Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

7C90

Crystal structure of Cytochrome CL from the marine methylotrophic bacterium Methylophaga aminisulfidivorans MPT (Ma-CytcL)

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005506	molecular_function	iron ion binding
A	0009055	molecular_function	electron transfer activity
A	0020037	molecular_function	heme binding
A	0042597	cellular_component	periplasmic space
A	0046872	molecular_function	metal ion binding
B	0005506	molecular_function	iron ion binding
B	0009055	molecular_function	electron transfer activity
B	0020037	molecular_function	heme binding
B	0042597	cellular_component	periplasmic space
B	0046872	molecular_function	metal ion binding
C	0005506	molecular_function	iron ion binding
C	0009055	molecular_function	electron transfer activity
C	0020037	molecular_function	heme binding
C	0042597	cellular_component	periplasmic space
C	0046872	molecular_function	metal ion binding
D	0005506	molecular_function	iron ion binding
D	0009055	molecular_function	electron transfer activity
D	0020037	molecular_function	heme binding
D	0042597	cellular_component	periplasmic space
D	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	22
Details	binding site for residue HEC A 201

Chain	Residue
A	ALA87
A	TYR111
A	ASN114
A	LEU120
A	ILE124
A	ALA128
A	ARG129
A	MET131
A	MET132
A	HOH304
A	HOH321
A	CYS88
A	HOH325
B	LEU100
D	GLY90
A	CYS91
A	HIS92
A	GLY101
A	PRO102
A	LEU104
A	TYR109
A	THR110

site_id	AC2
Number of Residues	5
Details	binding site for residue EPE A 202

Chain	Residue
A	ASP46
A	PHE49
A	TYR136
A	HOH360
A	HOH364

site_id	AC3
Number of Residues	3
Details	binding site for residue GOL A 204

Chain	Residue
A	TYR108
B	THR39
B	HOH355

site_id	AC4
Number of Residues	2
Details	binding site for residue CA A 205

Chain	Residue
A	PRO112
A	LYS113

site_id	AC5
Number of Residues	1
Details	binding site for residue FE A 206

Chain	Residue
A	HIS94

site_id	AC6
Number of Residues	5
Details	binding site for residue NA A 207

Chain	Residue
A	ASP106
A	TYR108
A	TYR109
A	HOH310
A	HOH321

site_id	AC7
Number of Residues	6
Details	binding site for residue NA A 208

Chain	Residue
A	ALA103
A	ASP106
A	TYR108
A	HOH321
A	HOH365
B	HOH362

site_id	AC8
Number of Residues	13
Details	binding site for residue EPE B 202

Chain	Residue
B	ASP73
B	GLU75
B	HOH303
B	HOH324
D	GLY53
D	GLU54
D	LYS55
D	THR56
D	VAL59
D	THR140
D	LYS141
D	ASP142
D	HOH346

site_id	AC9
Number of Residues	5
Details	binding site for residue EPE B 203

Chain	Residue
B	VAL44
B	LEU45
B	ASP46
B	LEU47
B	SER48

site_id	AD1
Number of Residues	4
Details	binding site for residue GOL B 204

Chain	Residue
B	VAL44
B	LEU45
B	ASP46
B	HOH374

site_id	AD2
Number of Residues	2
Details	binding site for residue CA B 205

Chain	Residue
A	HOH395
B	LYS113

site_id	AD3
Number of Residues	2
Details	binding site for residue FE B 206

Chain	Residue
B	HIS94
B	HOH350

site_id	AD4
Number of Residues	6
Details	binding site for residue NA B 207

Chain	Residue
A	HOH335
B	ALA103
B	ASP106
B	TYR108
B	HOH316
B	HOH354

site_id	AD5
Number of Residues	4
Details	binding site for residue NA B 208

Chain	Residue
B	ASP106
B	TYR108
B	TYR109
B	HOH316

site_id	AD6
Number of Residues	9
Details	binding site for residue EPE C 202

Chain	Residue
C	GLU54
C	LYS55
C	THR56
C	VAL59
C	THR140
C	LYS141
C	ASP142
C	HOH337
D	GLU57

site_id	AD7
Number of Residues	3
Details	binding site for residue CA C 203

Chain	Residue
C	PRO112
C	LYS113
C	HOH350

site_id	AD8
Number of Residues	2
Details	binding site for residue FE C 204

Chain	Residue
C	HIS94
C	GLU97

site_id	AD9
Number of Residues	6
Details	binding site for residue NA C 205

Chain	Residue
C	HOH324
C	ASP106
C	TYR108
C	TYR109
C	NA206
C	HOH322

site_id	AE1
Number of Residues	7
Details	binding site for residue NA C 206

Chain	Residue
C	ALA103
C	ASP106
C	TYR108
C	NA205
C	HOH323
C	HOH324
C	HOH355

site_id	AE2
Number of Residues	1
Details	binding site for residue CA D 202

Chain	Residue
D	PRO112

site_id	AE3
Number of Residues	2
Details	binding site for residue FE D 203

Chain	Residue
D	HIS94
D	GLU97

site_id	AE4
Number of Residues	6
Details	binding site for residue NA D 204

Chain	Residue
C	HOH325
D	ALA103
D	ASP106
D	TYR108
D	HOH327
D	HOH362

site_id	AE5
Number of Residues	4
Details	binding site for residue NA D 205

Chain	Residue
D	ASP106
D	TYR108
D	TYR109
D	HOH327

site_id	AE6
Number of Residues	25
Details	binding site for Di-peptide HEC B 201 and CYS B 88

Chain	Residue
B	PHE84
B	ALA87
B	SER89
B	GLY90
B	CYS91
B	HIS92
B	GLY101
B	PRO102
B	LEU104
B	TYR109
B	THR110
B	TYR111
B	ASN114
B	LEU120
B	ILE124
B	ALA128
B	ARG129
B	SER130
B	MET131
B	MET132
B	LEU139
B	HOH316
B	HOH318
B	HOH362
C	GLY90

site_id	AE7
Number of Residues	27
Details	binding site for Di-peptide HEC B 201 and CYS B 91

Chain	Residue
B	ALA87
B	CYS88
B	SER89
B	GLY90
B	HIS92
B	GLY93
B	LYS99
B	LEU100
B	GLY101
B	PRO102
B	LEU104
B	TYR109
B	THR110
B	TYR111
B	ASN114
B	LEU120
B	ILE124
B	ALA128
B	ARG129
B	SER130
B	MET131
B	MET132
B	LEU139
B	HOH316
B	HOH318
B	HOH362
C	GLY90

site_id	AE8
Number of Residues	29
Details	binding site for Di-peptide HEC C 201 and CYS C 91

Chain	Residue
B	GLY90
C	ALA87
C	CYS88
C	SER89
C	GLY90
C	HIS92
C	GLY93
C	LYS99
C	LEU100
C	GLY101
C	PRO102
C	LEU104
C	TYR109
C	THR110
C	TYR111
C	ASN114
C	LEU120
C	THR123
C	ILE124
C	ALA128
C	ARG129
C	MET131
C	MET132
C	ILE147
C	HOH324
C	HOH332
C	HOH355
D	LEU100
D	HOH344

site_id	AE9
Number of Residues	28
Details	binding site for Di-peptide HEC C 201 and CYS C 88

Chain	Residue
B	GLY90
C	PHE84
C	THR86
C	ALA87
C	SER89
C	GLY90
C	CYS91
C	HIS92
C	GLY101
C	PRO102
C	LEU104
C	TYR109
C	THR110
C	TYR111
C	ASN114
C	LEU120
C	THR123
C	ILE124
C	ALA128
C	ARG129
C	MET131
C	MET132
C	ILE147
C	HOH324
C	HOH332
C	HOH355
D	LEU100
D	HOH344

site_id	AF1
Number of Residues	28
Details	binding site for Di-peptide HEC D 201 and CYS D 91

Chain	Residue
A	GLY90
D	ALA87
D	CYS88
D	SER89
D	GLY90
D	HIS92
D	GLY93
D	LYS99
D	LEU100
D	GLY101
D	PRO102
D	LEU104
D	TYR109
D	THR110
D	TYR111
D	ASN114
D	LEU120
D	ILE124
D	ALA128
D	ARG129
D	SER130
D	MET131
D	MET132
D	ILE147
D	HOH304
D	HOH327
D	HOH337
D	HOH341

site_id	AF2
Number of Residues	26
Details	binding site for Di-peptide HEC D 201 and CYS D 88

Chain	Residue
A	GLY90
D	PHE84
D	THR86
D	ALA87
D	SER89
D	GLY90
D	CYS91
D	HIS92
D	PRO102
D	LEU104
D	TYR109
D	THR110
D	TYR111
D	ASN114
D	LEU120
D	ILE124
D	ALA128
D	ARG129
D	SER130
D	MET131
D	MET132
D	ILE147
D	HOH304
D	HOH327
D	HOH337
D	HOH341

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)