7DH0
Activity optimized complex I (open form)
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| 1 | 0003954 | molecular_function | NADH dehydrogenase activity |
| 1 | 0005743 | cellular_component | mitochondrial inner membrane |
| 1 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 1 | 0009060 | biological_process | aerobic respiration |
| 1 | 0016020 | cellular_component | membrane |
| 1 | 0022904 | biological_process | respiratory electron transport chain |
| 1 | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| 1 | 0045271 | cellular_component | respiratory chain complex I |
| 1 | 1902600 | biological_process | proton transmembrane transport |
| 2 | 0005743 | cellular_component | mitochondrial inner membrane |
| 2 | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| 2 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 2 | 0022904 | biological_process | respiratory electron transport chain |
| 2 | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| 2 | 0045271 | cellular_component | respiratory chain complex I |
| 2 | 1902600 | biological_process | proton transmembrane transport |
| 3 | 0005743 | cellular_component | mitochondrial inner membrane |
| 3 | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| 3 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 3 | 0022904 | biological_process | respiratory electron transport chain |
| 3 | 0045271 | cellular_component | respiratory chain complex I |
| 3 | 1902600 | biological_process | proton transmembrane transport |
| 4 | 0003954 | molecular_function | NADH dehydrogenase activity |
| 4 | 0005743 | cellular_component | mitochondrial inner membrane |
| 4 | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| 4 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 4 | 0009060 | biological_process | aerobic respiration |
| 4 | 0015990 | biological_process | electron transport coupled proton transport |
| 4 | 0022904 | biological_process | respiratory electron transport chain |
| 4 | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| 4 | 0042773 | biological_process | ATP synthesis coupled electron transport |
| 4 | 0045271 | cellular_component | respiratory chain complex I |
| 4 | 0048039 | molecular_function | ubiquinone binding |
| 5 | 0005743 | cellular_component | mitochondrial inner membrane |
| 5 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 5 | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| 5 | 0022904 | biological_process | respiratory electron transport chain |
| 5 | 0042773 | biological_process | ATP synthesis coupled electron transport |
| 5 | 0045271 | cellular_component | respiratory chain complex I |
| 5 | 1902600 | biological_process | proton transmembrane transport |
| 6 | 0005743 | cellular_component | mitochondrial inner membrane |
| 6 | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| 6 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 6 | 0015990 | biological_process | electron transport coupled proton transport |
| 6 | 0022904 | biological_process | respiratory electron transport chain |
| 6 | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| 6 | 0042773 | biological_process | ATP synthesis coupled electron transport |
| 6 | 0045271 | cellular_component | respiratory chain complex I |
| 7 | 0005739 | cellular_component | mitochondrion |
| 7 | 0005743 | cellular_component | mitochondrial inner membrane |
| 7 | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| 7 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 7 | 0022904 | biological_process | respiratory electron transport chain |
| 7 | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| 7 | 0045271 | cellular_component | respiratory chain complex I |
| 7 | 1902600 | biological_process | proton transmembrane transport |
| 8 | 0005743 | cellular_component | mitochondrial inner membrane |
| 8 | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| 8 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 8 | 0010181 | molecular_function | FMN binding |
| 8 | 0016491 | molecular_function | oxidoreductase activity |
| 8 | 0022904 | biological_process | respiratory electron transport chain |
| 8 | 0045271 | cellular_component | respiratory chain complex I |
| 8 | 0046872 | molecular_function | metal ion binding |
| 8 | 0051287 | molecular_function | NAD binding |
| 8 | 0051536 | molecular_function | iron-sulfur cluster binding |
| 8 | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| 8 | 1902600 | biological_process | proton transmembrane transport |
| 9 | 0016491 | molecular_function | oxidoreductase activity |
| a | 0005739 | cellular_component | mitochondrion |
| a | 0005743 | cellular_component | mitochondrial inner membrane |
| a | 0022904 | biological_process | respiratory electron transport chain |
| a | 0045271 | cellular_component | respiratory chain complex I |
| A | 0005739 | cellular_component | mitochondrion |
| A | 0005743 | cellular_component | mitochondrial inner membrane |
| A | 0005758 | cellular_component | mitochondrial intermembrane space |
| A | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| A | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| A | 0009055 | molecular_function | electron transfer activity |
| A | 0016020 | cellular_component | membrane |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| A | 0022904 | biological_process | respiratory electron transport chain |
| A | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| A | 0042773 | biological_process | ATP synthesis coupled electron transport |
| A | 0045271 | cellular_component | respiratory chain complex I |
| A | 0045333 | biological_process | cellular respiration |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051536 | molecular_function | iron-sulfur cluster binding |
| A | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
| A | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| A | 1902600 | biological_process | proton transmembrane transport |
| B | 0003954 | molecular_function | NADH dehydrogenase activity |
| B | 0005739 | cellular_component | mitochondrion |
| B | 0005743 | cellular_component | mitochondrial inner membrane |
| B | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| B | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| B | 0019826 | molecular_function | oxygen sensor activity |
| B | 0022008 | biological_process | neurogenesis |
| B | 0022904 | biological_process | respiratory electron transport chain |
| B | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| B | 0042063 | biological_process | gliogenesis |
| B | 0045271 | cellular_component | respiratory chain complex I |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0048038 | molecular_function | quinone binding |
| B | 0051287 | molecular_function | NAD binding |
| B | 0051536 | molecular_function | iron-sulfur cluster binding |
| B | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| B | 0061351 | biological_process | neural precursor cell proliferation |
| B | 0071453 | biological_process | cellular response to oxygen levels |
| B | 1902600 | biological_process | proton transmembrane transport |
| c | 0005739 | cellular_component | mitochondrion |
| c | 0005743 | cellular_component | mitochondrial inner membrane |
| c | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| c | 0022904 | biological_process | respiratory electron transport chain |
| c | 0042775 | biological_process | mitochondrial ATP synthesis coupled electron transport |
| c | 0045271 | cellular_component | respiratory chain complex I |
| C | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| C | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| d | 0005739 | cellular_component | mitochondrion |
| d | 0005743 | cellular_component | mitochondrial inner membrane |
| d | 0005758 | cellular_component | mitochondrial intermembrane space |
| d | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| d | 0022904 | biological_process | respiratory electron transport chain |
| d | 0045271 | cellular_component | respiratory chain complex I |
| d | 1902600 | biological_process | proton transmembrane transport |
| D | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| D | 0048038 | molecular_function | quinone binding |
| D | 0051536 | molecular_function | iron-sulfur cluster binding |
| D | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| e | 0005739 | cellular_component | mitochondrion |
| e | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| E | 0016020 | cellular_component | membrane |
| E | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| E | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| f | 0005739 | cellular_component | mitochondrion |
| f | 0005743 | cellular_component | mitochondrial inner membrane |
| f | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| f | 0022904 | biological_process | respiratory electron transport chain |
| f | 0045271 | cellular_component | respiratory chain complex I |
| F | 0005739 | cellular_component | mitochondrion |
| F | 0045271 | cellular_component | respiratory chain complex I |
| g | 0005739 | cellular_component | mitochondrion |
| g | 0005743 | cellular_component | mitochondrial inner membrane |
| g | 0022904 | biological_process | respiratory electron transport chain |
| g | 0045271 | cellular_component | respiratory chain complex I |
| G | 0022900 | biological_process | electron transport chain |
| H | 0005739 | cellular_component | mitochondrion |
| H | 0005743 | cellular_component | mitochondrial inner membrane |
| H | 0005758 | cellular_component | mitochondrial intermembrane space |
| H | 0022904 | biological_process | respiratory electron transport chain |
| H | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| H | 0045271 | cellular_component | respiratory chain complex I |
| i | 0005739 | cellular_component | mitochondrion |
| i | 0045271 | cellular_component | respiratory chain complex I |
| I | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| j | 0005737 | cellular_component | cytoplasm |
| j | 0005739 | cellular_component | mitochondrion |
| j | 0005743 | cellular_component | mitochondrial inner membrane |
| j | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| j | 0022904 | biological_process | respiratory electron transport chain |
| j | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| j | 0045271 | cellular_component | respiratory chain complex I |
| J | 0005739 | cellular_component | mitochondrion |
| J | 0005743 | cellular_component | mitochondrial inner membrane |
| J | 0022904 | biological_process | respiratory electron transport chain |
| J | 0045271 | cellular_component | respiratory chain complex I |
| K | 0005739 | cellular_component | mitochondrion |
| K | 0005743 | cellular_component | mitochondrial inner membrane |
| K | 0022904 | biological_process | respiratory electron transport chain |
| K | 0031966 | cellular_component | mitochondrial membrane |
| K | 0045271 | cellular_component | respiratory chain complex I |
| L | 0005739 | cellular_component | mitochondrion |
| L | 0005743 | cellular_component | mitochondrial inner membrane |
| L | 0022904 | biological_process | respiratory electron transport chain |
| L | 0045271 | cellular_component | respiratory chain complex I |
| M | 0006633 | biological_process | fatty acid biosynthetic process |
| N | 0005739 | cellular_component | mitochondrion |
| N | 0005743 | cellular_component | mitochondrial inner membrane |
| N | 0022904 | biological_process | respiratory electron transport chain |
| N | 0045271 | cellular_component | respiratory chain complex I |
| O | 0005739 | cellular_component | mitochondrion |
| O | 0005743 | cellular_component | mitochondrial inner membrane |
| O | 0022904 | biological_process | respiratory electron transport chain |
| O | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| O | 0045271 | cellular_component | respiratory chain complex I |
| P | 0005739 | cellular_component | mitochondrion |
| P | 0005743 | cellular_component | mitochondrial inner membrane |
| P | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| P | 0016491 | molecular_function | oxidoreductase activity |
| P | 0022904 | biological_process | respiratory electron transport chain |
| P | 0042773 | biological_process | ATP synthesis coupled electron transport |
| P | 0045271 | cellular_component | respiratory chain complex I |
| Q | 0005739 | cellular_component | mitochondrion |
| Q | 0005743 | cellular_component | mitochondrial inner membrane |
| Q | 0005758 | cellular_component | mitochondrial intermembrane space |
| Q | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| Q | 0022904 | biological_process | respiratory electron transport chain |
| Q | 0045271 | cellular_component | respiratory chain complex I |
| R | 0003954 | molecular_function | NADH dehydrogenase activity |
| R | 0005739 | cellular_component | mitochondrion |
| R | 0005743 | cellular_component | mitochondrial inner membrane |
| R | 0005759 | cellular_component | mitochondrial matrix |
| R | 0006744 | biological_process | ubiquinone biosynthetic process |
| R | 0007623 | biological_process | circadian rhythm |
| R | 0022904 | biological_process | respiratory electron transport chain |
| R | 0031966 | cellular_component | mitochondrial membrane |
| R | 0044877 | molecular_function | protein-containing complex binding |
| R | 0045271 | cellular_component | respiratory chain complex I |
| S | 0005737 | cellular_component | cytoplasm |
| S | 0005739 | cellular_component | mitochondrion |
| S | 0005759 | cellular_component | mitochondrial matrix |
| S | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| S | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| S | 0022904 | biological_process | respiratory electron transport chain |
| S | 0045271 | cellular_component | respiratory chain complex I |
| S | 1902600 | biological_process | proton transmembrane transport |
| T | 0005739 | cellular_component | mitochondrion |
| T | 0005743 | cellular_component | mitochondrial inner membrane |
| T | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| T | 0022904 | biological_process | respiratory electron transport chain |
| T | 0045271 | cellular_component | respiratory chain complex I |
| U | 0005739 | cellular_component | mitochondrion |
| U | 0005743 | cellular_component | mitochondrial inner membrane |
| U | 0016020 | cellular_component | membrane |
| U | 0022904 | biological_process | respiratory electron transport chain |
| U | 0045271 | cellular_component | respiratory chain complex I |
| V | 0005634 | cellular_component | nucleus |
| V | 0005654 | cellular_component | nucleoplasm |
| V | 0005737 | cellular_component | cytoplasm |
| V | 0005739 | cellular_component | mitochondrion |
| V | 0005743 | cellular_component | mitochondrial inner membrane |
| V | 0006915 | biological_process | apoptotic process |
| V | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| V | 0022904 | biological_process | respiratory electron transport chain |
| V | 0045271 | cellular_component | respiratory chain complex I |
| V | 0045892 | biological_process | negative regulation of DNA-templated transcription |
| V | 1902600 | biological_process | proton transmembrane transport |
| W | 0006633 | biological_process | fatty acid biosynthetic process |
| X | 0005739 | cellular_component | mitochondrion |
| X | 0005743 | cellular_component | mitochondrial inner membrane |
| X | 0022904 | biological_process | respiratory electron transport chain |
| X | 0045271 | cellular_component | respiratory chain complex I |
| Y | 0005743 | cellular_component | mitochondrial inner membrane |
| Y | 0045271 | cellular_component | respiratory chain complex I |
| Z | 0005739 | cellular_component | mitochondrion |
| Z | 0005743 | cellular_component | mitochondrial inner membrane |
| Z | 0022900 | biological_process | electron transport chain |
| Z | 0022904 | biological_process | respiratory electron transport chain |
| Z | 0045271 | cellular_component | respiratory chain complex I |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue 3PE 2 401 |
| Chain | Residue |
| 2 | PRO238 |
| 2 | ILE239 |
| 4 | TRP16 |
| 4 | THR90 |
| site_id | AC2 |
| Number of Residues | 10 |
| Details | binding site for residue CDL 4 501 |
| Chain | Residue |
| 6 | TRP66 |
| b | GLY79 |
| b | ALA83 |
| b | ILE84 |
| h | ALA107 |
| 4 | LEU446 |
| 4 | LEU449 |
| 4 | ASN450 |
| 6 | MET20 |
| 6 | SER23 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue 3PE 4 502 |
| Chain | Residue |
| 2 | ILE276 |
| 4 | TYR166 |
| 4 | SER191 |
| 4 | PHE194 |
| T | TRP133 |
| site_id | AC4 |
| Number of Residues | 10 |
| Details | binding site for residue FMN 8 501 |
| Chain | Residue |
| 8 | GLY89 |
| 8 | LYS98 |
| 8 | ASN116 |
| 8 | ASP118 |
| 8 | GLU119 |
| 8 | GLY120 |
| 8 | CYS206 |
| 8 | GLY207 |
| 8 | ALA243 |
| 8 | ASN244 |
| site_id | AC5 |
| Number of Residues | 9 |
| Details | binding site for residue SF4 8 502 |
| Chain | Residue |
| 8 | TYR204 |
| 8 | CYS379 |
| 8 | GLY380 |
| 8 | GLN381 |
| 8 | CYS382 |
| 8 | CYS385 |
| 8 | THR423 |
| 8 | ILE424 |
| 8 | CYS425 |
| site_id | AC6 |
| Number of Residues | 8 |
| Details | binding site for residue FES 9 301 |
| Chain | Residue |
| 9 | CYS135 |
| 9 | THR137 |
| 9 | CYS140 |
| 9 | CYS176 |
| 9 | LEU177 |
| 9 | GLY178 |
| 9 | ALA179 |
| 9 | CYS180 |
| site_id | AC7 |
| Number of Residues | 9 |
| Details | binding site for residue SF4 A 801 |
| Chain | Residue |
| A | HIS124 |
| A | ASP127 |
| A | CYS128 |
| A | CYS131 |
| A | CYS137 |
| A | LEU139 |
| A | GLN140 |
| A | ARG175 |
| A | GLY229 |
| site_id | AC8 |
| Number of Residues | 9 |
| Details | binding site for residue SF4 A 802 |
| Chain | Residue |
| A | CYS176 |
| A | GLN178 |
| A | CYS179 |
| A | ARG181 |
| A | CYS182 |
| A | VAL206 |
| A | CYS226 |
| A | PRO227 |
| A | LEU231 |
| site_id | AC9 |
| Number of Residues | 7 |
| Details | binding site for residue FES A 803 |
| Chain | Residue |
| A | CYS64 |
| A | GLY73 |
| A | CYS75 |
| A | ARG76 |
| A | MET77 |
| A | CYS78 |
| A | CYS92 |
| site_id | AD1 |
| Number of Residues | 11 |
| Details | binding site for residue 3PE B 501 |
| Chain | Residue |
| 1 | PRO180 |
| 1 | ALA182 |
| 1 | MET183 |
| 1 | MET184 |
| 1 | PHE186 |
| 1 | TYR277 |
| 1 | PHE293 |
| B | ARG266 |
| E | THR60 |
| E | LEU61 |
| E | TRP63 |
| site_id | AD2 |
| Number of Residues | 7 |
| Details | binding site for residue SF4 D 301 |
| Chain | Residue |
| B | ARG138 |
| D | ALA90 |
| D | CYS91 |
| D | CYS92 |
| D | CYS156 |
| D | CYS186 |
| D | PRO187 |
| site_id | AD3 |
| Number of Residues | 11 |
| Details | binding site for residue SF4 E 301 |
| Chain | Residue |
| E | GLU169 |
| E | HIS101 |
| E | CYS123 |
| E | PRO124 |
| E | CYS152 |
| E | ILE153 |
| E | TYR154 |
| E | CYS155 |
| E | GLY156 |
| E | PHE157 |
| E | CYS158 |
| site_id | AD4 |
| Number of Residues | 11 |
| Details | binding site for residue SF4 E 302 |
| Chain | Residue |
| E | CYS113 |
| E | ILE114 |
| E | ALA115 |
| E | CYS116 |
| E | LYS117 |
| E | LEU118 |
| E | CYS119 |
| E | ILE130 |
| E | CYS162 |
| E | ALA166 |
| E | ILE167 |
| site_id | AD5 |
| Number of Residues | 3 |
| Details | binding site for residue ZN I 300 |
| Chain | Residue |
| I | CYS87 |
| I | HIS96 |
| I | CYS115 |
| site_id | AD6 |
| Number of Residues | 15 |
| Details | binding site for residue NAP R 601 |
| Chain | Residue |
| D | ARG215 |
| R | THR62 |
| R | GLY63 |
| R | PHE64 |
| R | LEU65 |
| R | ARG85 |
| R | GLU87 |
| R | LEU129 |
| R | VAL130 |
| R | GLY131 |
| R | ARG132 |
| R | ILE167 |
| R | TYR180 |
| R | ALA204 |
| R | ILE206 |
| site_id | AD7 |
| Number of Residues | 1 |
| Details | binding site for residue PC1 S 401 |
| Chain | Residue |
| S | MET284 |
| site_id | AD8 |
| Number of Residues | 3 |
| Details | binding site for residue PC1 j 201 |
| Chain | Residue |
| H | PHE4 |
| j | PHE11 |
| j | GLN12 |
Functional Information from PROSITE/UniProt
| site_id | PS00012 |
| Number of Residues | 16 |
| Details | PHOSPHOPANTETHEINE Phosphopantetheine attachment site. DLGLDSLDQVEIIMAM |
| Chain | Residue | Details |
| W | ASP107-MET122 |
| site_id | PS00018 |
| Number of Residues | 13 |
| Details | EF_HAND_1 EF-hand calcium-binding domain. DIDAEKLMCpqEI |
| Chain | Residue | Details |
| W | ASP132-ILE144 |
| site_id | PS00198 |
| Number of Residues | 12 |
| Details | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiACKlCEaVCP |
| Chain | Residue | Details |
| E | CYS113-PRO124 | |
| E | CYS152-PRO163 |
| site_id | PS00535 |
| Number of Residues | 12 |
| Details | COMPLEX1_49K Respiratory chain NADH dehydrogenase 49 Kd subunit signature. LHRGtEKLiEyK |
| Chain | Residue | Details |
| B | LEU116-LYS127 |
| site_id | PS00542 |
| Number of Residues | 22 |
| Details | COMPLEX1_30K Respiratory chain NADH dehydrogenase 30 Kd subunit signature. EREiwDMFgvffanHpdlRrIL |
| Chain | Residue | Details |
| C | GLU169-LEU190 |
| site_id | PS00641 |
| Number of Residues | 18 |
| Details | COMPLEX1_75K_1 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. PrfCYherlsvaGnCRmC |
| Chain | Residue | Details |
| A | PRO61-CYS78 |
| site_id | PS00642 |
| Number of Residues | 13 |
| Details | COMPLEX1_75K_2 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. CPiCDqGGeCdLQ |
| Chain | Residue | Details |
| A | CYS128-GLN140 |
| site_id | PS00643 |
| Number of Residues | 11 |
| Details | COMPLEX1_75K_3 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. RCIqCtRCIrF |
| Chain | Residue | Details |
| A | ARG175-PHE185 |
| site_id | PS00644 |
| Number of Residues | 16 |
| Details | COMPLEX1_51K_1 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. GAGAYICGEETALIES |
| Chain | Residue | Details |
| 8 | GLY200-SER215 |
| site_id | PS00645 |
| Number of Residues | 12 |
| Details | COMPLEX1_51K_2 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. ESCGqCtPCReG |
| Chain | Residue | Details |
| 8 | GLU377-GLY388 |
| site_id | PS00667 |
| Number of Residues | 16 |
| Details | COMPLEX1_ND1_1 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. GLLQpIaDAIKLFiKE |
| Chain | Residue | Details |
| 1 | GLY44-GLU59 |
| site_id | PS00668 |
| Number of Residues | 14 |
| Details | COMPLEX1_ND1_2 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. PFDLTEGEseLVs.G |
| Chain | Residue | Details |
| 1 | PRO197-GLY210 |
| site_id | PS01099 |
| Number of Residues | 19 |
| Details | COMPLEX1_24K Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. DklFTlieveCLGaCvnAP |
| Chain | Residue | Details |
| 9 | ASP166-PRO184 |
| site_id | PS01150 |
| Number of Residues | 17 |
| Details | COMPLEX1_20K Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. GcDRIVPVDIYvPgCPP |
| Chain | Residue | Details |
| D | GLY172-PRO188 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1401 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 3 |
| Details | Modified residue: {"description":"N-formylmethionine","evidences":[{"source":"PubMed","id":"17060615","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 57 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"27509854","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5LC5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5LDW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5LDX","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q91YT0","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q91YT0","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"Q91YT0","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q9D6J6","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphotyrosine; by SRC","evidences":[{"source":"UniProtKB","id":"P19404","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 78 |
| Details | Domain: {"description":"2Fe-2S ferredoxin-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00465","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 39 |
| Details | Domain: {"description":"4Fe-4S His(Cys)3-ligated-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU01184","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 56 |
| Details | Domain: {"description":"4Fe-4S Mo/W bis-MGD-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU01004","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"Q56223","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01184","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 3 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q91VD9","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 7 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Symmetric dimethylarginine","evidences":[{"source":"PubMed","id":"23836892","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Hydroxyarginine","evidences":[{"source":"PubMed","id":"23836892","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 29 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 29 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI21 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI22 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P56181","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI23 |
| Number of Residues | 121 |
| Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI24 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"20433953","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI25 |
| Number of Residues | 86 |
| Details | Domain: {"description":"CHCH","evidences":[{"source":"PROSITE-ProRule","id":"PRU01150","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI26 |
| Number of Residues | 30 |
| Details | Motif: {"description":"Cx9C motif 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01150","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI27 |
| Number of Residues | 30 |
| Details | Motif: {"description":"Cx9C motif 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU01150","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI28 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q9CQ75","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI29 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q9CQ75","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI30 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q16718","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI31 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q9CPP6","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI32 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q63362","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI33 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q9CPP6","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI34 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q9Z1P6","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI35 |
| Number of Residues | 41 |
| Details | Domain: {"description":"CHCH 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01150","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI36 |
| Number of Residues | 43 |
| Details | Domain: {"description":"CHCH 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU01150","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI37 |
| Number of Residues | 10 |
| Details | Motif: {"description":"Cx9C motif 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU01150","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI38 |
| Number of Residues | 10 |
| Details | Motif: {"description":"Cx9C motif 4","evidences":[{"source":"PROSITE-ProRule","id":"PRU01150","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI39 |
| Number of Residues | 24 |
| Details | Compositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI40 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q9DC69","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI41 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q9DC69","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI42 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q99LC3","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI43 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine; by PINK1","evidences":[{"source":"UniProtKB","id":"Q99LC3","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI44 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylalanine","evidences":[{"source":"PubMed","id":"12381726","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17060615","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI45 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylmethionine","evidences":[{"source":"PubMed","id":"9827566","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI46 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q9CR21","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI47 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"O-(pantetheine 4'-phosphoryl)serine","evidences":[{"source":"PROSITE-ProRule","id":"PRU00258","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"1907568","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI48 |
| Number of Residues | 75 |
| Details | Domain: {"description":"Carrier","evidences":[{"source":"PROSITE-ProRule","id":"PRU00258","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI49 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q9CQZ6","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI50 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"O95168","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI51 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q3UIU2","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI52 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q9CR61","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI53 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q9Y6M9","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI54 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-formylmethionine","evidences":[{"source":"PubMed","id":"17060615","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"3141400","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI55 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"O96000","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |






