7LRC
Cryo-EM of the SLFN12-PDE3A complex: PDE3A body refinement
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004540 | molecular_function | RNA nuclease activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005829 | cellular_component | cytosol |
| A | 0016075 | biological_process | rRNA catabolic process |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0043022 | molecular_function | ribosome binding |
| A | 0097190 | biological_process | apoptotic signaling pathway |
| B | 0004114 | molecular_function | 3',5'-cyclic-nucleotide phosphodiesterase activity |
| B | 0007165 | biological_process | signal transduction |
| B | 0008081 | molecular_function | phosphoric diester hydrolase activity |
| C | 0004114 | molecular_function | 3',5'-cyclic-nucleotide phosphodiesterase activity |
| C | 0007165 | biological_process | signal transduction |
| C | 0008081 | molecular_function | phosphoric diester hydrolase activity |
| D | 0004540 | molecular_function | RNA nuclease activity |
| D | 0005515 | molecular_function | protein binding |
| D | 0005634 | cellular_component | nucleus |
| D | 0005829 | cellular_component | cytosol |
| D | 0016075 | biological_process | rRNA catabolic process |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0043022 | molecular_function | ribosome binding |
| D | 0097190 | biological_process | apoptotic signaling pathway |
Functional Information from PROSITE/UniProt
| site_id | PS00126 |
| Number of Residues | 12 |
| Details | PDEASE_I_1 3'5'-cyclic nucleotide phosphodiesterase domain signature. HDYdHpGrtNaF |
| Chain | Residue | Details |
| B | HIS836-PHE847 |
| site_id | PS00216 |
| Number of Residues | 17 |
| Details | SUGAR_TRANSPORT_1 Sugar transport proteins signature 1. IFDLVENIGRKcgril.S |
| Chain | Residue | Details |
| B | ILE696-SER712 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Proton donor","evidences":[{"source":"UniProtKB","id":"O76083","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"34272366","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7L29","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"34272366","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7KWE","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7L27","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7L28","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7L29","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 18 |
| Details | Region: {"description":"Mediates interaction with PDE3A","evidences":[{"source":"PubMed","id":"34272366","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
