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7DWV

Cryo-EM structure of amyloid fibril formed by familial prion disease-related mutation E196K

Functional Information from GO Data
ChainGOidnamespacecontents
A0000122biological_processnegative regulation of transcription by RNA polymerase II
A0001540molecular_functionamyloid-beta binding
A0002020molecular_functionprotease binding
A0005507molecular_functioncopper ion binding
A0005515molecular_functionprotein binding
A0005521molecular_functionlamin binding
A0005539molecular_functionglycosaminoglycan binding
A0005737cellular_componentcytoplasm
A0005783cellular_componentendoplasmic reticulum
A0005794cellular_componentGolgi apparatus
A0005829cellular_componentcytosol
A0005886cellular_componentplasma membrane
A0006878biological_processintracellular copper ion homeostasis
A0006979biological_processresponse to oxidative stress
A0007611biological_processlearning or memory
A0007616biological_processlong-term memory
A0008017molecular_functionmicrotubule binding
A0009897cellular_componentexternal side of plasma membrane
A0009986cellular_componentcell surface
A0010955biological_processnegative regulation of protein processing
A0014069cellular_componentpostsynaptic density
A0015631molecular_functiontubulin binding
A0016020cellular_componentmembrane
A0016234cellular_componentinclusion body
A0019828molecular_functionaspartic-type endopeptidase inhibitor activity
A0019898cellular_componentextrinsic component of membrane
A0030425cellular_componentdendrite
A0031648biological_processprotein destabilization
A0031802molecular_functiontype 5 metabotropic glutamate receptor binding
A0031805molecular_functiontype 8 metabotropic glutamate receptor binding
A0032689biological_processnegative regulation of type II interferon production
A0032700biological_processnegative regulation of interleukin-17 production
A0032703biological_processnegative regulation of interleukin-2 production
A0035556biological_processintracellular signal transduction
A0038023molecular_functionsignaling receptor activity
A0042802molecular_functionidentical protein binding
A0043008molecular_functionATP-dependent protein binding
A0043066biological_processnegative regulation of apoptotic process
A0043195cellular_componentterminal bouton
A0043525biological_processpositive regulation of neuron apoptotic process
A0044325molecular_functiontransmembrane transporter binding
A0044877molecular_functionprotein-containing complex binding
A0045121cellular_componentmembrane raft
A0046007biological_processnegative regulation of activated T cell proliferation
A0046686biological_processresponse to cadmium ion
A0046688biological_processresponse to copper ion
A0046872molecular_functionmetal ion binding
A0050850biological_processpositive regulation of calcium-mediated signaling
A0050860biological_processnegative regulation of T cell receptor signaling pathway
A0051087molecular_functionprotein-folding chaperone binding
A0051260biological_processprotein homooligomerization
A0051726biological_processregulation of cell cycle
A0060090molecular_functionmolecular adaptor activity
A0070062cellular_componentextracellular exosome
A0070885biological_processnegative regulation of calcineurin-NFAT signaling cascade
A0071280biological_processcellular response to copper ion
A0090314biological_processpositive regulation of protein targeting to membrane
A0097062biological_processdendritic spine maintenance
A0098552cellular_componentside of membrane
A0098794cellular_componentpostsynapse
A0140677molecular_functionmolecular function activator activity
A0140693molecular_functionmolecular condensate scaffold activity
A1900272biological_processnegative regulation of long-term synaptic potentiation
A1900449biological_processregulation of glutamate receptor signaling pathway
A1900451biological_processpositive regulation of glutamate receptor signaling pathway
A1902430biological_processnegative regulation of amyloid-beta formation
A1902951biological_processnegative regulation of dendritic spine maintenance
A1902992biological_processnegative regulation of amyloid precursor protein catabolic process
A1903078biological_processpositive regulation of protein localization to plasma membrane
A1903135molecular_functioncupric ion binding
A1903136molecular_functioncuprous ion binding
A1904645biological_processresponse to amyloid-beta
A1904646biological_processcellular response to amyloid-beta
A1905664biological_processregulation of calcium ion import across plasma membrane
A1990535biological_processneuron projection maintenance
B0000122biological_processnegative regulation of transcription by RNA polymerase II
B0001540molecular_functionamyloid-beta binding
B0002020molecular_functionprotease binding
B0005507molecular_functioncopper ion binding
B0005515molecular_functionprotein binding
B0005521molecular_functionlamin binding
B0005539molecular_functionglycosaminoglycan binding
B0005737cellular_componentcytoplasm
B0005783cellular_componentendoplasmic reticulum
B0005794cellular_componentGolgi apparatus
B0005829cellular_componentcytosol
B0005886cellular_componentplasma membrane
B0006878biological_processintracellular copper ion homeostasis
B0006979biological_processresponse to oxidative stress
B0007611biological_processlearning or memory
B0007616biological_processlong-term memory
B0008017molecular_functionmicrotubule binding
B0009897cellular_componentexternal side of plasma membrane
B0009986cellular_componentcell surface
B0010955biological_processnegative regulation of protein processing
B0014069cellular_componentpostsynaptic density
B0015631molecular_functiontubulin binding
B0016020cellular_componentmembrane
B0016234cellular_componentinclusion body
B0019828molecular_functionaspartic-type endopeptidase inhibitor activity
B0019898cellular_componentextrinsic component of membrane
B0030425cellular_componentdendrite
B0031648biological_processprotein destabilization
B0031802molecular_functiontype 5 metabotropic glutamate receptor binding
B0031805molecular_functiontype 8 metabotropic glutamate receptor binding
B0032689biological_processnegative regulation of type II interferon production
B0032700biological_processnegative regulation of interleukin-17 production
B0032703biological_processnegative regulation of interleukin-2 production
B0035556biological_processintracellular signal transduction
B0038023molecular_functionsignaling receptor activity
B0042802molecular_functionidentical protein binding
B0043008molecular_functionATP-dependent protein binding
B0043066biological_processnegative regulation of apoptotic process
B0043195cellular_componentterminal bouton
B0043525biological_processpositive regulation of neuron apoptotic process
B0044325molecular_functiontransmembrane transporter binding
B0044877molecular_functionprotein-containing complex binding
B0045121cellular_componentmembrane raft
B0046007biological_processnegative regulation of activated T cell proliferation
B0046686biological_processresponse to cadmium ion
B0046688biological_processresponse to copper ion
B0046872molecular_functionmetal ion binding
B0050850biological_processpositive regulation of calcium-mediated signaling
B0050860biological_processnegative regulation of T cell receptor signaling pathway
B0051087molecular_functionprotein-folding chaperone binding
B0051260biological_processprotein homooligomerization
B0051726biological_processregulation of cell cycle
B0060090molecular_functionmolecular adaptor activity
B0070062cellular_componentextracellular exosome
B0070885biological_processnegative regulation of calcineurin-NFAT signaling cascade
B0071280biological_processcellular response to copper ion
B0090314biological_processpositive regulation of protein targeting to membrane
B0097062biological_processdendritic spine maintenance
B0098552cellular_componentside of membrane
B0098794cellular_componentpostsynapse
B0140677molecular_functionmolecular function activator activity
B0140693molecular_functionmolecular condensate scaffold activity
B1900272biological_processnegative regulation of long-term synaptic potentiation
B1900449biological_processregulation of glutamate receptor signaling pathway
B1900451biological_processpositive regulation of glutamate receptor signaling pathway
B1902430biological_processnegative regulation of amyloid-beta formation
B1902951biological_processnegative regulation of dendritic spine maintenance
B1902992biological_processnegative regulation of amyloid precursor protein catabolic process
B1903078biological_processpositive regulation of protein localization to plasma membrane
B1903135molecular_functioncupric ion binding
B1903136molecular_functioncuprous ion binding
B1904645biological_processresponse to amyloid-beta
B1904646biological_processcellular response to amyloid-beta
B1905664biological_processregulation of calcium ion import across plasma membrane
B1990535biological_processneuron projection maintenance
C0000122biological_processnegative regulation of transcription by RNA polymerase II
C0001540molecular_functionamyloid-beta binding
C0002020molecular_functionprotease binding
C0005507molecular_functioncopper ion binding
C0005515molecular_functionprotein binding
C0005521molecular_functionlamin binding
C0005539molecular_functionglycosaminoglycan binding
C0005737cellular_componentcytoplasm
C0005783cellular_componentendoplasmic reticulum
C0005794cellular_componentGolgi apparatus
C0005829cellular_componentcytosol
C0005886cellular_componentplasma membrane
C0006878biological_processintracellular copper ion homeostasis
C0006979biological_processresponse to oxidative stress
C0007611biological_processlearning or memory
C0007616biological_processlong-term memory
C0008017molecular_functionmicrotubule binding
C0009897cellular_componentexternal side of plasma membrane
C0009986cellular_componentcell surface
C0010955biological_processnegative regulation of protein processing
C0014069cellular_componentpostsynaptic density
C0015631molecular_functiontubulin binding
C0016020cellular_componentmembrane
C0016234cellular_componentinclusion body
C0019828molecular_functionaspartic-type endopeptidase inhibitor activity
C0019898cellular_componentextrinsic component of membrane
C0030425cellular_componentdendrite
C0031648biological_processprotein destabilization
C0031802molecular_functiontype 5 metabotropic glutamate receptor binding
C0031805molecular_functiontype 8 metabotropic glutamate receptor binding
C0032689biological_processnegative regulation of type II interferon production
C0032700biological_processnegative regulation of interleukin-17 production
C0032703biological_processnegative regulation of interleukin-2 production
C0035556biological_processintracellular signal transduction
C0038023molecular_functionsignaling receptor activity
C0042802molecular_functionidentical protein binding
C0043008molecular_functionATP-dependent protein binding
C0043066biological_processnegative regulation of apoptotic process
C0043195cellular_componentterminal bouton
C0043525biological_processpositive regulation of neuron apoptotic process
C0044325molecular_functiontransmembrane transporter binding
C0044877molecular_functionprotein-containing complex binding
C0045121cellular_componentmembrane raft
C0046007biological_processnegative regulation of activated T cell proliferation
C0046686biological_processresponse to cadmium ion
C0046688biological_processresponse to copper ion
C0046872molecular_functionmetal ion binding
C0050850biological_processpositive regulation of calcium-mediated signaling
C0050860biological_processnegative regulation of T cell receptor signaling pathway
C0051087molecular_functionprotein-folding chaperone binding
C0051260biological_processprotein homooligomerization
C0051726biological_processregulation of cell cycle
C0060090molecular_functionmolecular adaptor activity
C0070062cellular_componentextracellular exosome
C0070885biological_processnegative regulation of calcineurin-NFAT signaling cascade
C0071280biological_processcellular response to copper ion
C0090314biological_processpositive regulation of protein targeting to membrane
C0097062biological_processdendritic spine maintenance
C0098552cellular_componentside of membrane
C0098794cellular_componentpostsynapse
C0140677molecular_functionmolecular function activator activity
C0140693molecular_functionmolecular condensate scaffold activity
C1900272biological_processnegative regulation of long-term synaptic potentiation
C1900449biological_processregulation of glutamate receptor signaling pathway
C1900451biological_processpositive regulation of glutamate receptor signaling pathway
C1902430biological_processnegative regulation of amyloid-beta formation
C1902951biological_processnegative regulation of dendritic spine maintenance
C1902992biological_processnegative regulation of amyloid precursor protein catabolic process
C1903078biological_processpositive regulation of protein localization to plasma membrane
C1903135molecular_functioncupric ion binding
C1903136molecular_functioncuprous ion binding
C1904645biological_processresponse to amyloid-beta
C1904646biological_processcellular response to amyloid-beta
C1905664biological_processregulation of calcium ion import across plasma membrane
C1990535biological_processneuron projection maintenance
D0000122biological_processnegative regulation of transcription by RNA polymerase II
D0001540molecular_functionamyloid-beta binding
D0002020molecular_functionprotease binding
D0005507molecular_functioncopper ion binding
D0005515molecular_functionprotein binding
D0005521molecular_functionlamin binding
D0005539molecular_functionglycosaminoglycan binding
D0005737cellular_componentcytoplasm
D0005783cellular_componentendoplasmic reticulum
D0005794cellular_componentGolgi apparatus
D0005829cellular_componentcytosol
D0005886cellular_componentplasma membrane
D0006878biological_processintracellular copper ion homeostasis
D0006979biological_processresponse to oxidative stress
D0007611biological_processlearning or memory
D0007616biological_processlong-term memory
D0008017molecular_functionmicrotubule binding
D0009897cellular_componentexternal side of plasma membrane
D0009986cellular_componentcell surface
D0010955biological_processnegative regulation of protein processing
D0014069cellular_componentpostsynaptic density
D0015631molecular_functiontubulin binding
D0016020cellular_componentmembrane
D0016234cellular_componentinclusion body
D0019828molecular_functionaspartic-type endopeptidase inhibitor activity
D0019898cellular_componentextrinsic component of membrane
D0030425cellular_componentdendrite
D0031648biological_processprotein destabilization
D0031802molecular_functiontype 5 metabotropic glutamate receptor binding
D0031805molecular_functiontype 8 metabotropic glutamate receptor binding
D0032689biological_processnegative regulation of type II interferon production
D0032700biological_processnegative regulation of interleukin-17 production
D0032703biological_processnegative regulation of interleukin-2 production
D0035556biological_processintracellular signal transduction
D0038023molecular_functionsignaling receptor activity
D0042802molecular_functionidentical protein binding
D0043008molecular_functionATP-dependent protein binding
D0043066biological_processnegative regulation of apoptotic process
D0043195cellular_componentterminal bouton
D0043525biological_processpositive regulation of neuron apoptotic process
D0044325molecular_functiontransmembrane transporter binding
D0044877molecular_functionprotein-containing complex binding
D0045121cellular_componentmembrane raft
D0046007biological_processnegative regulation of activated T cell proliferation
D0046686biological_processresponse to cadmium ion
D0046688biological_processresponse to copper ion
D0046872molecular_functionmetal ion binding
D0050850biological_processpositive regulation of calcium-mediated signaling
D0050860biological_processnegative regulation of T cell receptor signaling pathway
D0051087molecular_functionprotein-folding chaperone binding
D0051260biological_processprotein homooligomerization
D0051726biological_processregulation of cell cycle
D0060090molecular_functionmolecular adaptor activity
D0070062cellular_componentextracellular exosome
D0070885biological_processnegative regulation of calcineurin-NFAT signaling cascade
D0071280biological_processcellular response to copper ion
D0090314biological_processpositive regulation of protein targeting to membrane
D0097062biological_processdendritic spine maintenance
D0098552cellular_componentside of membrane
D0098794cellular_componentpostsynapse
D0140677molecular_functionmolecular function activator activity
D0140693molecular_functionmolecular condensate scaffold activity
D1900272biological_processnegative regulation of long-term synaptic potentiation
D1900449biological_processregulation of glutamate receptor signaling pathway
D1900451biological_processpositive regulation of glutamate receptor signaling pathway
D1902430biological_processnegative regulation of amyloid-beta formation
D1902951biological_processnegative regulation of dendritic spine maintenance
D1902992biological_processnegative regulation of amyloid precursor protein catabolic process
D1903078biological_processpositive regulation of protein localization to plasma membrane
D1903135molecular_functioncupric ion binding
D1903136molecular_functioncuprous ion binding
D1904645biological_processresponse to amyloid-beta
D1904646biological_processcellular response to amyloid-beta
D1905664biological_processregulation of calcium ion import across plasma membrane
D1990535biological_processneuron projection maintenance
E0000122biological_processnegative regulation of transcription by RNA polymerase II
E0001540molecular_functionamyloid-beta binding
E0002020molecular_functionprotease binding
E0005507molecular_functioncopper ion binding
E0005515molecular_functionprotein binding
E0005521molecular_functionlamin binding
E0005539molecular_functionglycosaminoglycan binding
E0005737cellular_componentcytoplasm
E0005783cellular_componentendoplasmic reticulum
E0005794cellular_componentGolgi apparatus
E0005829cellular_componentcytosol
E0005886cellular_componentplasma membrane
E0006878biological_processintracellular copper ion homeostasis
E0006979biological_processresponse to oxidative stress
E0007611biological_processlearning or memory
E0007616biological_processlong-term memory
E0008017molecular_functionmicrotubule binding
E0009897cellular_componentexternal side of plasma membrane
E0009986cellular_componentcell surface
E0010955biological_processnegative regulation of protein processing
E0014069cellular_componentpostsynaptic density
E0015631molecular_functiontubulin binding
E0016020cellular_componentmembrane
E0016234cellular_componentinclusion body
E0019828molecular_functionaspartic-type endopeptidase inhibitor activity
E0019898cellular_componentextrinsic component of membrane
E0030425cellular_componentdendrite
E0031648biological_processprotein destabilization
E0031802molecular_functiontype 5 metabotropic glutamate receptor binding
E0031805molecular_functiontype 8 metabotropic glutamate receptor binding
E0032689biological_processnegative regulation of type II interferon production
E0032700biological_processnegative regulation of interleukin-17 production
E0032703biological_processnegative regulation of interleukin-2 production
E0035556biological_processintracellular signal transduction
E0038023molecular_functionsignaling receptor activity
E0042802molecular_functionidentical protein binding
E0043008molecular_functionATP-dependent protein binding
E0043066biological_processnegative regulation of apoptotic process
E0043195cellular_componentterminal bouton
E0043525biological_processpositive regulation of neuron apoptotic process
E0044325molecular_functiontransmembrane transporter binding
E0044877molecular_functionprotein-containing complex binding
E0045121cellular_componentmembrane raft
E0046007biological_processnegative regulation of activated T cell proliferation
E0046686biological_processresponse to cadmium ion
E0046688biological_processresponse to copper ion
E0046872molecular_functionmetal ion binding
E0050850biological_processpositive regulation of calcium-mediated signaling
E0050860biological_processnegative regulation of T cell receptor signaling pathway
E0051087molecular_functionprotein-folding chaperone binding
E0051260biological_processprotein homooligomerization
E0051726biological_processregulation of cell cycle
E0060090molecular_functionmolecular adaptor activity
E0070062cellular_componentextracellular exosome
E0070885biological_processnegative regulation of calcineurin-NFAT signaling cascade
E0071280biological_processcellular response to copper ion
E0090314biological_processpositive regulation of protein targeting to membrane
E0097062biological_processdendritic spine maintenance
E0098552cellular_componentside of membrane
E0098794cellular_componentpostsynapse
E0140677molecular_functionmolecular function activator activity
E0140693molecular_functionmolecular condensate scaffold activity
E1900272biological_processnegative regulation of long-term synaptic potentiation
E1900449biological_processregulation of glutamate receptor signaling pathway
E1900451biological_processpositive regulation of glutamate receptor signaling pathway
E1902430biological_processnegative regulation of amyloid-beta formation
E1902951biological_processnegative regulation of dendritic spine maintenance
E1902992biological_processnegative regulation of amyloid precursor protein catabolic process
E1903078biological_processpositive regulation of protein localization to plasma membrane
E1903135molecular_functioncupric ion binding
E1903136molecular_functioncuprous ion binding
E1904645biological_processresponse to amyloid-beta
E1904646biological_processcellular response to amyloid-beta
E1905664biological_processregulation of calcium ion import across plasma membrane
E1990535biological_processneuron projection maintenance
F0000122biological_processnegative regulation of transcription by RNA polymerase II
F0001540molecular_functionamyloid-beta binding
F0002020molecular_functionprotease binding
F0005507molecular_functioncopper ion binding
F0005515molecular_functionprotein binding
F0005521molecular_functionlamin binding
F0005539molecular_functionglycosaminoglycan binding
F0005737cellular_componentcytoplasm
F0005783cellular_componentendoplasmic reticulum
F0005794cellular_componentGolgi apparatus
F0005829cellular_componentcytosol
F0005886cellular_componentplasma membrane
F0006878biological_processintracellular copper ion homeostasis
F0006979biological_processresponse to oxidative stress
F0007611biological_processlearning or memory
F0007616biological_processlong-term memory
F0008017molecular_functionmicrotubule binding
F0009897cellular_componentexternal side of plasma membrane
F0009986cellular_componentcell surface
F0010955biological_processnegative regulation of protein processing
F0014069cellular_componentpostsynaptic density
F0015631molecular_functiontubulin binding
F0016020cellular_componentmembrane
F0016234cellular_componentinclusion body
F0019828molecular_functionaspartic-type endopeptidase inhibitor activity
F0019898cellular_componentextrinsic component of membrane
F0030425cellular_componentdendrite
F0031648biological_processprotein destabilization
F0031802molecular_functiontype 5 metabotropic glutamate receptor binding
F0031805molecular_functiontype 8 metabotropic glutamate receptor binding
F0032689biological_processnegative regulation of type II interferon production
F0032700biological_processnegative regulation of interleukin-17 production
F0032703biological_processnegative regulation of interleukin-2 production
F0035556biological_processintracellular signal transduction
F0038023molecular_functionsignaling receptor activity
F0042802molecular_functionidentical protein binding
F0043008molecular_functionATP-dependent protein binding
F0043066biological_processnegative regulation of apoptotic process
F0043195cellular_componentterminal bouton
F0043525biological_processpositive regulation of neuron apoptotic process
F0044325molecular_functiontransmembrane transporter binding
F0044877molecular_functionprotein-containing complex binding
F0045121cellular_componentmembrane raft
F0046007biological_processnegative regulation of activated T cell proliferation
F0046686biological_processresponse to cadmium ion
F0046688biological_processresponse to copper ion
F0046872molecular_functionmetal ion binding
F0050850biological_processpositive regulation of calcium-mediated signaling
F0050860biological_processnegative regulation of T cell receptor signaling pathway
F0051087molecular_functionprotein-folding chaperone binding
F0051260biological_processprotein homooligomerization
F0051726biological_processregulation of cell cycle
F0060090molecular_functionmolecular adaptor activity
F0070062cellular_componentextracellular exosome
F0070885biological_processnegative regulation of calcineurin-NFAT signaling cascade
F0071280biological_processcellular response to copper ion
F0090314biological_processpositive regulation of protein targeting to membrane
F0097062biological_processdendritic spine maintenance
F0098552cellular_componentside of membrane
F0098794cellular_componentpostsynapse
F0140677molecular_functionmolecular function activator activity
F0140693molecular_functionmolecular condensate scaffold activity
F1900272biological_processnegative regulation of long-term synaptic potentiation
F1900449biological_processregulation of glutamate receptor signaling pathway
F1900451biological_processpositive regulation of glutamate receptor signaling pathway
F1902430biological_processnegative regulation of amyloid-beta formation
F1902951biological_processnegative regulation of dendritic spine maintenance
F1902992biological_processnegative regulation of amyloid precursor protein catabolic process
F1903078biological_processpositive regulation of protein localization to plasma membrane
F1903135molecular_functioncupric ion binding
F1903136molecular_functioncuprous ion binding
F1904645biological_processresponse to amyloid-beta
F1904646biological_processcellular response to amyloid-beta
F1905664biological_processregulation of calcium ion import across plasma membrane
F1990535biological_processneuron projection maintenance
Functional Information from PROSITE/UniProt
site_idPS00291
Number of Residues16
DetailsPRION_1 Prion protein signature 1. AGAAAAGAVVGGLGGY
ChainResidueDetails
AALA113-TYR128

site_idPS00706
Number of Residues19
DetailsPRION_2 Prion protein signature 2. EtDvKMMeRVVeQMCitQY
ChainResidueDetails
AGLU200-TYR218

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"12214108","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"19349973","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

248335

PDB entries from 2026-01-28

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