7KZ6
Crystal structure of KabA from Bacillus cereus UW85 with bound cofactor PMP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000271 | biological_process | polysaccharide biosynthetic process |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0008483 | molecular_function | transaminase activity |
| A | 0030170 | molecular_function | pyridoxal phosphate binding |
| B | 0000271 | biological_process | polysaccharide biosynthetic process |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0008483 | molecular_function | transaminase activity |
| B | 0030170 | molecular_function | pyridoxal phosphate binding |
| C | 0000271 | biological_process | polysaccharide biosynthetic process |
| C | 0003824 | molecular_function | catalytic activity |
| C | 0008483 | molecular_function | transaminase activity |
| C | 0030170 | molecular_function | pyridoxal phosphate binding |
| D | 0000271 | biological_process | polysaccharide biosynthetic process |
| D | 0003824 | molecular_function | catalytic activity |
| D | 0008483 | molecular_function | transaminase activity |
| D | 0030170 | molecular_function | pyridoxal phosphate binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 16 |
| Details | binding site for residue PMP A 501 |
| Chain | Residue |
| A | SER131 |
| A | SER249 |
| A | ASN251 |
| A | LYS254 |
| A | HOH720 |
| A | HOH735 |
| A | HOH769 |
| B | ASN299 |
| A | GLY132 |
| A | THR133 |
| A | SER157 |
| A | PHE158 |
| A | ALA160 |
| A | ASP229 |
| A | CYS231 |
| A | GLN232 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 502 |
| Chain | Residue |
| A | TYR279 |
| A | LEU294 |
| A | ASP295 |
| A | PHE296 |
| A | HOH618 |
| A | HOH701 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 503 |
| Chain | Residue |
| A | THR194 |
| A | GLN195 |
| A | THR197 |
| A | LYS198 |
| A | HOH787 |
| C | MET403 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 504 |
| Chain | Residue |
| A | ILE274 |
| A | ASN277 |
| A | VAL286 |
| A | HOH791 |
| A | HOH801 |
| A | HOH835 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 505 |
| Chain | Residue |
| A | GLU33 |
| A | ILE34 |
| A | ASN51 |
| A | HOH750 |
| A | HOH828 |
| B | GLU50 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 506 |
| Chain | Residue |
| A | TYR253 |
| A | LYS254 |
| A | HIS356 |
| A | TYR385 |
| A | HOH643 |
| A | HOH648 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | binding site for residue EDO A 507 |
| Chain | Residue |
| A | PRO100 |
| B | ASN80 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 508 |
| Chain | Residue |
| A | GLU75 |
| A | PRO78 |
| A | ARG81 |
| A | HIS423 |
| A | GLU430 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 509 |
| Chain | Residue |
| A | SER142 |
| A | ILE143 |
| A | ARG225 |
| site_id | AD1 |
| Number of Residues | 7 |
| Details | binding site for residue EDO A 510 |
| Chain | Residue |
| A | HIS12 |
| A | ASP119 |
| A | TYR120 |
| A | ASN122 |
| A | HOH719 |
| A | HOH756 |
| B | HOH632 |
| site_id | AD2 |
| Number of Residues | 6 |
| Details | binding site for residue EDO A 511 |
| Chain | Residue |
| A | MET77 |
| A | LEU82 |
| A | TYR253 |
| A | ARG324 |
| A | HIS356 |
| A | LEU422 |
| site_id | AD3 |
| Number of Residues | 8 |
| Details | binding site for residue EDO A 512 |
| Chain | Residue |
| A | LYS171 |
| A | PRO172 |
| A | VAL173 |
| A | TYR402 |
| A | HOH605 |
| A | HOH619 |
| A | HOH625 |
| A | HOH652 |
| site_id | AD4 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 513 |
| Chain | Residue |
| A | GLU115 |
| A | ASP119 |
| A | HOH855 |
| B | LEU6 |
| site_id | AD5 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 514 |
| Chain | Residue |
| A | GLU75 |
| A | MET77 |
| A | HOH612 |
| A | HOH746 |
| site_id | AD6 |
| Number of Residues | 16 |
| Details | binding site for residue PMP B 501 |
| Chain | Residue |
| B | HOH691 |
| B | HOH731 |
| A | ASN299 |
| B | SER131 |
| B | GLY132 |
| B | THR133 |
| B | SER157 |
| B | PHE158 |
| B | ALA160 |
| B | ASP229 |
| B | CYS231 |
| B | GLN232 |
| B | SER249 |
| B | ASN251 |
| B | LYS254 |
| B | HOH656 |
| site_id | AD7 |
| Number of Residues | 6 |
| Details | binding site for residue EDO B 502 |
| Chain | Residue |
| B | TYR279 |
| B | LEU294 |
| B | ASP295 |
| B | PHE296 |
| B | HOH736 |
| B | HOH756 |
| site_id | AD8 |
| Number of Residues | 7 |
| Details | binding site for residue EDO B 503 |
| Chain | Residue |
| B | ASN156 |
| B | TYR182 |
| B | TYR206 |
| B | LEU389 |
| B | HIS414 |
| B | ILE417 |
| B | HOH770 |
| site_id | AD9 |
| Number of Residues | 5 |
| Details | binding site for residue EDO B 504 |
| Chain | Residue |
| B | LEU397 |
| B | LYS400 |
| B | HOH610 |
| B | HOH623 |
| B | HOH646 |
| site_id | AE1 |
| Number of Residues | 17 |
| Details | binding site for residue PMP C 501 |
| Chain | Residue |
| C | SER131 |
| C | GLY132 |
| C | THR133 |
| C | SER157 |
| C | PHE158 |
| C | ALA160 |
| C | THR161 |
| C | ASP229 |
| C | CYS231 |
| C | GLN232 |
| C | SER249 |
| C | ASN251 |
| C | LYS254 |
| C | HOH714 |
| C | HOH743 |
| C | HOH758 |
| D | ASN299 |
| site_id | AE2 |
| Number of Residues | 9 |
| Details | binding site for residue EDO C 502 |
| Chain | Residue |
| C | TYR279 |
| C | LEU294 |
| C | ASP295 |
| C | PHE296 |
| C | HOH614 |
| C | HOH623 |
| C | HOH682 |
| C | HOH779 |
| C | HOH805 |
| site_id | AE3 |
| Number of Residues | 7 |
| Details | binding site for residue EDO C 503 |
| Chain | Residue |
| C | SER130 |
| C | ASP134 |
| C | ASN299 |
| C | SER300 |
| D | ASP134 |
| D | SER300 |
| D | HOH820 |
| site_id | AE4 |
| Number of Residues | 6 |
| Details | binding site for residue EDO C 504 |
| Chain | Residue |
| C | ASN156 |
| C | TYR206 |
| C | LEU389 |
| C | THR410 |
| C | HIS414 |
| C | ILE417 |
| site_id | AE5 |
| Number of Residues | 4 |
| Details | binding site for residue EDO C 505 |
| Chain | Residue |
| C | LYS371 |
| C | GLU381 |
| C | THR382 |
| C | ASP383 |
| site_id | AE6 |
| Number of Residues | 6 |
| Details | binding site for residue EDO C 506 |
| Chain | Residue |
| C | LYS96 |
| C | HOH608 |
| C | HOH650 |
| D | GLN85 |
| D | ILE88 |
| D | ASP89 |
| site_id | AE7 |
| Number of Residues | 4 |
| Details | binding site for residue EDO C 507 |
| Chain | Residue |
| C | LYS42 |
| C | GLU45 |
| C | SER86 |
| C | HOH719 |
| site_id | AE8 |
| Number of Residues | 5 |
| Details | binding site for residue EDO C 508 |
| Chain | Residue |
| C | LYS123 |
| C | GLU241 |
| C | TYR242 |
| C | GLY243 |
| C | HOH755 |
| site_id | AE9 |
| Number of Residues | 16 |
| Details | binding site for residue PMP D 501 |
| Chain | Residue |
| C | ASN299 |
| C | HOH762 |
| D | SER131 |
| D | GLY132 |
| D | THR133 |
| D | SER157 |
| D | PHE158 |
| D | ALA160 |
| D | ASP229 |
| D | CYS231 |
| D | GLN232 |
| D | SER249 |
| D | LYS254 |
| D | TYR386 |
| D | HOH861 |
| D | HOH906 |
| site_id | AF1 |
| Number of Residues | 8 |
| Details | binding site for residue EDO D 502 |
| Chain | Residue |
| C | LYS261 |
| D | THR105 |
| D | SER106 |
| D | LYS301 |
| D | ILE302 |
| D | ASP303 |
| D | HOH868 |
| D | HOH877 |
| site_id | AF2 |
| Number of Residues | 5 |
| Details | binding site for residue EDO D 503 |
| Chain | Residue |
| D | TYR279 |
| D | LEU294 |
| D | ASP295 |
| D | PHE296 |
| D | HOH857 |
| site_id | AF3 |
| Number of Residues | 8 |
| Details | binding site for residue EDO D 504 |
| Chain | Residue |
| D | GLU114 |
| D | GLU115 |
| D | GLY118 |
| D | LYS123 |
| D | LYS124 |
| D | HOH847 |
| D | HOH876 |
| D | HOH943 |
| site_id | AF4 |
| Number of Residues | 7 |
| Details | binding site for residue EDO D 505 |
| Chain | Residue |
| C | GLN376 |
| C | LEU377 |
| D | VAL388 |
| D | LYS392 |
| D | ASN394 |
| D | HOH808 |
| D | HOH914 |
| site_id | AF5 |
| Number of Residues | 7 |
| Details | binding site for residue EDO D 506 |
| Chain | Residue |
| D | LYS123 |
| D | GLY243 |
| D | ASP244 |
| D | THR267 |
| D | ASN268 |
| D | ASN269 |
| D | HOH830 |
