7OBB
Cryo-EM structure of human RNA Polymerase I Open Complex
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
A | 0000785 | cellular_component | chromatin |
A | 0003677 | molecular_function | DNA binding |
A | 0003682 | molecular_function | chromatin binding |
A | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
A | 0005515 | molecular_function | protein binding |
A | 0005634 | cellular_component | nucleus |
A | 0005654 | cellular_component | nucleoplasm |
A | 0005694 | cellular_component | chromosome |
A | 0005730 | cellular_component | nucleolus |
A | 0005736 | cellular_component | RNA polymerase I complex |
A | 0006351 | biological_process | DNA-templated transcription |
A | 0006360 | biological_process | transcription by RNA polymerase I |
A | 0008270 | molecular_function | zinc ion binding |
A | 0016740 | molecular_function | transferase activity |
A | 0016779 | molecular_function | nucleotidyltransferase activity |
A | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
A | 0042790 | biological_process | nucleolar large rRNA transcription by RNA polymerase I |
A | 0046872 | molecular_function | metal ion binding |
A | 0071667 | molecular_function | DNA/RNA hybrid binding |
A | 1904750 | biological_process | negative regulation of protein localization to nucleolus |
B | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
B | 0001650 | cellular_component | fibrillar center |
B | 0003677 | molecular_function | DNA binding |
B | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
B | 0005515 | molecular_function | protein binding |
B | 0005634 | cellular_component | nucleus |
B | 0005654 | cellular_component | nucleoplasm |
B | 0005694 | cellular_component | chromosome |
B | 0005730 | cellular_component | nucleolus |
B | 0005736 | cellular_component | RNA polymerase I complex |
B | 0005829 | cellular_component | cytosol |
B | 0006351 | biological_process | DNA-templated transcription |
B | 0007566 | biological_process | embryo implantation |
B | 0008270 | molecular_function | zinc ion binding |
B | 0009303 | biological_process | rRNA transcription |
B | 0014029 | biological_process | neural crest formation |
B | 0016740 | molecular_function | transferase activity |
B | 0016779 | molecular_function | nucleotidyltransferase activity |
B | 0017126 | biological_process | nucleologenesis |
B | 0032549 | molecular_function | ribonucleoside binding |
B | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
B | 0046872 | molecular_function | metal ion binding |
B | 0071667 | molecular_function | DNA/RNA hybrid binding |
C | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
C | 0001650 | cellular_component | fibrillar center |
C | 0003677 | molecular_function | DNA binding |
C | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
C | 0005515 | molecular_function | protein binding |
C | 0005634 | cellular_component | nucleus |
C | 0005654 | cellular_component | nucleoplasm |
C | 0005666 | cellular_component | RNA polymerase III complex |
C | 0005730 | cellular_component | nucleolus |
C | 0005736 | cellular_component | RNA polymerase I complex |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0006351 | biological_process | DNA-templated transcription |
C | 0006360 | biological_process | transcription by RNA polymerase I |
C | 0046983 | molecular_function | protein dimerization activity |
E | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
E | 0003677 | molecular_function | DNA binding |
E | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
E | 0005515 | molecular_function | protein binding |
E | 0005634 | cellular_component | nucleus |
E | 0005654 | cellular_component | nucleoplasm |
E | 0005665 | cellular_component | RNA polymerase II, core complex |
E | 0005666 | cellular_component | RNA polymerase III complex |
E | 0005730 | cellular_component | nucleolus |
E | 0005736 | cellular_component | RNA polymerase I complex |
E | 0005829 | cellular_component | cytosol |
E | 0006351 | biological_process | DNA-templated transcription |
E | 0006362 | biological_process | transcription elongation by RNA polymerase I |
E | 0006366 | biological_process | transcription by RNA polymerase II |
E | 0042797 | biological_process | tRNA transcription by RNA polymerase III |
E | 0050821 | biological_process | protein stabilization |
E | 1990062 | cellular_component | RPAP3/R2TP/prefoldin-like complex |
F | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
F | 0001650 | cellular_component | fibrillar center |
F | 0003677 | molecular_function | DNA binding |
F | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
F | 0005634 | cellular_component | nucleus |
F | 0005654 | cellular_component | nucleoplasm |
F | 0005665 | cellular_component | RNA polymerase II, core complex |
F | 0005666 | cellular_component | RNA polymerase III complex |
F | 0005730 | cellular_component | nucleolus |
F | 0005736 | cellular_component | RNA polymerase I complex |
F | 0005829 | cellular_component | cytosol |
F | 0006351 | biological_process | DNA-templated transcription |
F | 0006360 | biological_process | transcription by RNA polymerase I |
F | 0006366 | biological_process | transcription by RNA polymerase II |
F | 0042797 | biological_process | tRNA transcription by RNA polymerase III |
G | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
G | 0005634 | cellular_component | nucleus |
G | 0005654 | cellular_component | nucleoplasm |
G | 0005730 | cellular_component | nucleolus |
G | 0005736 | cellular_component | RNA polymerase I complex |
G | 0006351 | biological_process | DNA-templated transcription |
G | 0006352 | biological_process | DNA-templated transcription initiation |
G | 0006362 | biological_process | transcription elongation by RNA polymerase I |
G | 1990830 | biological_process | cellular response to leukemia inhibitory factor |
H | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
H | 0003677 | molecular_function | DNA binding |
H | 0003697 | molecular_function | single-stranded DNA binding |
H | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
H | 0005634 | cellular_component | nucleus |
H | 0005654 | cellular_component | nucleoplasm |
H | 0005665 | cellular_component | RNA polymerase II, core complex |
H | 0005666 | cellular_component | RNA polymerase III complex |
H | 0005730 | cellular_component | nucleolus |
H | 0005736 | cellular_component | RNA polymerase I complex |
H | 0005829 | cellular_component | cytosol |
H | 0006351 | biological_process | DNA-templated transcription |
H | 0006366 | biological_process | transcription by RNA polymerase II |
H | 0032993 | cellular_component | protein-DNA complex |
I | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
I | 0003676 | molecular_function | nucleic acid binding |
I | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
I | 0005515 | molecular_function | protein binding |
I | 0005634 | cellular_component | nucleus |
I | 0005654 | cellular_component | nucleoplasm |
I | 0005730 | cellular_component | nucleolus |
I | 0005736 | cellular_component | RNA polymerase I complex |
I | 0006139 | biological_process | nucleobase-containing compound metabolic process |
I | 0006351 | biological_process | DNA-templated transcription |
I | 0006363 | biological_process | termination of RNA polymerase I transcription |
I | 0008270 | molecular_function | zinc ion binding |
I | 0046872 | molecular_function | metal ion binding |
J | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
J | 0003677 | molecular_function | DNA binding |
J | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
J | 0005515 | molecular_function | protein binding |
J | 0005634 | cellular_component | nucleus |
J | 0005654 | cellular_component | nucleoplasm |
J | 0005665 | cellular_component | RNA polymerase II, core complex |
J | 0005666 | cellular_component | RNA polymerase III complex |
J | 0005730 | cellular_component | nucleolus |
J | 0005736 | cellular_component | RNA polymerase I complex |
J | 0005829 | cellular_component | cytosol |
J | 0006351 | biological_process | DNA-templated transcription |
J | 0006356 | biological_process | regulation of transcription by RNA polymerase I |
J | 0006360 | biological_process | transcription by RNA polymerase I |
J | 0006366 | biological_process | transcription by RNA polymerase II |
J | 0008270 | molecular_function | zinc ion binding |
J | 0042797 | biological_process | tRNA transcription by RNA polymerase III |
J | 0046872 | molecular_function | metal ion binding |
K | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
K | 0003677 | molecular_function | DNA binding |
K | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
K | 0005515 | molecular_function | protein binding |
K | 0005634 | cellular_component | nucleus |
K | 0005666 | cellular_component | RNA polymerase III complex |
K | 0005730 | cellular_component | nucleolus |
K | 0005736 | cellular_component | RNA polymerase I complex |
K | 0006351 | biological_process | DNA-templated transcription |
K | 0006362 | biological_process | transcription elongation by RNA polymerase I |
K | 0006383 | biological_process | transcription by RNA polymerase III |
K | 0046983 | molecular_function | protein dimerization activity |
K | 0055029 | cellular_component | nuclear DNA-directed RNA polymerase complex |
L | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
L | 0003677 | molecular_function | DNA binding |
L | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
L | 0005515 | molecular_function | protein binding |
L | 0005634 | cellular_component | nucleus |
L | 0005654 | cellular_component | nucleoplasm |
L | 0005665 | cellular_component | RNA polymerase II, core complex |
L | 0005666 | cellular_component | RNA polymerase III complex |
L | 0005730 | cellular_component | nucleolus |
L | 0005736 | cellular_component | RNA polymerase I complex |
L | 0005829 | cellular_component | cytosol |
L | 0006351 | biological_process | DNA-templated transcription |
L | 0006356 | biological_process | regulation of transcription by RNA polymerase I |
L | 0006366 | biological_process | transcription by RNA polymerase II |
L | 0006383 | biological_process | transcription by RNA polymerase III |
L | 0008270 | molecular_function | zinc ion binding |
L | 0046872 | molecular_function | metal ion binding |
M | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
M | 0001179 | molecular_function | RNA polymerase I general transcription initiation factor binding |
M | 0001188 | biological_process | RNA polymerase I preinitiation complex assembly |
M | 0001650 | cellular_component | fibrillar center |
M | 0003677 | molecular_function | DNA binding |
M | 0005515 | molecular_function | protein binding |
M | 0005634 | cellular_component | nucleus |
M | 0005654 | cellular_component | nucleoplasm |
M | 0005730 | cellular_component | nucleolus |
M | 0005736 | cellular_component | RNA polymerase I complex |
M | 0006351 | biological_process | DNA-templated transcription |
M | 0006361 | biological_process | transcription initiation at RNA polymerase I promoter |
M | 0006362 | biological_process | transcription elongation by RNA polymerase I |
M | 0042790 | biological_process | nucleolar large rRNA transcription by RNA polymerase I |
N | 0000120 | cellular_component | RNA polymerase I transcription regulator complex |
N | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
N | 0001650 | cellular_component | fibrillar center |
N | 0003723 | molecular_function | RNA binding |
N | 0005515 | molecular_function | protein binding |
N | 0005634 | cellular_component | nucleus |
N | 0005654 | cellular_component | nucleoplasm |
N | 0005694 | cellular_component | chromosome |
N | 0005730 | cellular_component | nucleolus |
N | 0005736 | cellular_component | RNA polymerase I complex |
N | 0005739 | cellular_component | mitochondrion |
N | 0005829 | cellular_component | cytosol |
N | 0006360 | biological_process | transcription by RNA polymerase I |
N | 0006361 | biological_process | transcription initiation at RNA polymerase I promoter |
N | 0007169 | biological_process | cell surface receptor protein tyrosine kinase signaling pathway |
N | 0009303 | biological_process | rRNA transcription |
Functional Information from PROSITE/UniProt
site_id | PS00446 |
Number of Residues | 41 |
Details | RNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NAFRRillaevptmAvekVlvynNtSivqDEiLAhRLGLIP |
Chain | Residue | Details |
C | ASN74-PRO114 |
site_id | PS00466 |
Number of Residues | 36 |
Details | ZF_TFIIS_1 Zinc finger TFIIS-type signature. CprCghegmayhtRQMRSaDEGqtvfytCtn...CkfqE |
Chain | Residue | Details |
I | CYS87-GLU122 |
site_id | PS01030 |
Number of Residues | 23 |
Details | RNA_POL_M_15KD RNA polymerases M / 15 Kd subunits signature. FCSDCGSVLplpgaqdtvt....CirC |
Chain | Residue | Details |
I | PHE19-CYS41 |
site_id | PS01110 |
Number of Residues | 14 |
Details | RNA_POL_H_23KD RNA polymerases H / 23 Kd subunits signature. HELVPEHvvMtkEE |
Chain | Residue | Details |
E | HIS142-GLU155 |
site_id | PS01111 |
Number of Residues | 15 |
Details | RNA_POL_K_14KD RNA polymerases K / 14 to 18 Kd subunits signature. TkYErARvLGtRAlQ |
Chain | Residue | Details |
F | THR58-GLN72 |
site_id | PS01112 |
Number of Residues | 10 |
Details | RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IIPVrCFTCG |
Chain | Residue | Details |
J | ILE2-GLY11 |
site_id | PS01154 |
Number of Residues | 32 |
Details | RNA_POL_L_13KD RNA polymerases L / 13 to 16 Kd subunits signature. LheEdHTLgNsLrymImknpeVefcgYtttHP |
Chain | Residue | Details |
K | LEU44-PRO75 |
site_id | PS01166 |
Number of Residues | 13 |
Details | RNA_POL_BETA RNA polymerases beta chain signature. GdKFASrHGQKGI |
Chain | Residue | Details |
B | GLY880-ILE892 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 91 |
Details | Region: {"description":"Clamp","evidences":[{"source":"PubMed","id":"34671025","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 13 |
Details | Region: {"description":"Rudder","evidences":[{"source":"PubMed","id":"34671025","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 78 |
Details | Region: {"description":"Funnel","evidences":[{"source":"PubMed","id":"34671025","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 95 |
Details | Region: {"description":"Mediates the interaction with TOP2A","evidences":[{"source":"PubMed","id":"36271492","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 10 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"34671025","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"34887565","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7OB9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7VBA","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 9 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"34887565","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7OB9","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 4 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"34671025","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7VBA","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P24928","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI9 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P04050","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI10 |
Number of Residues | 2 |
Details | Site: {"description":"NTP recognition and base pairing","evidences":[{"source":"PubMed","id":"34671025","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI11 |
Number of Residues | 31 |
Details | Zinc finger: {"description":"C4-type","evidences":[{"source":"PubMed","id":"34671025","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"34887565","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7OB9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7VBA","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI12 |
Number of Residues | 46 |
Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI13 |
Number of Residues | 14 |
Details | Region: {"description":"Loop B","evidences":[{"source":"PubMed","id":"34671025","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI14 |
Number of Residues | 11 |
Details | Region: {"description":"Loop A","evidences":[{"source":"PubMed","id":"34671025","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI15 |
Number of Residues | 14 |
Details | Region: {"description":"Fork loop 1","evidences":[{"source":"PubMed","id":"34671025","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI16 |
Number of Residues | 15 |
Details | Region: {"description":"Fork loop 2","evidences":[{"source":"PubMed","id":"34671025","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI17 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P08518","evidenceCode":"ECO:0000250"},{"source":"UniProtKB","id":"P30876","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI18 |
Number of Residues | 1 |
Details | Site: {"description":"Active site gating; blocks backward movement of nascent RNA","evidences":[{"source":"PubMed","id":"34671025","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI19 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI20 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N-acetylmethionine","evidences":[{"source":"PubMed","id":"19413330","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI21 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI22 |
Number of Residues | 24 |
Details | Region: {"description":"Non-specific ssDNA binding"} |
Chain | Residue | Details |
site_id | SWS_FT_FI23 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N-acetylalanine","evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"AUG-2005","submissionDatabase":"UniProtKB","authors":["Bienvenut W.V."]}},{"source":"PubMed","id":"19413330","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22223895","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI24 |
Number of Residues | 21 |
Details | Zinc finger: {"description":"C4-type","evidences":[{"source":"PubMed","id":"34887565","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7OB9","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI25 |
Number of Residues | 40 |
Details | Zinc finger: {"description":"TFIIS-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00472","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI26 |
Number of Residues | 1 |
Details | Motif: {"description":"Hairpin","evidences":[{"source":"UniProtKB","id":"Q9Y2Y1","evidenceCode":"ECO:0000250"},{"source":"PubMed","id":"34671025","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI27 |
Number of Residues | 4 |
Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10145","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"34887565","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7OB9","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI28 |
Number of Residues | 4 |
Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00472","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI29 |
Number of Residues | 3 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"27193682","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33558764","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33558766","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33674783","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5IY6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7AE1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7D58","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7DN3","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI30 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"27193682","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33558764","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33674783","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5IY6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7AE1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7DN3","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI31 |
Number of Residues | 20 |
Details | Zinc finger: {"description":"C4-type","evidences":[{"source":"PubMed","id":"33558764","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33558766","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33674783","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DN3","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"7AE1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7D58","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI32 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"27193682","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33558764","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33558766","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33674783","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DN3","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"5IY6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7AE1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7D58","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI33 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"27193682","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33558764","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5IY6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7AE1","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI34 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"27193682","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33558764","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33558766","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5IY6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7AE1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7D58","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI35 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"27193682","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33558766","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33674783","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7DN3","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"5IY6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7D58","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI36 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI37 |
Number of Residues | 12 |
Details | Compositional bias: {"description":"Pro residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI38 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI39 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"16809778","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI40 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI41 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"21406692","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |