Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7OBQ

SRP-SR at the distal site conformation

Functional Information from GO Data
ChainGOidnamespacecontents
q0003723molecular_functionRNA binding
q0005634cellular_componentnucleus
q0005654cellular_componentnucleoplasm
q0005730cellular_componentnucleolus
q0005737cellular_componentcytoplasm
q0005786cellular_componentsignal recognition particle, endoplasmic reticulum targeting
q0006614biological_processSRP-dependent cotranslational protein targeting to membrane
q0006617biological_processSRP-dependent cotranslational protein targeting to membrane, signal sequence recognition
q0008312molecular_function7S RNA binding
q0048500cellular_componentsignal recognition particle
u0003723molecular_functionRNA binding
u0005047molecular_functionsignal recognition particle binding
u0005634cellular_componentnucleus
u0005730cellular_componentnucleolus
u0005737cellular_componentcytoplasm
u0005783cellular_componentendoplasmic reticulum
u0005786cellular_componentsignal recognition particle, endoplasmic reticulum targeting
u0005829cellular_componentcytosol
u0006614biological_processSRP-dependent cotranslational protein targeting to membrane
u0008312molecular_function7S RNA binding
u0030942molecular_functionendoplasmic reticulum signal peptide binding
v0005525molecular_functionGTP binding
v0005737cellular_componentcytoplasm
v0005789cellular_componentendoplasmic reticulum membrane
v0005794cellular_componentGolgi apparatus
v0005881cellular_componentcytoplasmic microtubule
v0006886biological_processintracellular protein transport
v0016020cellular_componentmembrane
v0016192biological_processvesicle-mediated transport
x0003723molecular_functionRNA binding
x0003924molecular_functionGTPase activity
x0005525molecular_functionGTP binding
x0005634cellular_componentnucleus
x0005737cellular_componentcytoplasm
x0005783cellular_componentendoplasmic reticulum
x0005786cellular_componentsignal recognition particle, endoplasmic reticulum targeting
x0005829cellular_componentcytosol
x0006614biological_processSRP-dependent cotranslational protein targeting to membrane
x0006616biological_processSRP-dependent cotranslational protein targeting to membrane, translocation
x0006617biological_processSRP-dependent cotranslational protein targeting to membrane, signal sequence recognition
x0008312molecular_function7S RNA binding
x0016607cellular_componentnuclear speck
x0016787molecular_functionhydrolase activity
x0016887molecular_functionATP hydrolysis activity
x0019003molecular_functionGDP binding
x0030593biological_processneutrophil chemotaxis
x0030851biological_processgranulocyte differentiation
x0030942molecular_functionendoplasmic reticulum signal peptide binding
x0031017biological_processexocrine pancreas development
x0045047biological_processprotein targeting to ER
x0048500cellular_componentsignal recognition particle
y0003924molecular_functionGTPase activity
y0005047molecular_functionsignal recognition particle binding
y0005525molecular_functionGTP binding
y0005785cellular_componentsignal recognition particle receptor complex
y0005789cellular_componentendoplasmic reticulum membrane
y0006614biological_processSRP-dependent cotranslational protein targeting to membrane
y0006886biological_processintracellular protein transport
y0016020cellular_componentmembrane
y0016887molecular_functionATP hydrolysis activity
y0045047biological_processprotein targeting to ER
z0005737cellular_componentcytoplasm
z0005783cellular_componentendoplasmic reticulum
z0005786cellular_componentsignal recognition particle, endoplasmic reticulum targeting
z0005829cellular_componentcytosol
z0006614biological_processSRP-dependent cotranslational protein targeting to membrane
z0008312molecular_function7S RNA binding
z0043022molecular_functionribosome binding
z0048500cellular_componentsignal recognition particle
Functional Information from PROSITE/UniProt
site_idPS00300
Number of Residues14
DetailsSRP54 SRP54-type proteins GTP-binding domain signature. PIvFVGTGQtYcdL
ChainResidueDetails
yPRO609-LEU622
xPRO269-PHE282

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: N-acetylalanine; alternate => ECO:0000250|UniProtKB:O76094
ChainResidueDetails
zALA2
xASP190
xTHR248

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:O76094
ChainResidueDetails
zTHR571
zTHR618

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:O76094
ChainResidueDetails
zSER630
zSER635

site_idSWS_FT_FI4
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0000250|UniProtKB:O76094
ChainResidueDetails
zLYS391

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon