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7DBK

Crystal structure of human LDHB in complex with NADH

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004457molecular_functionlactate dehydrogenase activity
A0004459molecular_functionL-lactate dehydrogenase (NAD+) activity
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005743cellular_componentmitochondrial inner membrane
A0005829cellular_componentcytosol
A0006089biological_processlactate metabolic process
A0016020cellular_componentmembrane
A0016491molecular_functionoxidoreductase activity
A0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
A0019674biological_processNAD+ metabolic process
A0019752biological_processcarboxylic acid metabolic process
A0019900molecular_functionkinase binding
A0042802molecular_functionidentical protein binding
A0042867biological_processpyruvate catabolic process
A0045121cellular_componentmembrane raft
A0051287molecular_functionNAD binding
A0070062cellular_componentextracellular exosome
A1990204cellular_componentoxidoreductase complex
B0003824molecular_functioncatalytic activity
B0004457molecular_functionlactate dehydrogenase activity
B0004459molecular_functionL-lactate dehydrogenase (NAD+) activity
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0005739cellular_componentmitochondrion
B0005743cellular_componentmitochondrial inner membrane
B0005829cellular_componentcytosol
B0006089biological_processlactate metabolic process
B0016020cellular_componentmembrane
B0016491molecular_functionoxidoreductase activity
B0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
B0019674biological_processNAD+ metabolic process
B0019752biological_processcarboxylic acid metabolic process
B0019900molecular_functionkinase binding
B0042802molecular_functionidentical protein binding
B0042867biological_processpyruvate catabolic process
B0045121cellular_componentmembrane raft
B0051287molecular_functionNAD binding
B0070062cellular_componentextracellular exosome
B1990204cellular_componentoxidoreductase complex
C0003824molecular_functioncatalytic activity
C0004457molecular_functionlactate dehydrogenase activity
C0004459molecular_functionL-lactate dehydrogenase (NAD+) activity
C0005515molecular_functionprotein binding
C0005737cellular_componentcytoplasm
C0005739cellular_componentmitochondrion
C0005743cellular_componentmitochondrial inner membrane
C0005829cellular_componentcytosol
C0006089biological_processlactate metabolic process
C0016020cellular_componentmembrane
C0016491molecular_functionoxidoreductase activity
C0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
C0019674biological_processNAD+ metabolic process
C0019752biological_processcarboxylic acid metabolic process
C0019900molecular_functionkinase binding
C0042802molecular_functionidentical protein binding
C0042867biological_processpyruvate catabolic process
C0045121cellular_componentmembrane raft
C0051287molecular_functionNAD binding
C0070062cellular_componentextracellular exosome
C1990204cellular_componentoxidoreductase complex
D0003824molecular_functioncatalytic activity
D0004457molecular_functionlactate dehydrogenase activity
D0004459molecular_functionL-lactate dehydrogenase (NAD+) activity
D0005515molecular_functionprotein binding
D0005737cellular_componentcytoplasm
D0005739cellular_componentmitochondrion
D0005743cellular_componentmitochondrial inner membrane
D0005829cellular_componentcytosol
D0006089biological_processlactate metabolic process
D0016020cellular_componentmembrane
D0016491molecular_functionoxidoreductase activity
D0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
D0019674biological_processNAD+ metabolic process
D0019752biological_processcarboxylic acid metabolic process
D0019900molecular_functionkinase binding
D0042802molecular_functionidentical protein binding
D0042867biological_processpyruvate catabolic process
D0045121cellular_componentmembrane raft
D0051287molecular_functionNAD binding
D0070062cellular_componentextracellular exosome
D1990204cellular_componentoxidoreductase complex
E0003824molecular_functioncatalytic activity
E0004457molecular_functionlactate dehydrogenase activity
E0004459molecular_functionL-lactate dehydrogenase (NAD+) activity
E0005515molecular_functionprotein binding
E0005737cellular_componentcytoplasm
E0005739cellular_componentmitochondrion
E0005743cellular_componentmitochondrial inner membrane
E0005829cellular_componentcytosol
E0006089biological_processlactate metabolic process
E0016020cellular_componentmembrane
E0016491molecular_functionoxidoreductase activity
E0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
E0019674biological_processNAD+ metabolic process
E0019752biological_processcarboxylic acid metabolic process
E0019900molecular_functionkinase binding
E0042802molecular_functionidentical protein binding
E0042867biological_processpyruvate catabolic process
E0045121cellular_componentmembrane raft
E0051287molecular_functionNAD binding
E0070062cellular_componentextracellular exosome
E1990204cellular_componentoxidoreductase complex
F0003824molecular_functioncatalytic activity
F0004457molecular_functionlactate dehydrogenase activity
F0004459molecular_functionL-lactate dehydrogenase (NAD+) activity
F0005515molecular_functionprotein binding
F0005737cellular_componentcytoplasm
F0005739cellular_componentmitochondrion
F0005743cellular_componentmitochondrial inner membrane
F0005829cellular_componentcytosol
F0006089biological_processlactate metabolic process
F0016020cellular_componentmembrane
F0016491molecular_functionoxidoreductase activity
F0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
F0019674biological_processNAD+ metabolic process
F0019752biological_processcarboxylic acid metabolic process
F0019900molecular_functionkinase binding
F0042802molecular_functionidentical protein binding
F0042867biological_processpyruvate catabolic process
F0045121cellular_componentmembrane raft
F0051287molecular_functionNAD binding
F0070062cellular_componentextracellular exosome
F1990204cellular_componentoxidoreductase complex
G0003824molecular_functioncatalytic activity
G0004457molecular_functionlactate dehydrogenase activity
G0004459molecular_functionL-lactate dehydrogenase (NAD+) activity
G0005515molecular_functionprotein binding
G0005737cellular_componentcytoplasm
G0005739cellular_componentmitochondrion
G0005743cellular_componentmitochondrial inner membrane
G0005829cellular_componentcytosol
G0006089biological_processlactate metabolic process
G0016020cellular_componentmembrane
G0016491molecular_functionoxidoreductase activity
G0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
G0019674biological_processNAD+ metabolic process
G0019752biological_processcarboxylic acid metabolic process
G0019900molecular_functionkinase binding
G0042802molecular_functionidentical protein binding
G0042867biological_processpyruvate catabolic process
G0045121cellular_componentmembrane raft
G0051287molecular_functionNAD binding
G0070062cellular_componentextracellular exosome
G1990204cellular_componentoxidoreductase complex
H0003824molecular_functioncatalytic activity
H0004457molecular_functionlactate dehydrogenase activity
H0004459molecular_functionL-lactate dehydrogenase (NAD+) activity
H0005515molecular_functionprotein binding
H0005737cellular_componentcytoplasm
H0005739cellular_componentmitochondrion
H0005743cellular_componentmitochondrial inner membrane
H0005829cellular_componentcytosol
H0006089biological_processlactate metabolic process
H0016020cellular_componentmembrane
H0016491molecular_functionoxidoreductase activity
H0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
H0019674biological_processNAD+ metabolic process
H0019752biological_processcarboxylic acid metabolic process
H0019900molecular_functionkinase binding
H0042802molecular_functionidentical protein binding
H0042867biological_processpyruvate catabolic process
H0045121cellular_componentmembrane raft
H0051287molecular_functionNAD binding
H0070062cellular_componentextracellular exosome
H1990204cellular_componentoxidoreductase complex
Functional Information from PROSITE/UniProt
site_idPS00064
Number of Residues7
DetailsL_LDH L-lactate dehydrogenase active site. LGEHGDS
ChainResidueDetails
ALEU191-SER197

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsActive site: {"description":"Proton acceptor"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues176
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"11276087","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues32
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues8
DetailsModified residue: {"description":"N-acetylalanine","evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"MAY-2005","submissionDatabase":"UniProtKB","authors":["Bienvenut W.V."]}}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues32
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues8
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues8
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

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