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7KDY

Crystal structure of Streptomyces tokunonesis TokK with hydroxycobalamin, 5'-deoxyadenosine, methionine, and (2R)-pantetheinylated carbapenam

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0005829cellular_componentcytosol
A0008168molecular_functionmethyltransferase activity
A0016740molecular_functiontransferase activity
A0017000biological_processantibiotic biosynthetic process
A0031419molecular_functioncobalamin binding
A0032259biological_processmethylation
A0046872molecular_functionmetal ion binding
A0051536molecular_functioniron-sulfur cluster binding
A0051539molecular_function4 iron, 4 sulfur cluster binding
B0003824molecular_functioncatalytic activity
B0005829cellular_componentcytosol
B0008168molecular_functionmethyltransferase activity
B0016740molecular_functiontransferase activity
B0017000biological_processantibiotic biosynthetic process
B0031419molecular_functioncobalamin binding
B0032259biological_processmethylation
B0046872molecular_functionmetal ion binding
B0051536molecular_functioniron-sulfur cluster binding
B0051539molecular_function4 iron, 4 sulfur cluster binding
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues450
DetailsDomain: {"description":"Radical SAM core","evidences":[{"source":"PROSITE-ProRule","id":"PRU01266","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"35110734","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7KDY","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues30
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"35110734","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7KDX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7KDY","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

248335

PDB entries from 2026-01-28

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