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7DHG

Crystal structure of SARS-CoV-2 Orf9b complex with human TOM70

Functional Information from GO Data
ChainGOidnamespacecontents
B0005515molecular_functionprotein binding
B0005741cellular_componentmitochondrial outer membrane
B0019049biological_processvirus-mediated perturbation of host defense response
B0030430cellular_componenthost cell cytoplasm
B0031966cellular_componentmitochondrial membrane
B0033650cellular_componenthost cell mitochondrion
B0039502biological_processsymbiont-mediated suppression of host type I interferon-mediated signaling pathway
B0039545biological_processsymbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity
B0042802molecular_functionidentical protein binding
B0050687biological_processnegative regulation of defense response to virus
B0090258biological_processnegative regulation of mitochondrial fission
B0098799cellular_componentouter mitochondrial membrane protein complex
B0140311molecular_functionprotein sequestering activity
B2000786biological_processpositive regulation of autophagosome assembly
C0002218biological_processactivation of innate immune response
C0002230biological_processpositive regulation of defense response to virus by host
C0005515molecular_functionprotein binding
C0005739cellular_componentmitochondrion
C0005741cellular_componentmitochondrial outer membrane
C0005742cellular_componentmitochondrial outer membrane translocase complex
C0006626biological_processprotein targeting to mitochondrion
C0008320molecular_functionprotein transmembrane transporter activity
C0016020cellular_componentmembrane
C0030150biological_processprotein import into mitochondrial matrix
C0030943molecular_functionmitochondrion targeting sequence binding
C0031966cellular_componentmitochondrial membrane
C0032728biological_processpositive regulation of interferon-beta production
C0042981biological_processregulation of apoptotic process
C0045039biological_processprotein insertion into mitochondrial inner membrane
C0045040biological_processprotein insertion into mitochondrial outer membrane
C0060090molecular_functionmolecular adaptor activity
C0061052biological_processnegative regulation of cell growth involved in cardiac muscle cell development
C0070062cellular_componentextracellular exosome
C0097068biological_processresponse to thyroxine
C0098586biological_processcellular response to virus
C0140596cellular_componentTOM complex
C1903955biological_processpositive regulation of protein targeting to mitochondrion
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues36
DetailsTOPO_DOM: Mitochondrial intermembrane => ECO:0000255
ChainResidueDetails
CALA2-ARG38

site_idSWS_FT_FI2
Number of Residues20
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
CTRP39-TRP59

site_idSWS_FT_FI3
Number of Residues548
DetailsTOPO_DOM: Cytoplasmic => ECO:0000255
ChainResidueDetails
CSER60-LEU608

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N-acetylalanine => ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22223895, ECO:0007744|PubMed:22814378, ECO:0007744|PubMed:25944712
ChainResidueDetails
CALA2

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Omega-N-methylarginine => ECO:0007744|PubMed:24129315
ChainResidueDetails
CARG71

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18088087, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569
ChainResidueDetails
CSER91

site_idSWS_FT_FI7
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:24275569
ChainResidueDetails
CSER96

site_idSWS_FT_FI8
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
CSER110
CSER434

site_idSWS_FT_FI9
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
CLYS185

site_idSWS_FT_FI10
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
CLYS275

222036

PDB entries from 2024-07-03

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