7KEH
Crystal structure from SARS-CoV-2 NendoU NSP15
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | binding site for residue B3P A 701 |
Chain | Residue |
A | PHE43 |
A | GLU44 |
A | TRP58 |
A | ASP91 |
A | HOH965 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue SO4 A 702 |
Chain | Residue |
A | THR340 |
A | HOH911 |
A | HIS234 |
A | GLY247 |
A | HIS249 |
A | LYS289 |
site_id | AC3 |
Number of Residues | 7 |
Details | binding site for residue B3P B 701 |
Chain | Residue |
B | PHE43 |
B | GLU44 |
B | TRP58 |
B | ASP91 |
B | HOH819 |
B | HOH832 |
B | HOH940 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue SO4 B 702 |
Chain | Residue |
B | HIS234 |
B | GLY247 |
B | HIS249 |
B | LYS289 |
B | THR340 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor; for uridylate-specific endoribonuclease nsp15 activity => ECO:0000269|PubMed:33504779, ECO:0000269|PubMed:33564093 |
Chain | Residue | Details |
B | HIS234 | |
A | HIS234 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | ACT_SITE: Proton acceptor; for uridylate-specific endoribonuclease nsp15 activity => ECO:0000269|PubMed:33504779, ECO:0000269|PubMed:33564093 |
Chain | Residue | Details |
B | HIS249 | |
A | HIS249 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | ACT_SITE: For uridylate-specific endoribonuclease nsp15 activity => ECO:0000269|PubMed:33504779 |
Chain | Residue | Details |
B | LYS289 | |
A | LYS289 |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:33504779, ECO:0000269|PubMed:33564093 |
Chain | Residue | Details |
B | LYS289 | |
A | LYS289 |
site_id | SWS_FT_FI5 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:33564093 |
Chain | Residue | Details |
B | THR340 | |
A | THR340 |
site_id | SWS_FT_FI6 |
Number of Residues | 2 |
Details | SITE: Transition state stabilizer => ECO:0000269|PubMed:33504779, ECO:0000269|PubMed:33564093 |
Chain | Residue | Details |
B | LYS289 | |
A | LYS289 |
site_id | SWS_FT_FI7 |
Number of Residues | 2 |
Details | SITE: Uracil recognition site => ECO:0000269|PubMed:33504779, ECO:0000269|PubMed:33564093 |
Chain | Residue | Details |
A | SER293 | |
B | SER293 |
site_id | SWS_FT_FI8 |
Number of Residues | 2 |
Details | SITE: Cleavage; by 3CL-PRO => ECO:0000250|UniProtKB:P0C6V3 |
Chain | Residue | Details |
A | GLN346 | |
B | GLN346 |