU152-GLY172 | |
B | LEU152-GLY172 |
site_id | SWS_FT_FI7 |
Number of Residues | 40 |
Details | TRANSMEM: Helical; Name=5 => ECO:0000250 |
Chain | Residue | Details |
A | TYR193-ALA213 | |
B | TYR193-ALA213 |
site_id | SWS_FT_FI8 |
Number of Residues | 40 |
Details | TRANSMEM: Helical; Name=6 => ECO:0000250 |
Chain | Residue | Details |
A | LEU253-LEU273 | |
B | LEU253-LEU273 |
site_id | SWS_FT_FI9 |
Number of Residues | 40 |
Details | TRANSMEM: Helical; Name=7 => ECO:0000250 |
Chain | Residue | Details |
A | ALA288-LEU308 | |
B | ALA288-LEU308 |
site_id | SWS_FT_FI10 |
Number of Residues | 2 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255 |
Chain | Residue | Details |
A | ASN20 | |
B | ASN20 |
site_id | SWS_FT_FI11 |
Number of Residues | 4 |
Details | BINDING: axial binding residue |
Chain | Residue | Details |
A | TRP1007 | |
A | ILE1102 | |
B | TRP1007 | |
B | ILE1102 |