7JMK
GTP-specific succinyl-CoA synthetase complexed with Mg-GDP in space group P32
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003824 | molecular_function | catalytic activity |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0004775 | molecular_function | succinate-CoA ligase (ADP-forming) activity |
| B | 0004776 | molecular_function | succinate-CoA ligase (GDP-forming) activity |
| B | 0005515 | molecular_function | protein binding |
| B | 0005524 | molecular_function | ATP binding |
| B | 0005525 | molecular_function | GTP binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005739 | cellular_component | mitochondrion |
| B | 0006099 | biological_process | tricarboxylic acid cycle |
| B | 0006104 | biological_process | succinyl-CoA metabolic process |
| B | 0016874 | molecular_function | ligase activity |
| B | 0042709 | cellular_component | succinate-CoA ligase complex |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0003824 | molecular_function | catalytic activity |
| D | 0003824 | molecular_function | catalytic activity |
| D | 0004775 | molecular_function | succinate-CoA ligase (ADP-forming) activity |
| D | 0004776 | molecular_function | succinate-CoA ligase (GDP-forming) activity |
| D | 0005515 | molecular_function | protein binding |
| D | 0005524 | molecular_function | ATP binding |
| D | 0005525 | molecular_function | GTP binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005739 | cellular_component | mitochondrion |
| D | 0006099 | biological_process | tricarboxylic acid cycle |
| D | 0006104 | biological_process | succinyl-CoA metabolic process |
| D | 0016874 | molecular_function | ligase activity |
| D | 0042709 | cellular_component | succinate-CoA ligase complex |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PROSITE/UniProt
| site_id | PS00399 |
| Number of Residues | 14 |
| Details | SUCCINYL_COA_LIG_2 ATP-citrate lyase / succinyl-CoA ligases family active site. GltAppgr...RMGHAG |
| Chain | Residue | Details |
| A | GLY248-GLY261 |
| site_id | PS01216 |
| Number of Residues | 30 |
| Details | SUCCINYL_COA_LIG_1 ATP-citrate lyase / succinyl-CoA ligases family signature 1. SRSGTLTyEavhqttqvglGqslcVGIGGD |
| Chain | Residue | Details |
| A | SER160-ASP189 |
| site_id | PS01217 |
| Number of Residues | 26 |
| Details | SUCCINYL_COA_LIG_3 ATP-citrate lyase / succinyl-CoA ligases family signature 3. GnIacFvNGAGLAmatcDiIflngGK |
| Chain | Residue | Details |
| B | GLY264-LYS289 | |
| D | GLY264-LYS289 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 3 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_03221, ECO:0000269|PubMed:16481318 |
| Chain | Residue | Details |
| D | GLN20 | |
| D | GLY53 | |
| D | LEU109 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_03221, ECO:0000305|PubMed:16481318 |
| Chain | Residue | Details |
| D | ASN206 | |
| D | ASP220 | |
| A | ILE103 | |
| C | THR24 | |
| C | LYS50 | |
| C | ILE103 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_03221, ECO:0000269|PubMed:27487822 |
| Chain | Residue | Details |
| D | ASN271 | |
| D | GLY328 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | SITE: Important for substrate specificity => ECO:0000255|HAMAP-Rule:MF_03221 |
| Chain | Residue | Details |
| D | GLU42 | |
| D | ASP110 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 8 |
| Details | MOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:Q9Z2I8 |
| Chain | Residue | Details |
| D | LYS36 | |
| D | LYS95 | |
| D | LYS102 | |
| D | LYS163 | |
| D | LYS234 | |
| D | LYS310 | |
| D | LYS349 | |
| D | LYS386 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 2 |
| Details | MOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:Q9Z2I8 |
| Chain | Residue | Details |
| D | LYS41 | |
| D | LYS301 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 1 |
| Details | MOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q9Z2I8 |
| Chain | Residue | Details |
| D | SER124 | |
| C | LYS298 |
| site_id | SWS_FT_FI8 |
| Number of Residues | 2 |
| Details | MOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:Q96I99 |
| Chain | Residue | Details |
| D | LYS190 | |
| D | LYS254 |
