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7JP2

Crystal structure of TP0037 from Treponema pallidum, a D-lactate dehydrogenase

Functional Information from GO Data
ChainGOidnamespacecontents
A0008720molecular_functionD-lactate dehydrogenase (NAD+) activity
A0016491molecular_functionoxidoreductase activity
A0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
A0051287molecular_functionNAD binding
B0008720molecular_functionD-lactate dehydrogenase (NAD+) activity
B0016491molecular_functionoxidoreductase activity
B0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
B0051287molecular_functionNAD binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue EDO A 401
ChainResidue
APHE54
ATHR77
ATYR101
AHOH701
BTRP135

site_idAC2
Number of Residues6
Detailsbinding site for residue EDO A 402
ChainResidue
BARG9
BGLU11
ATRP135
AGLN136
ALYS137
AHOH618

site_idAC3
Number of Residues3
Detailsbinding site for residue CL A 403
ChainResidue
ATHR303
AHOH543
BGLU143

site_idAC4
Number of Residues4
Detailsbinding site for residue EDO B 401
ChainResidue
ATRP135
BTHR77
BTYR101
BHOH667

site_idAC5
Number of Residues8
Detailsbinding site for residue EDO B 402
ChainResidue
BLEU117
BGLU123
BTYR229
BALA254
BGLY255
BARG290
BHOH549
BHOH556

site_idAC6
Number of Residues8
Detailsbinding site for residue EDO B 403
ChainResidue
AARG131
APHE263
AHOH568
BASN272
BGLY273
BASN275
BPRO276
BILE277

site_idAC7
Number of Residues8
Detailsbinding site for residue EDO B 404
ChainResidue
AGLU125
AVAL128
BARG122
BILE291
BILE292
BTYR293
BHOH586
BHOH594

site_idAC8
Number of Residues4
Detailsbinding site for residue CL B 405
ChainResidue
AGLU143
BGLU302
BTHR303
BHOH560

Functional Information from PROSITE/UniProt
site_idPS00065
Number of Residues28
DetailsD_2_HYDROXYACID_DH_1 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. VGILGtGRIGqaaarlfkgvgaq.VVgFD
ChainResidueDetails
AVAL149-ASP176

site_idPS00670
Number of Residues23
DetailsD_2_HYDROXYACID_DH_2 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. LLstSDVIsLHmPatkdShhLiN
ChainResidueDetails
ALEU195-ASN217

site_idPS00671
Number of Residues17
DetailsD_2_HYDROXYACID_DH_3 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. MKdGvYLVNtARGaVID
ChainResidueDetails
AMET224-ASP240

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"evidences":[{"source":"UniProtKB","id":"P26297","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"UniProtKB","id":"P26297","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues10
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P30901","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P26297","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

243911

PDB entries from 2025-10-29

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