Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

7SUK

Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
5	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5	0003674	molecular_function	molecular_function
5	0005515	molecular_function	protein binding
5	0005634	cellular_component	nucleus
5	0005730	cellular_component	nucleolus
5	0006364	biological_process	rRNA processing
5	0015031	biological_process	protein transport
5	0016192	biological_process	vesicle-mediated transport
5	0030686	cellular_component	90S preribosome
5	0032040	cellular_component	small-subunit processome
6	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
6	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
6	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
6	0003674	molecular_function	molecular_function
6	0005515	molecular_function	protein binding
6	0005634	cellular_component	nucleus
6	0005730	cellular_component	nucleolus
6	0005732	cellular_component	sno(s)RNA-containing ribonucleoprotein complex
6	0006364	biological_process	rRNA processing
6	0008150	biological_process	biological_process
6	0030490	biological_process	maturation of SSU-rRNA
6	0030532	cellular_component	small nuclear ribonucleoprotein complex
6	0032040	cellular_component	small-subunit processome
6	0042254	biological_process	ribosome biogenesis
6	1990904	cellular_component	ribonucleoprotein complex
L3	0003676	molecular_function	nucleic acid binding
L3	0003723	molecular_function	RNA binding
L3	0003735	molecular_function	structural constituent of ribosome
L3	0005840	cellular_component	ribosome
L3	0006412	biological_process	translation
L4	0003723	molecular_function	RNA binding
L4	0003735	molecular_function	structural constituent of ribosome
L4	0005840	cellular_component	ribosome
L4	0006412	biological_process	translation
L5	0000028	biological_process	ribosomal small subunit assembly
L5	0000054	biological_process	ribosomal subunit export from nucleus
L5	0002181	biological_process	cytoplasmic translation
L5	0003723	molecular_function	RNA binding
L5	0003729	molecular_function	mRNA binding
L5	0003735	molecular_function	structural constituent of ribosome
L5	0005515	molecular_function	protein binding
L5	0005737	cellular_component	cytoplasm
L5	0005829	cellular_component	cytosol
L5	0005840	cellular_component	ribosome
L5	0006412	biological_process	translation
L5	0006450	biological_process	regulation of translational fidelity
L5	0015935	cellular_component	small ribosomal subunit
L5	0019843	molecular_function	rRNA binding
L5	0022627	cellular_component	cytosolic small ribosomal subunit
L5	0030490	biological_process	maturation of SSU-rRNA
L5	0030686	cellular_component	90S preribosome
L5	1990904	cellular_component	ribonucleoprotein complex
L6	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
L6	0003735	molecular_function	structural constituent of ribosome
L6	0005634	cellular_component	nucleus
L6	0005654	cellular_component	nucleoplasm
L6	0005730	cellular_component	nucleolus
L6	0005737	cellular_component	cytoplasm
L6	0005829	cellular_component	cytosol
L6	0005840	cellular_component	ribosome
L6	0006364	biological_process	rRNA processing
L6	0006412	biological_process	translation
L6	0022627	cellular_component	cytosolic small ribosomal subunit
L6	0030686	cellular_component	90S preribosome
L6	0032040	cellular_component	small-subunit processome
L6	0042254	biological_process	ribosome biogenesis
L6	1990904	cellular_component	ribonucleoprotein complex
L7	0002181	biological_process	cytoplasmic translation
L7	0003735	molecular_function	structural constituent of ribosome
L7	0005634	cellular_component	nucleus
L7	0005654	cellular_component	nucleoplasm
L7	0005730	cellular_component	nucleolus
L7	0005737	cellular_component	cytoplasm
L7	0005829	cellular_component	cytosol
L7	0005840	cellular_component	ribosome
L7	0006364	biological_process	rRNA processing
L7	0006412	biological_process	translation
L7	0022627	cellular_component	cytosolic small ribosomal subunit
L7	0030686	cellular_component	90S preribosome
L7	0032040	cellular_component	small-subunit processome
L7	0042254	biological_process	ribosome biogenesis
L7	0042274	biological_process	ribosomal small subunit biogenesis
L7	1990904	cellular_component	ribonucleoprotein complex
L8	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
L8	0003735	molecular_function	structural constituent of ribosome
L8	0005737	cellular_component	cytoplasm
L8	0005829	cellular_component	cytosol
L8	0005840	cellular_component	ribosome
L8	0006412	biological_process	translation
L8	0022627	cellular_component	cytosolic small ribosomal subunit
L8	0030686	cellular_component	90S preribosome
L8	1990904	cellular_component	ribonucleoprotein complex
L9	0003723	molecular_function	RNA binding
L9	0003735	molecular_function	structural constituent of ribosome
L9	0006412	biological_process	translation
L9	0015935	cellular_component	small ribosomal subunit
L9	0019843	molecular_function	rRNA binding
LC	0003735	molecular_function	structural constituent of ribosome
LC	0005840	cellular_component	ribosome
LC	0006412	biological_process	translation
LD	0000028	biological_process	ribosomal small subunit assembly
LD	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LD	0003735	molecular_function	structural constituent of ribosome
LD	0005737	cellular_component	cytoplasm
LD	0005829	cellular_component	cytosol
LD	0005840	cellular_component	ribosome
LD	0006412	biological_process	translation
LD	0019843	molecular_function	rRNA binding
LD	0022627	cellular_component	cytosolic small ribosomal subunit
LD	0030686	cellular_component	90S preribosome
LD	1990904	cellular_component	ribonucleoprotein complex
LE	0002181	biological_process	cytoplasmic translation
LE	0003735	molecular_function	structural constituent of ribosome
LE	0005737	cellular_component	cytoplasm
LE	0005829	cellular_component	cytosol
LE	0005840	cellular_component	ribosome
LE	0006412	biological_process	translation
LE	0022627	cellular_component	cytosolic small ribosomal subunit
LE	1990904	cellular_component	ribonucleoprotein complex
LF	0003735	molecular_function	structural constituent of ribosome
LF	0005840	cellular_component	ribosome
LF	0006412	biological_process	translation
LG	0000028	biological_process	ribosomal small subunit assembly
LG	0000054	biological_process	ribosomal subunit export from nucleus
LG	0003735	molecular_function	structural constituent of ribosome
LG	0005737	cellular_component	cytoplasm
LG	0005829	cellular_component	cytosol
LG	0005840	cellular_component	ribosome
LG	0006412	biological_process	translation
LG	0022627	cellular_component	cytosolic small ribosomal subunit
LG	0030490	biological_process	maturation of SSU-rRNA
LG	1900153	biological_process	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
LG	1990904	cellular_component	ribonucleoprotein complex
LH	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LH	0003723	molecular_function	RNA binding
LH	0003729	molecular_function	mRNA binding
LH	0005515	molecular_function	protein binding
LH	0005634	cellular_component	nucleus
LH	0005654	cellular_component	nucleoplasm
LH	0005730	cellular_component	nucleolus
LH	0005777	cellular_component	peroxisome
LH	0006364	biological_process	rRNA processing
LH	0030490	biological_process	maturation of SSU-rRNA
LH	0030686	cellular_component	90S preribosome
LH	0032040	cellular_component	small-subunit processome
LH	0033553	cellular_component	rDNA heterochromatin
LH	0034455	cellular_component	t-UTP complex
LH	0034511	molecular_function	U3 snoRNA binding
LH	0042254	biological_process	ribosome biogenesis
LH	0045943	biological_process	positive regulation of transcription by RNA polymerase I
LH	1990904	cellular_component	ribonucleoprotein complex
LH	2000234	biological_process	positive regulation of rRNA processing
LI	0000049	molecular_function	tRNA binding
LI	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LI	0005515	molecular_function	protein binding
LI	0005634	cellular_component	nucleus
LI	0005730	cellular_component	nucleolus
LI	0006364	biological_process	rRNA processing
LI	0006409	biological_process	tRNA export from nucleus
LI	0030490	biological_process	maturation of SSU-rRNA
LI	0030686	cellular_component	90S preribosome
LI	0032040	cellular_component	small-subunit processome
LI	0033553	cellular_component	rDNA heterochromatin
LI	0034455	cellular_component	t-UTP complex
LI	0034511	molecular_function	U3 snoRNA binding
LI	0042254	biological_process	ribosome biogenesis
LI	0045943	biological_process	positive regulation of transcription by RNA polymerase I
LI	1990904	cellular_component	ribonucleoprotein complex
LJ	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LJ	0005515	molecular_function	protein binding
LJ	0005634	cellular_component	nucleus
LJ	0005654	cellular_component	nucleoplasm
LJ	0005730	cellular_component	nucleolus
LJ	0006364	biological_process	rRNA processing
LJ	0030490	biological_process	maturation of SSU-rRNA
LJ	0030686	cellular_component	90S preribosome
LJ	0032040	cellular_component	small-subunit processome
LJ	0033553	cellular_component	rDNA heterochromatin
LJ	0034455	cellular_component	t-UTP complex
LJ	0034511	molecular_function	U3 snoRNA binding
LJ	0042254	biological_process	ribosome biogenesis
LJ	0045943	biological_process	positive regulation of transcription by RNA polymerase I
LJ	1990904	cellular_component	ribonucleoprotein complex
LN	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LN	0003674	molecular_function	molecular_function
LN	0005515	molecular_function	protein binding
LN	0005634	cellular_component	nucleus
LN	0005654	cellular_component	nucleoplasm
LN	0005730	cellular_component	nucleolus
LN	0006364	biological_process	rRNA processing
LN	0030490	biological_process	maturation of SSU-rRNA
LN	0030686	cellular_component	90S preribosome
LN	0032040	cellular_component	small-subunit processome
LN	0034455	cellular_component	t-UTP complex
LN	0042254	biological_process	ribosome biogenesis
LN	0045943	biological_process	positive regulation of transcription by RNA polymerase I
LN	1990904	cellular_component	ribonucleoprotein complex
LO	0000028	biological_process	ribosomal small subunit assembly
LO	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LO	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LO	0000472	biological_process	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LO	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LO	0000920	biological_process	septum digestion after cytokinesis
LO	0003729	molecular_function	mRNA binding
LO	0005515	molecular_function	protein binding
LO	0005634	cellular_component	nucleus
LO	0005654	cellular_component	nucleoplasm
LO	0005730	cellular_component	nucleolus
LO	0005737	cellular_component	cytoplasm
LO	0006364	biological_process	rRNA processing
LO	0030010	biological_process	establishment of cell polarity
LO	0030490	biological_process	maturation of SSU-rRNA
LO	0030686	cellular_component	90S preribosome
LO	0032040	cellular_component	small-subunit processome
LO	0034388	cellular_component	Pwp2p-containing subcomplex of 90S preribosome
LO	0042254	biological_process	ribosome biogenesis
LO	1990904	cellular_component	ribonucleoprotein complex
LP	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LP	0005634	cellular_component	nucleus
LP	0006396	biological_process	RNA processing
LP	0030515	molecular_function	snoRNA binding
LQ	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LQ	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LQ	0000472	biological_process	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LQ	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LQ	0005515	molecular_function	protein binding
LQ	0005634	cellular_component	nucleus
LQ	0005654	cellular_component	nucleoplasm
LQ	0005730	cellular_component	nucleolus
LQ	0006364	biological_process	rRNA processing
LQ	0030490	biological_process	maturation of SSU-rRNA
LQ	0030515	molecular_function	snoRNA binding
LQ	0030686	cellular_component	90S preribosome
LQ	0032040	cellular_component	small-subunit processome
LQ	0034388	cellular_component	Pwp2p-containing subcomplex of 90S preribosome
LQ	0034511	molecular_function	U3 snoRNA binding
LQ	0042254	biological_process	ribosome biogenesis
LQ	1990904	cellular_component	ribonucleoprotein complex
LR	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LR	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LR	0000472	biological_process	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LR	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LR	0005515	molecular_function	protein binding
LR	0005634	cellular_component	nucleus
LR	0005654	cellular_component	nucleoplasm
LR	0005730	cellular_component	nucleolus
LR	0006364	biological_process	rRNA processing
LR	0030490	biological_process	maturation of SSU-rRNA
LR	0030686	cellular_component	90S preribosome
LR	0032040	cellular_component	small-subunit processome
LR	0034388	cellular_component	Pwp2p-containing subcomplex of 90S preribosome
LR	0034511	molecular_function	U3 snoRNA binding
LR	0042254	biological_process	ribosome biogenesis
LR	1990904	cellular_component	ribonucleoprotein complex
LS	0000292	biological_process	RNA fragment catabolic process
LS	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LS	0000472	biological_process	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LS	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LS	0003674	molecular_function	molecular_function
LS	0005515	molecular_function	protein binding
LS	0005634	cellular_component	nucleus
LS	0005654	cellular_component	nucleoplasm
LS	0005730	cellular_component	nucleolus
LS	0006364	biological_process	rRNA processing
LS	0030490	biological_process	maturation of SSU-rRNA
LS	0030686	cellular_component	90S preribosome
LS	0032040	cellular_component	small-subunit processome
LS	0034388	cellular_component	Pwp2p-containing subcomplex of 90S preribosome
LS	0042254	biological_process	ribosome biogenesis
LS	1990904	cellular_component	ribonucleoprotein complex
LT	0003674	molecular_function	molecular_function
LT	0005515	molecular_function	protein binding
LT	0005634	cellular_component	nucleus
LT	0005654	cellular_component	nucleoplasm
LT	0005730	cellular_component	nucleolus
LT	0006364	biological_process	rRNA processing
LT	0030490	biological_process	maturation of SSU-rRNA
LT	0030686	cellular_component	90S preribosome
LT	0032040	cellular_component	small-subunit processome
LT	0034388	cellular_component	Pwp2p-containing subcomplex of 90S preribosome
LT	0042254	biological_process	ribosome biogenesis
LT	1990904	cellular_component	ribonucleoprotein complex
LU	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LU	0003729	molecular_function	mRNA binding
LU	0005634	cellular_component	nucleus
LU	0005654	cellular_component	nucleoplasm
LU	0005730	cellular_component	nucleolus
LU	0006364	biological_process	rRNA processing
LU	0030490	biological_process	maturation of SSU-rRNA
LU	0030686	cellular_component	90S preribosome
LU	0032040	cellular_component	small-subunit processome
LU	0042254	biological_process	ribosome biogenesis
LU	1990904	cellular_component	ribonucleoprotein complex
LX	0005524	molecular_function	ATP binding
LX	0008080	molecular_function	N-acetyltransferase activity
LX	0016072	biological_process	rRNA metabolic process
LX	0016747	molecular_function	acyltransferase activity, transferring groups other than amino-acyl groups
LX	1904812	biological_process	rRNA acetylation involved in maturation of SSU-rRNA
LY	0005524	molecular_function	ATP binding
LY	0008080	molecular_function	N-acetyltransferase activity
LY	0016072	biological_process	rRNA metabolic process
LY	0016747	molecular_function	acyltransferase activity, transferring groups other than amino-acyl groups
LY	1904812	biological_process	rRNA acetylation involved in maturation of SSU-rRNA
LZ	0003723	molecular_function	RNA binding
LZ	0005515	molecular_function	protein binding
LZ	0005634	cellular_component	nucleus
LZ	0005654	cellular_component	nucleoplasm
LZ	0005730	cellular_component	nucleolus
LZ	0006364	biological_process	rRNA processing
LZ	0019843	molecular_function	rRNA binding
LZ	0030490	biological_process	maturation of SSU-rRNA
LZ	0030515	molecular_function	snoRNA binding
LZ	0030686	cellular_component	90S preribosome
LZ	0032040	cellular_component	small-subunit processome
LZ	0034457	cellular_component	Mpp10 complex
LZ	0042254	biological_process	ribosome biogenesis
LZ	0042274	biological_process	ribosomal small subunit biogenesis
LZ	1990904	cellular_component	ribonucleoprotein complex
NA	0005634	cellular_component	nucleus
NA	0005732	cellular_component	sno(s)RNA-containing ribonucleoprotein complex
NA	0006364	biological_process	rRNA processing
NA	0034457	cellular_component	Mpp10 complex
ND	0006364	biological_process	rRNA processing
ND	0030515	molecular_function	snoRNA binding
NF	0003735	molecular_function	structural constituent of ribosome
NF	0005840	cellular_component	ribosome
NF	0006412	biological_process	translation
NG	0003735	molecular_function	structural constituent of ribosome
NG	0005840	cellular_component	ribosome
NG	0006412	biological_process	translation
NH	0000028	biological_process	ribosomal small subunit assembly
NH	0003674	molecular_function	molecular_function
NH	0003723	molecular_function	RNA binding
NH	0005515	molecular_function	protein binding
NH	0005634	cellular_component	nucleus
NH	0005654	cellular_component	nucleoplasm
NH	0005730	cellular_component	nucleolus
NH	0006364	biological_process	rRNA processing
NH	0006409	biological_process	tRNA export from nucleus
NH	0030490	biological_process	maturation of SSU-rRNA
NH	0030686	cellular_component	90S preribosome
NH	0032040	cellular_component	small-subunit processome
NH	0032545	cellular_component	CURI complex
NH	0034456	cellular_component	UTP-C complex
NH	0042254	biological_process	ribosome biogenesis
NH	0042790	biological_process	nucleolar large rRNA transcription by RNA polymerase I
NH	0060962	biological_process	regulation of ribosomal protein gene transcription by RNA polymerase II
NH	1990904	cellular_component	ribonucleoprotein complex
NJ	0006364	biological_process	rRNA processing
NJ	0006396	biological_process	RNA processing
NK	0003676	molecular_function	nucleic acid binding
NK	0003723	molecular_function	RNA binding
SA	0030515	molecular_function	snoRNA binding
SA	0031428	cellular_component	box C/D methylation guide snoRNP complex
SA	0032040	cellular_component	small-subunit processome
SB	0030515	molecular_function	snoRNA binding
SB	0031428	cellular_component	box C/D methylation guide snoRNP complex
SB	0032040	cellular_component	small-subunit processome
SC	0003723	molecular_function	RNA binding
SC	0006364	biological_process	rRNA processing
SC	0008168	molecular_function	methyltransferase activity
SD	0003723	molecular_function	RNA binding
SD	0006364	biological_process	rRNA processing
SD	0008168	molecular_function	methyltransferase activity
SE	0000245	biological_process	spliceosomal complex assembly
SE	0000398	biological_process	mRNA splicing, via spliceosome
SE	0000452	biological_process	snoRNA guided rRNA 2'-O-methylation
SE	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SE	0000494	biological_process	box C/D sno(s)RNA 3'-end processing
SE	0003723	molecular_function	RNA binding
SE	0005515	molecular_function	protein binding
SE	0005634	cellular_component	nucleus
SE	0005654	cellular_component	nucleoplasm
SE	0005681	cellular_component	spliceosomal complex
SE	0005687	cellular_component	U4 snRNP
SE	0005730	cellular_component	nucleolus
SE	0006364	biological_process	rRNA processing
SE	0006397	biological_process	mRNA processing
SE	0008380	biological_process	RNA splicing
SE	0030490	biological_process	maturation of SSU-rRNA
SE	0030621	molecular_function	U4 snRNA binding
SE	0031428	cellular_component	box C/D methylation guide snoRNP complex
SE	0032040	cellular_component	small-subunit processome
SE	0034511	molecular_function	U3 snoRNA binding
SE	0042254	biological_process	ribosome biogenesis
SE	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
SE	0071001	cellular_component	U4/U6 snRNP
SE	0071011	cellular_component	precatalytic spliceosome
SE	1990904	cellular_component	ribonucleoprotein complex
SF	0000245	biological_process	spliceosomal complex assembly
SF	0000398	biological_process	mRNA splicing, via spliceosome
SF	0000452	biological_process	snoRNA guided rRNA 2'-O-methylation
SF	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SF	0000494	biological_process	box C/D sno(s)RNA 3'-end processing
SF	0003723	molecular_function	RNA binding
SF	0005515	molecular_function	protein binding
SF	0005634	cellular_component	nucleus
SF	0005654	cellular_component	nucleoplasm
SF	0005681	cellular_component	spliceosomal complex
SF	0005687	cellular_component	U4 snRNP
SF	0005730	cellular_component	nucleolus
SF	0006364	biological_process	rRNA processing
SF	0006397	biological_process	mRNA processing
SF	0008380	biological_process	RNA splicing
SF	0030490	biological_process	maturation of SSU-rRNA
SF	0030621	molecular_function	U4 snRNA binding
SF	0031428	cellular_component	box C/D methylation guide snoRNP complex
SF	0032040	cellular_component	small-subunit processome
SF	0034511	molecular_function	U3 snoRNA binding
SF	0042254	biological_process	ribosome biogenesis
SF	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
SF	0071001	cellular_component	U4/U6 snRNP
SF	0071011	cellular_component	precatalytic spliceosome
SF	1990904	cellular_component	ribonucleoprotein complex
SG	0034511	molecular_function	U3 snoRNA binding
SH	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SH	0000472	biological_process	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SH	0000479	biological_process	endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SH	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SH	0003824	molecular_function	catalytic activity
SH	0003963	molecular_function	RNA-3'-phosphate cyclase activity
SH	0004521	molecular_function	RNA endonuclease activity
SH	0005515	molecular_function	protein binding
SH	0005634	cellular_component	nucleus
SH	0005654	cellular_component	nucleoplasm
SH	0005730	cellular_component	nucleolus
SH	0006364	biological_process	rRNA processing
SH	0006396	biological_process	RNA processing
SH	0008047	molecular_function	enzyme activator activity
SH	0030490	biological_process	maturation of SSU-rRNA
SH	0030686	cellular_component	90S preribosome
SH	0032040	cellular_component	small-subunit processome
SH	0042254	biological_process	ribosome biogenesis
SH	0042274	biological_process	ribosomal small subunit biogenesis
SH	2000232	biological_process	regulation of rRNA processing
SI	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SI	0000472	biological_process	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SI	0000479	biological_process	endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SI	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SI	0003729	molecular_function	mRNA binding
SI	0003924	molecular_function	GTPase activity
SI	0005515	molecular_function	protein binding
SI	0005524	molecular_function	ATP binding
SI	0005525	molecular_function	GTP binding
SI	0005634	cellular_component	nucleus
SI	0005654	cellular_component	nucleoplasm
SI	0005730	cellular_component	nucleolus
SI	0005737	cellular_component	cytoplasm
SI	0005739	cellular_component	mitochondrion
SI	0016887	molecular_function	ATP hydrolysis activity
SI	0030490	biological_process	maturation of SSU-rRNA
SI	0030686	cellular_component	90S preribosome
SI	0032040	cellular_component	small-subunit processome
SI	0034511	molecular_function	U3 snoRNA binding
SI	0042254	biological_process	ribosome biogenesis
SI	0042274	biological_process	ribosomal small subunit biogenesis
SI	2000232	biological_process	regulation of rRNA processing
SJ	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SJ	0000472	biological_process	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SJ	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SJ	0005515	molecular_function	protein binding
SJ	0005634	cellular_component	nucleus
SJ	0005654	cellular_component	nucleoplasm
SJ	0005730	cellular_component	nucleolus
SJ	0005737	cellular_component	cytoplasm
SJ	0005880	cellular_component	nuclear microtubule
SJ	0006364	biological_process	rRNA processing
SJ	0008168	molecular_function	methyltransferase activity
SJ	0019843	molecular_function	rRNA binding
SJ	0030490	biological_process	maturation of SSU-rRNA
SJ	0030686	cellular_component	90S preribosome
SJ	0031167	biological_process	rRNA methylation
SJ	0032040	cellular_component	small-subunit processome
SJ	0032259	biological_process	methylation
SJ	0034399	cellular_component	nuclear periphery
SJ	0042254	biological_process	ribosome biogenesis
SJ	0042274	biological_process	ribosomal small subunit biogenesis
SJ	0042802	molecular_function	identical protein binding
SJ	0070037	molecular_function	rRNA (pseudouridine) methyltransferase activity
SJ	0070475	biological_process	rRNA base methylation
SJ	1990904	cellular_component	ribonucleoprotein complex
SK	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SK	0000472	biological_process	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SK	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SK	0005515	molecular_function	protein binding
SK	0005634	cellular_component	nucleus
SK	0005654	cellular_component	nucleoplasm
SK	0005730	cellular_component	nucleolus
SK	0005737	cellular_component	cytoplasm
SK	0005880	cellular_component	nuclear microtubule
SK	0006364	biological_process	rRNA processing
SK	0008168	molecular_function	methyltransferase activity
SK	0019843	molecular_function	rRNA binding
SK	0030490	biological_process	maturation of SSU-rRNA
SK	0030686	cellular_component	90S preribosome
SK	0031167	biological_process	rRNA methylation
SK	0032040	cellular_component	small-subunit processome
SK	0032259	biological_process	methylation
SK	0034399	cellular_component	nuclear periphery
SK	0042254	biological_process	ribosome biogenesis
SK	0042274	biological_process	ribosomal small subunit biogenesis
SK	0042802	molecular_function	identical protein binding
SK	0070037	molecular_function	rRNA (pseudouridine) methyltransferase activity
SK	0070475	biological_process	rRNA base methylation
SK	1990904	cellular_component	ribonucleoprotein complex
SL	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SL	0000472	biological_process	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SL	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SL	0004521	molecular_function	RNA endonuclease activity
SL	0004540	molecular_function	RNA nuclease activity
SL	0005515	molecular_function	protein binding
SL	0005634	cellular_component	nucleus
SL	0005654	cellular_component	nucleoplasm
SL	0005730	cellular_component	nucleolus
SL	0006364	biological_process	rRNA processing
SL	0008270	molecular_function	zinc ion binding
SL	0030490	biological_process	maturation of SSU-rRNA
SL	0032040	cellular_component	small-subunit processome
SL	0042254	biological_process	ribosome biogenesis
SM	0005515	molecular_function	protein binding
SM	0005634	cellular_component	nucleus
SM	0005654	cellular_component	nucleoplasm
SM	0005730	cellular_component	nucleolus
SM	0006364	biological_process	rRNA processing
SM	0019843	molecular_function	rRNA binding
SM	0030490	biological_process	maturation of SSU-rRNA
SM	0030515	molecular_function	snoRNA binding
SM	0030686	cellular_component	90S preribosome
SM	0032040	cellular_component	small-subunit processome
SM	0034457	cellular_component	Mpp10 complex
SM	0042134	molecular_function	rRNA primary transcript binding
SM	0042254	biological_process	ribosome biogenesis
SM	0042274	biological_process	ribosomal small subunit biogenesis
SM	0043047	molecular_function	single-stranded telomeric DNA binding
SM	1990904	cellular_component	ribonucleoprotein complex
SN	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SN	0003674	molecular_function	molecular_function
SN	0003723	molecular_function	RNA binding
SN	0005515	molecular_function	protein binding
SN	0005634	cellular_component	nucleus
SN	0005730	cellular_component	nucleolus
SN	0006364	biological_process	rRNA processing
SN	0030490	biological_process	maturation of SSU-rRNA
SN	0030686	cellular_component	90S preribosome
SN	0032040	cellular_component	small-subunit processome
SN	0042254	biological_process	ribosome biogenesis
SN	0042274	biological_process	ribosomal small subunit biogenesis
SN	1990904	cellular_component	ribonucleoprotein complex
SO	0003723	molecular_function	RNA binding
SP	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SP	0000472	biological_process	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SP	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SP	0003729	molecular_function	mRNA binding
SP	0005515	molecular_function	protein binding
SP	0005634	cellular_component	nucleus
SP	0005654	cellular_component	nucleoplasm
SP	0005730	cellular_component	nucleolus
SP	0005737	cellular_component	cytoplasm
SP	0006364	biological_process	rRNA processing
SP	0030490	biological_process	maturation of SSU-rRNA
SP	0030686	cellular_component	90S preribosome
SP	0030688	cellular_component	preribosome, small subunit precursor
SP	0032040	cellular_component	small-subunit processome
SP	0042254	biological_process	ribosome biogenesis
SP	1990904	cellular_component	ribonucleoprotein complex
SR	0003735	molecular_function	structural constituent of ribosome
SR	0005840	cellular_component	ribosome
SR	0006412	biological_process	translation
SR	0015935	cellular_component	small ribosomal subunit
SS	0006364	biological_process	rRNA processing
SS	0032040	cellular_component	small-subunit processome
ST	0000028	biological_process	ribosomal small subunit assembly
ST	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ST	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ST	0000472	biological_process	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ST	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ST	0005515	molecular_function	protein binding
ST	0005634	cellular_component	nucleus
ST	0005654	cellular_component	nucleoplasm
ST	0005730	cellular_component	nucleolus
ST	0005739	cellular_component	mitochondrion
ST	0006364	biological_process	rRNA processing
ST	0030490	biological_process	maturation of SSU-rRNA
ST	0030686	cellular_component	90S preribosome
ST	0030688	cellular_component	preribosome, small subunit precursor
ST	0030692	cellular_component	Noc4p-Nop14p complex
ST	0032040	cellular_component	small-subunit processome
ST	0034511	molecular_function	U3 snoRNA binding
ST	0042254	biological_process	ribosome biogenesis
ST	0042274	biological_process	ribosomal small subunit biogenesis
ST	1990904	cellular_component	ribonucleoprotein complex
SU	0000028	biological_process	ribosomal small subunit assembly
SU	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SU	0000472	biological_process	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SU	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SU	0003674	molecular_function	molecular_function
SU	0005515	molecular_function	protein binding
SU	0005634	cellular_component	nucleus
SU	0005654	cellular_component	nucleoplasm
SU	0005730	cellular_component	nucleolus
SU	0005829	cellular_component	cytosol
SU	0006364	biological_process	rRNA processing
SU	0030490	biological_process	maturation of SSU-rRNA
SU	0030686	cellular_component	90S preribosome
SU	0030688	cellular_component	preribosome, small subunit precursor
SU	0030692	cellular_component	Noc4p-Nop14p complex
SU	0032040	cellular_component	small-subunit processome
SU	0042254	biological_process	ribosome biogenesis
SU	0042274	biological_process	ribosomal small subunit biogenesis
SU	0043231	cellular_component	intracellular membrane-bounded organelle
SU	1990904	cellular_component	ribonucleoprotein complex
SY	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SY	0000472	biological_process	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SY	0000480	biological_process	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SY	0003674	molecular_function	molecular_function
SY	0005634	cellular_component	nucleus
SY	0005654	cellular_component	nucleoplasm
SY	0005730	cellular_component	nucleolus
SY	0005732	cellular_component	sno(s)RNA-containing ribonucleoprotein complex
SY	0006364	biological_process	rRNA processing
SY	0006412	biological_process	translation
SY	0030490	biological_process	maturation of SSU-rRNA
SY	0032040	cellular_component	small-subunit processome
SY	0042254	biological_process	ribosome biogenesis
SY	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PROSITE/UniProt

site_id	PS00052
Number of Residues	27
Details	RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsLMmngrnnGKKlkavrIIkhT

Chain	Residue	Details
L5	GLU91-THR117

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GyvILTTSaGIMdheeAR

Chain	Residue	Details
LE	GLY100-ARG117

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR

Chain	Residue	Details
SR	LYS62-ARG69

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgQcRPIS

Chain	Residue	Details
LD	GLY120-SER132

site_id	PS00178
Number of Residues	11
Details	AA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. Pw.NAvMHLGHS

Chain	Residue	Details
LW	PRO242-SER252

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvSQvyAirqAiAKGL

Chain	Residue	Details
LC	GLY71-LEU89

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY

Chain	Residue	Details
NF	VAL98-TYR128

site_id	PS00529
Number of Residues	23
Details	RIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKSvGFGlVYNSvaeakkfE

Chain	Residue	Details
LF	PHE64-GLU86

site_id	PS00566
Number of Residues	15
Details	FIBRILLARIN Fibrillarin signature. GVVYAVEFShRpgRE

Chain	Residue	Details
SC	GLY192-GLU206

site_id	PS00578
Number of Residues	12
Details	RIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM

Chain	Residue	Details
L6	ILE52-MET63

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVYKlglAkSvhhARvLI

Chain	Residue	Details
L9	LEU105-ILE129

site_id	PS00678
Number of Residues	15
Details	WD_REPEATS_1 Trp-Asp (WD) repeats signature. LATAsdDrVTRLWDI

Chain	Residue	Details
LJ	LEU140-ILE154
LO	ILE206-PHE220
LO	VAL360-ILE374
LO	MET402-LEU416
LW	MET289-ILE303
LR	LEU163-LEU177
LR	LEU211-PHE225
LR	LEU590-CYS604
LT	ILE600-LEU614
LQ	LEU136-LEU150
LQ	LEU177-LEU191
LQ	LEU405-ILE419
LQ	LEU488-PHE502

site_id	PS00948
Number of Residues	14
Details	RIBOSOMAL_S7E Ribosomal protein S7e signature. KLtRELEKKFQdRH

Chain	Residue	Details
L7	LYS76-HIS89

site_id	PS00961
Number of Residues	9
Details	RIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL

Chain	Residue	Details
LG	GLU58-LEU66

site_id	PS01082
Number of Residues	18
Details	RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CedknVPYvfVpSRvaLG

Chain	Residue	Details
SE	CYS71-GLY88

site_id	PS01193
Number of Residues	20
Details	RIBOSOMAL_S8E Ribosomal protein S8e signature. RsaTGAkraqf.RkKrKfELG

Chain	Residue	Details
L8	ARG11-GLY30

site_id	PS01287
Number of Residues	11
Details	RTC RNA 3'-terminal phosphate cyclase signature. RGspPlGGGeV

Chain	Residue	Details
SH	ARG156-VAL166

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	MOD_RES: Phosphoserine => ECO:0007744\|PubMed:17330950, ECO:0007744\|PubMed:18407956, ECO:0007744\|PubMed:19779198

Chain	Residue	Details
NB	SER477
LX	ASN739
5	SER44
5	SER366
5	SER379
LY	ASN739
LX	GLY286
LX	ARG475
LX	ILE638
LX	ALA645

site_id	SWS_FT_FI2
Number of Residues	5
Details	MOD_RES: Phosphoserine => ECO:0007744\|PubMed:19779198

Chain	Residue	Details
SI	SER378
LD	LYS141
LD	LYS148
SI	SER380
SI	SER381
SI	UNK393
SI	SER574
SK	ARG129
SK	ARG132
SK	ARG136
LD	LYS133

site_id	SWS_FT_FI3
Number of Residues	1
Details	MOD_RES: Phosphoserine => ECO:0007744\|PubMed:18407956, ECO:0007744\|PubMed:19779198

Chain	Residue	Details
SI	SER379
SK	ASP90
L3	LYS49
L3	LYS80
L3	LYS96
L4	LYS174
L4	LYS179
L4	LYS211
L4	LYS233

site_id	SWS_FT_FI4
Number of Residues	2
Details	MOD_RES: Phosphothreonine => ECO:0007744\|PubMed:19779198

Chain	Residue	Details
SI	THR380
SI	THR381
LC	LYS47
LC	LYS59

site_id	SWS_FT_FI5
Number of Residues	1
Details	MOD_RES: Phosphoserine => ECO:0007744\|PubMed:17330950, ECO:0007744\|PubMed:19779198

Chain	Residue	Details
SI	SER578

site_id	SWS_FT_FI6
Number of Residues	1
Details	MOD_RES: Phosphoserine => ECO:0007744\|PubMed:18407956

Chain	Residue	Details
L8	SER158

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)