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7VEC

Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272

Functional Information from GO Data
ChainGOidnamespacecontents
A0000045biological_processautophagosome assembly
A0000139cellular_componentGolgi membrane
A0000226biological_processmicrotubule cytoskeleton organization
A0000421cellular_componentautophagosome membrane
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005764cellular_componentlysosome
A0005776cellular_componentautophagosome
A0005790cellular_componentsmooth endoplasmic reticulum
A0005794cellular_componentGolgi apparatus
A0005829cellular_componentcytosol
A0005856cellular_componentcytoskeleton
A0005874cellular_componentmicrotubule
A0005875cellular_componentmicrotubule associated complex
A0005886cellular_componentplasma membrane
A0005930cellular_componentaxoneme
A0006605biological_processprotein targeting
A0006914biological_processautophagy
A0006915biological_processapoptotic process
A0006995biological_processcellular response to nitrogen starvation
A0007268biological_processchemical synaptic transmission
A0008017molecular_functionmicrotubule binding
A0008429molecular_functionphosphatidylethanolamine binding
A0008625biological_processextrinsic apoptotic signaling pathway via death domain receptors
A0012505cellular_componentendomembrane system
A0015031biological_processprotein transport
A0015629cellular_componentactin cytoskeleton
A0016020cellular_componentmembrane
A0031410cellular_componentcytoplasmic vesicle
A0031625molecular_functionubiquitin protein ligase binding
A0032436biological_processpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
A0035020biological_processregulation of Rac protein signal transduction
A0045202cellular_componentsynapse
A0048487molecular_functionbeta-tubulin binding
A0050811molecular_functionGABA receptor binding
A0097225cellular_componentsperm midpiece
A0097352biological_processautophagosome maturation
A1902524biological_processpositive regulation of protein K48-linked ubiquitination
B0000045biological_processautophagosome assembly
B0000139cellular_componentGolgi membrane
B0000226biological_processmicrotubule cytoskeleton organization
B0000421cellular_componentautophagosome membrane
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0005764cellular_componentlysosome
B0005776cellular_componentautophagosome
B0005790cellular_componentsmooth endoplasmic reticulum
B0005794cellular_componentGolgi apparatus
B0005829cellular_componentcytosol
B0005856cellular_componentcytoskeleton
B0005874cellular_componentmicrotubule
B0005875cellular_componentmicrotubule associated complex
B0005886cellular_componentplasma membrane
B0005930cellular_componentaxoneme
B0006605biological_processprotein targeting
B0006914biological_processautophagy
B0006915biological_processapoptotic process
B0006995biological_processcellular response to nitrogen starvation
B0007268biological_processchemical synaptic transmission
B0008017molecular_functionmicrotubule binding
B0008429molecular_functionphosphatidylethanolamine binding
B0008625biological_processextrinsic apoptotic signaling pathway via death domain receptors
B0012505cellular_componentendomembrane system
B0015031biological_processprotein transport
B0015629cellular_componentactin cytoskeleton
B0016020cellular_componentmembrane
B0031410cellular_componentcytoplasmic vesicle
B0031625molecular_functionubiquitin protein ligase binding
B0032436biological_processpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
B0035020biological_processregulation of Rac protein signal transduction
B0045202cellular_componentsynapse
B0048487molecular_functionbeta-tubulin binding
B0050811molecular_functionGABA receptor binding
B0097225cellular_componentsperm midpiece
B0097352biological_processautophagosome maturation
B1902524biological_processpositive regulation of protein K48-linked ubiquitination
C0000045biological_processautophagosome assembly
C0000139cellular_componentGolgi membrane
C0000226biological_processmicrotubule cytoskeleton organization
C0000421cellular_componentautophagosome membrane
C0005515molecular_functionprotein binding
C0005737cellular_componentcytoplasm
C0005764cellular_componentlysosome
C0005776cellular_componentautophagosome
C0005790cellular_componentsmooth endoplasmic reticulum
C0005794cellular_componentGolgi apparatus
C0005829cellular_componentcytosol
C0005856cellular_componentcytoskeleton
C0005874cellular_componentmicrotubule
C0005875cellular_componentmicrotubule associated complex
C0005886cellular_componentplasma membrane
C0005930cellular_componentaxoneme
C0006605biological_processprotein targeting
C0006914biological_processautophagy
C0006915biological_processapoptotic process
C0006995biological_processcellular response to nitrogen starvation
C0007268biological_processchemical synaptic transmission
C0008017molecular_functionmicrotubule binding
C0008429molecular_functionphosphatidylethanolamine binding
C0008625biological_processextrinsic apoptotic signaling pathway via death domain receptors
C0012505cellular_componentendomembrane system
C0015031biological_processprotein transport
C0015629cellular_componentactin cytoskeleton
C0016020cellular_componentmembrane
C0031410cellular_componentcytoplasmic vesicle
C0031625molecular_functionubiquitin protein ligase binding
C0032436biological_processpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
C0035020biological_processregulation of Rac protein signal transduction
C0045202cellular_componentsynapse
C0048487molecular_functionbeta-tubulin binding
C0050811molecular_functionGABA receptor binding
C0097225cellular_componentsperm midpiece
C0097352biological_processautophagosome maturation
C1902524biological_processpositive regulation of protein K48-linked ubiquitination
D0000045biological_processautophagosome assembly
D0000139cellular_componentGolgi membrane
D0000226biological_processmicrotubule cytoskeleton organization
D0000421cellular_componentautophagosome membrane
D0005515molecular_functionprotein binding
D0005737cellular_componentcytoplasm
D0005764cellular_componentlysosome
D0005776cellular_componentautophagosome
D0005790cellular_componentsmooth endoplasmic reticulum
D0005794cellular_componentGolgi apparatus
D0005829cellular_componentcytosol
D0005856cellular_componentcytoskeleton
D0005874cellular_componentmicrotubule
D0005875cellular_componentmicrotubule associated complex
D0005886cellular_componentplasma membrane
D0005930cellular_componentaxoneme
D0006605biological_processprotein targeting
D0006914biological_processautophagy
D0006915biological_processapoptotic process
D0006995biological_processcellular response to nitrogen starvation
D0007268biological_processchemical synaptic transmission
D0008017molecular_functionmicrotubule binding
D0008429molecular_functionphosphatidylethanolamine binding
D0008625biological_processextrinsic apoptotic signaling pathway via death domain receptors
D0012505cellular_componentendomembrane system
D0015031biological_processprotein transport
D0015629cellular_componentactin cytoskeleton
D0016020cellular_componentmembrane
D0031410cellular_componentcytoplasmic vesicle
D0031625molecular_functionubiquitin protein ligase binding
D0032436biological_processpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
D0035020biological_processregulation of Rac protein signal transduction
D0045202cellular_componentsynapse
D0048487molecular_functionbeta-tubulin binding
D0050811molecular_functionGABA receptor binding
D0097225cellular_componentsperm midpiece
D0097352biological_processautophagosome maturation
D1902524biological_processpositive regulation of protein K48-linked ubiquitination
E0000045biological_processautophagosome assembly
E0000139cellular_componentGolgi membrane
E0000226biological_processmicrotubule cytoskeleton organization
E0000421cellular_componentautophagosome membrane
E0005515molecular_functionprotein binding
E0005737cellular_componentcytoplasm
E0005764cellular_componentlysosome
E0005776cellular_componentautophagosome
E0005790cellular_componentsmooth endoplasmic reticulum
E0005794cellular_componentGolgi apparatus
E0005829cellular_componentcytosol
E0005856cellular_componentcytoskeleton
E0005874cellular_componentmicrotubule
E0005875cellular_componentmicrotubule associated complex
E0005886cellular_componentplasma membrane
E0005930cellular_componentaxoneme
E0006605biological_processprotein targeting
E0006914biological_processautophagy
E0006915biological_processapoptotic process
E0006995biological_processcellular response to nitrogen starvation
E0007268biological_processchemical synaptic transmission
E0008017molecular_functionmicrotubule binding
E0008429molecular_functionphosphatidylethanolamine binding
E0008625biological_processextrinsic apoptotic signaling pathway via death domain receptors
E0012505cellular_componentendomembrane system
E0015031biological_processprotein transport
E0015629cellular_componentactin cytoskeleton
E0016020cellular_componentmembrane
E0031410cellular_componentcytoplasmic vesicle
E0031625molecular_functionubiquitin protein ligase binding
E0032436biological_processpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
E0035020biological_processregulation of Rac protein signal transduction
E0045202cellular_componentsynapse
E0048487molecular_functionbeta-tubulin binding
E0050811molecular_functionGABA receptor binding
E0097225cellular_componentsperm midpiece
E0097352biological_processautophagosome maturation
E1902524biological_processpositive regulation of protein K48-linked ubiquitination
F0000045biological_processautophagosome assembly
F0000139cellular_componentGolgi membrane
F0000226biological_processmicrotubule cytoskeleton organization
F0000421cellular_componentautophagosome membrane
F0005515molecular_functionprotein binding
F0005737cellular_componentcytoplasm
F0005764cellular_componentlysosome
F0005776cellular_componentautophagosome
F0005790cellular_componentsmooth endoplasmic reticulum
F0005794cellular_componentGolgi apparatus
F0005829cellular_componentcytosol
F0005856cellular_componentcytoskeleton
F0005874cellular_componentmicrotubule
F0005875cellular_componentmicrotubule associated complex
F0005886cellular_componentplasma membrane
F0005930cellular_componentaxoneme
F0006605biological_processprotein targeting
F0006914biological_processautophagy
F0006915biological_processapoptotic process
F0006995biological_processcellular response to nitrogen starvation
F0007268biological_processchemical synaptic transmission
F0008017molecular_functionmicrotubule binding
F0008429molecular_functionphosphatidylethanolamine binding
F0008625biological_processextrinsic apoptotic signaling pathway via death domain receptors
F0012505cellular_componentendomembrane system
F0015031biological_processprotein transport
F0015629cellular_componentactin cytoskeleton
F0016020cellular_componentmembrane
F0031410cellular_componentcytoplasmic vesicle
F0031625molecular_functionubiquitin protein ligase binding
F0032436biological_processpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
F0035020biological_processregulation of Rac protein signal transduction
F0045202cellular_componentsynapse
F0048487molecular_functionbeta-tubulin binding
F0050811molecular_functionGABA receptor binding
F0097225cellular_componentsperm midpiece
F0097352biological_processautophagosome maturation
F1902524biological_processpositive regulation of protein K48-linked ubiquitination
G0000045biological_processautophagosome assembly
G0000139cellular_componentGolgi membrane
G0000226biological_processmicrotubule cytoskeleton organization
G0000421cellular_componentautophagosome membrane
G0005515molecular_functionprotein binding
G0005737cellular_componentcytoplasm
G0005764cellular_componentlysosome
G0005776cellular_componentautophagosome
G0005790cellular_componentsmooth endoplasmic reticulum
G0005794cellular_componentGolgi apparatus
G0005829cellular_componentcytosol
G0005856cellular_componentcytoskeleton
G0005874cellular_componentmicrotubule
G0005875cellular_componentmicrotubule associated complex
G0005886cellular_componentplasma membrane
G0005930cellular_componentaxoneme
G0006605biological_processprotein targeting
G0006914biological_processautophagy
G0006915biological_processapoptotic process
G0006995biological_processcellular response to nitrogen starvation
G0007268biological_processchemical synaptic transmission
G0008017molecular_functionmicrotubule binding
G0008429molecular_functionphosphatidylethanolamine binding
G0008625biological_processextrinsic apoptotic signaling pathway via death domain receptors
G0012505cellular_componentendomembrane system
G0015031biological_processprotein transport
G0015629cellular_componentactin cytoskeleton
G0016020cellular_componentmembrane
G0031410cellular_componentcytoplasmic vesicle
G0031625molecular_functionubiquitin protein ligase binding
G0032436biological_processpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
G0035020biological_processregulation of Rac protein signal transduction
G0045202cellular_componentsynapse
G0048487molecular_functionbeta-tubulin binding
G0050811molecular_functionGABA receptor binding
G0097225cellular_componentsperm midpiece
G0097352biological_processautophagosome maturation
G1902524biological_processpositive regulation of protein K48-linked ubiquitination
H0000045biological_processautophagosome assembly
H0000139cellular_componentGolgi membrane
H0000226biological_processmicrotubule cytoskeleton organization
H0000421cellular_componentautophagosome membrane
H0005515molecular_functionprotein binding
H0005737cellular_componentcytoplasm
H0005764cellular_componentlysosome
H0005776cellular_componentautophagosome
H0005790cellular_componentsmooth endoplasmic reticulum
H0005794cellular_componentGolgi apparatus
H0005829cellular_componentcytosol
H0005856cellular_componentcytoskeleton
H0005874cellular_componentmicrotubule
H0005875cellular_componentmicrotubule associated complex
H0005886cellular_componentplasma membrane
H0005930cellular_componentaxoneme
H0006605biological_processprotein targeting
H0006914biological_processautophagy
H0006915biological_processapoptotic process
H0006995biological_processcellular response to nitrogen starvation
H0007268biological_processchemical synaptic transmission
H0008017molecular_functionmicrotubule binding
H0008429molecular_functionphosphatidylethanolamine binding
H0008625biological_processextrinsic apoptotic signaling pathway via death domain receptors
H0012505cellular_componentendomembrane system
H0015031biological_processprotein transport
H0015629cellular_componentactin cytoskeleton
H0016020cellular_componentmembrane
H0031410cellular_componentcytoplasmic vesicle
H0031625molecular_functionubiquitin protein ligase binding
H0032436biological_processpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
H0035020biological_processregulation of Rac protein signal transduction
H0045202cellular_componentsynapse
H0048487molecular_functionbeta-tubulin binding
H0050811molecular_functionGABA receptor binding
H0097225cellular_componentsperm midpiece
H0097352biological_processautophagosome maturation
H1902524biological_processpositive regulation of protein K48-linked ubiquitination
I0000045biological_processautophagosome assembly
I0000139cellular_componentGolgi membrane
I0000226biological_processmicrotubule cytoskeleton organization
I0000421cellular_componentautophagosome membrane
I0005515molecular_functionprotein binding
I0005737cellular_componentcytoplasm
I0005764cellular_componentlysosome
I0005776cellular_componentautophagosome
I0005790cellular_componentsmooth endoplasmic reticulum
I0005794cellular_componentGolgi apparatus
I0005829cellular_componentcytosol
I0005856cellular_componentcytoskeleton
I0005874cellular_componentmicrotubule
I0005875cellular_componentmicrotubule associated complex
I0005886cellular_componentplasma membrane
I0005930cellular_componentaxoneme
I0006605biological_processprotein targeting
I0006914biological_processautophagy
I0006915biological_processapoptotic process
I0006995biological_processcellular response to nitrogen starvation
I0007268biological_processchemical synaptic transmission
I0008017molecular_functionmicrotubule binding
I0008429molecular_functionphosphatidylethanolamine binding
I0008625biological_processextrinsic apoptotic signaling pathway via death domain receptors
I0012505cellular_componentendomembrane system
I0015031biological_processprotein transport
I0015629cellular_componentactin cytoskeleton
I0016020cellular_componentmembrane
I0031410cellular_componentcytoplasmic vesicle
I0031625molecular_functionubiquitin protein ligase binding
I0032436biological_processpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
I0035020biological_processregulation of Rac protein signal transduction
I0045202cellular_componentsynapse
I0048487molecular_functionbeta-tubulin binding
I0050811molecular_functionGABA receptor binding
I0097225cellular_componentsperm midpiece
I0097352biological_processautophagosome maturation
I1902524biological_processpositive regulation of protein K48-linked ubiquitination
J0000045biological_processautophagosome assembly
J0000139cellular_componentGolgi membrane
J0000226biological_processmicrotubule cytoskeleton organization
J0000421cellular_componentautophagosome membrane
J0005515molecular_functionprotein binding
J0005737cellular_componentcytoplasm
J0005764cellular_componentlysosome
J0005776cellular_componentautophagosome
J0005790cellular_componentsmooth endoplasmic reticulum
J0005794cellular_componentGolgi apparatus
J0005829cellular_componentcytosol
J0005856cellular_componentcytoskeleton
J0005874cellular_componentmicrotubule
J0005875cellular_componentmicrotubule associated complex
J0005886cellular_componentplasma membrane
J0005930cellular_componentaxoneme
J0006605biological_processprotein targeting
J0006914biological_processautophagy
J0006915biological_processapoptotic process
J0006995biological_processcellular response to nitrogen starvation
J0007268biological_processchemical synaptic transmission
J0008017molecular_functionmicrotubule binding
J0008429molecular_functionphosphatidylethanolamine binding
J0008625biological_processextrinsic apoptotic signaling pathway via death domain receptors
J0012505cellular_componentendomembrane system
J0015031biological_processprotein transport
J0015629cellular_componentactin cytoskeleton
J0016020cellular_componentmembrane
J0031410cellular_componentcytoplasmic vesicle
J0031625molecular_functionubiquitin protein ligase binding
J0032436biological_processpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
J0035020biological_processregulation of Rac protein signal transduction
J0045202cellular_componentsynapse
J0048487molecular_functionbeta-tubulin binding
J0050811molecular_functionGABA receptor binding
J0097225cellular_componentsperm midpiece
J0097352biological_processautophagosome maturation
J1902524biological_processpositive regulation of protein K48-linked ubiquitination
K0000045biological_processautophagosome assembly
K0000139cellular_componentGolgi membrane
K0000226biological_processmicrotubule cytoskeleton organization
K0000421cellular_componentautophagosome membrane
K0005515molecular_functionprotein binding
K0005737cellular_componentcytoplasm
K0005764cellular_componentlysosome
K0005776cellular_componentautophagosome
K0005790cellular_componentsmooth endoplasmic reticulum
K0005794cellular_componentGolgi apparatus
K0005829cellular_componentcytosol
K0005856cellular_componentcytoskeleton
K0005874cellular_componentmicrotubule
K0005875cellular_componentmicrotubule associated complex
K0005886cellular_componentplasma membrane
K0005930cellular_componentaxoneme
K0006605biological_processprotein targeting
K0006914biological_processautophagy
K0006915biological_processapoptotic process
K0006995biological_processcellular response to nitrogen starvation
K0007268biological_processchemical synaptic transmission
K0008017molecular_functionmicrotubule binding
K0008429molecular_functionphosphatidylethanolamine binding
K0008625biological_processextrinsic apoptotic signaling pathway via death domain receptors
K0012505cellular_componentendomembrane system
K0015031biological_processprotein transport
K0015629cellular_componentactin cytoskeleton
K0016020cellular_componentmembrane
K0031410cellular_componentcytoplasmic vesicle
K0031625molecular_functionubiquitin protein ligase binding
K0032436biological_processpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
K0035020biological_processregulation of Rac protein signal transduction
K0045202cellular_componentsynapse
K0048487molecular_functionbeta-tubulin binding
K0050811molecular_functionGABA receptor binding
K0097225cellular_componentsperm midpiece
K0097352biological_processautophagosome maturation
K1902524biological_processpositive regulation of protein K48-linked ubiquitination
L0000045biological_processautophagosome assembly
L0000139cellular_componentGolgi membrane
L0000226biological_processmicrotubule cytoskeleton organization
L0000421cellular_componentautophagosome membrane
L0005515molecular_functionprotein binding
L0005737cellular_componentcytoplasm
L0005764cellular_componentlysosome
L0005776cellular_componentautophagosome
L0005790cellular_componentsmooth endoplasmic reticulum
L0005794cellular_componentGolgi apparatus
L0005829cellular_componentcytosol
L0005856cellular_componentcytoskeleton
L0005874cellular_componentmicrotubule
L0005875cellular_componentmicrotubule associated complex
L0005886cellular_componentplasma membrane
L0005930cellular_componentaxoneme
L0006605biological_processprotein targeting
L0006914biological_processautophagy
L0006915biological_processapoptotic process
L0006995biological_processcellular response to nitrogen starvation
L0007268biological_processchemical synaptic transmission
L0008017molecular_functionmicrotubule binding
L0008429molecular_functionphosphatidylethanolamine binding
L0008625biological_processextrinsic apoptotic signaling pathway via death domain receptors
L0012505cellular_componentendomembrane system
L0015031biological_processprotein transport
L0015629cellular_componentactin cytoskeleton
L0016020cellular_componentmembrane
L0031410cellular_componentcytoplasmic vesicle
L0031625molecular_functionubiquitin protein ligase binding
L0032436biological_processpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
L0035020biological_processregulation of Rac protein signal transduction
L0045202cellular_componentsynapse
L0048487molecular_functionbeta-tubulin binding
L0050811molecular_functionGABA receptor binding
L0097225cellular_componentsperm midpiece
L0097352biological_processautophagosome maturation
L1902524biological_processpositive regulation of protein K48-linked ubiquitination
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues24
DetailsSITE: Interaction with LIR (LC3 nteracting Region) motif of ATG3 => ECO:0000269|PubMed:37252361, ECO:0007744|PDB:8AFI
ChainResidueDetails
GGLU17
GARG28
HGLU17
HARG28
IGLU17
IARG28
JGLU17
JARG28
KGLU17
KARG28
LGLU17
LARG28
AGLU17
AARG28
BGLU17
BARG28
CGLU17
CARG28
DGLU17
DARG28
EGLU17
EARG28
FGLU17
FARG28

site_idSWS_FT_FI2
Number of Residues12
DetailsSITE: Cleavage; by ATG4B => ECO:0000269|PubMed:15169837
ChainResidueDetails
AGLY116
JGLY116
KGLY116
LGLY116
BGLY116
CGLY116
DGLY116
EGLY116
FGLY116
GGLY116
HGLY116
IGLY116

site_idSWS_FT_FI3
Number of Residues12
DetailsLIPID: Phosphatidylserine amidated glycine; alternate => ECO:0000269|PubMed:33909989
ChainResidueDetails
AGLY116
BGLY116
CGLY116
DGLY116
EGLY116
FGLY116
GGLY116
HGLY116
IGLY116
JGLY116
KGLY116
LGLY116

219869

PDB entries from 2024-05-15

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