7PLI

DEAD-box helicase DbpA bound to single stranded RNA and ADP/BeF3

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000027	biological_process	ribosomal large subunit assembly
A	0000166	molecular_function	nucleotide binding
A	0003676	molecular_function	nucleic acid binding
A	0003723	molecular_function	RNA binding
A	0003724	molecular_function	RNA helicase activity
A	0004386	molecular_function	helicase activity
A	0005524	molecular_function	ATP binding
A	0005737	cellular_component	cytoplasm
A	0005829	cellular_component	cytosol
A	0016787	molecular_function	hydrolase activity
A	0016887	molecular_function	ATP hydrolysis activity
A	0019843	molecular_function	rRNA binding
A	0033677	molecular_function	DNA/RNA helicase activity
A	0034458	molecular_function	3'-5' RNA helicase activity
A	0042254	biological_process	ribosome biogenesis
A	0043531	molecular_function	ADP binding
B	0000027	biological_process	ribosomal large subunit assembly
B	0000166	molecular_function	nucleotide binding
B	0003676	molecular_function	nucleic acid binding
B	0003723	molecular_function	RNA binding
B	0003724	molecular_function	RNA helicase activity
B	0004386	molecular_function	helicase activity
B	0005524	molecular_function	ATP binding
B	0005737	cellular_component	cytoplasm
B	0005829	cellular_component	cytosol
B	0016787	molecular_function	hydrolase activity
B	0016887	molecular_function	ATP hydrolysis activity
B	0019843	molecular_function	rRNA binding
B	0033677	molecular_function	DNA/RNA helicase activity
B	0034458	molecular_function	3'-5' RNA helicase activity
B	0042254	biological_process	ribosome biogenesis
B	0043531	molecular_function	ADP binding
E	0000027	biological_process	ribosomal large subunit assembly
E	0000166	molecular_function	nucleotide binding
E	0003676	molecular_function	nucleic acid binding
E	0003723	molecular_function	RNA binding
E	0003724	molecular_function	RNA helicase activity
E	0004386	molecular_function	helicase activity
E	0005524	molecular_function	ATP binding
E	0005737	cellular_component	cytoplasm
E	0005829	cellular_component	cytosol
E	0016787	molecular_function	hydrolase activity
E	0016887	molecular_function	ATP hydrolysis activity
E	0019843	molecular_function	rRNA binding
E	0033677	molecular_function	DNA/RNA helicase activity
E	0034458	molecular_function	3'-5' RNA helicase activity
E	0042254	biological_process	ribosome biogenesis
E	0043531	molecular_function	ADP binding
F	0000027	biological_process	ribosomal large subunit assembly
F	0000166	molecular_function	nucleotide binding
F	0003676	molecular_function	nucleic acid binding
F	0003723	molecular_function	RNA binding
F	0003724	molecular_function	RNA helicase activity
F	0004386	molecular_function	helicase activity
F	0005524	molecular_function	ATP binding
F	0005737	cellular_component	cytoplasm
F	0005829	cellular_component	cytosol
F	0016787	molecular_function	hydrolase activity
F	0016887	molecular_function	ATP hydrolysis activity
F	0019843	molecular_function	rRNA binding
F	0033677	molecular_function	DNA/RNA helicase activity
F	0034458	molecular_function	3'-5' RNA helicase activity
F	0042254	biological_process	ribosome biogenesis
F	0043531	molecular_function	ADP binding
I	0000027	biological_process	ribosomal large subunit assembly
I	0000166	molecular_function	nucleotide binding
I	0003676	molecular_function	nucleic acid binding
I	0003723	molecular_function	RNA binding
I	0003724	molecular_function	RNA helicase activity
I	0004386	molecular_function	helicase activity
I	0005524	molecular_function	ATP binding
I	0005737	cellular_component	cytoplasm
I	0005829	cellular_component	cytosol
I	0016787	molecular_function	hydrolase activity
I	0016887	molecular_function	ATP hydrolysis activity
I	0019843	molecular_function	rRNA binding
I	0033677	molecular_function	DNA/RNA helicase activity
I	0034458	molecular_function	3'-5' RNA helicase activity
I	0042254	biological_process	ribosome biogenesis
I	0043531	molecular_function	ADP binding
J	0000027	biological_process	ribosomal large subunit assembly
J	0000166	molecular_function	nucleotide binding
J	0003676	molecular_function	nucleic acid binding
J	0003723	molecular_function	RNA binding
J	0003724	molecular_function	RNA helicase activity
J	0004386	molecular_function	helicase activity
J	0005524	molecular_function	ATP binding
J	0005737	cellular_component	cytoplasm
J	0005829	cellular_component	cytosol
J	0016787	molecular_function	hydrolase activity
J	0016887	molecular_function	ATP hydrolysis activity
J	0019843	molecular_function	rRNA binding
J	0033677	molecular_function	DNA/RNA helicase activity
J	0034458	molecular_function	3'-5' RNA helicase activity
J	0042254	biological_process	ribosome biogenesis
J	0043531	molecular_function	ADP binding

Functional Information from PROSITE/UniProt

site_id	PS00039
Number of Residues	9
Details	DEAD_ATP_HELICASE DEAD-box subfamily ATP-dependent helicases signature. VMDEADRmL

Chain	Residue	Details
A	VAL151-LEU159

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1026
Details	Domain: {"description":"Helicase ATP-binding","evidences":[{"source":"HAMAP-Rule","id":"MF_00965","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	292
Details	Domain: {"description":"Helicase C-terminal","evidences":[{"source":"HAMAP-Rule","id":"MF_00965","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	222
Details	Region: {"description":"Involved in 23S rRNA binding","evidences":[{"source":"HAMAP-Rule","id":"MF_00965","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	168
Details	Motif: {"description":"Q motif"}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	18
Details	Motif: {"description":"DEAD box"}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	42
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00965","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---