7C43
The crystal structure of Trypanosoma brucei RNase D : AMP complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0000175 | molecular_function | 3'-5'-RNA exonuclease activity |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0005739 | cellular_component | mitochondrion |
| A | 0006139 | biological_process | nucleobase-containing compound metabolic process |
| A | 0008270 | molecular_function | zinc ion binding |
| A | 0008408 | molecular_function | 3'-5' exonuclease activity |
| A | 0020023 | cellular_component | kinetoplast |
| A | 0034587 | biological_process | piRNA processing |
| A | 0046872 | molecular_function | metal ion binding |
| A | 1990923 | cellular_component | PET complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 401 |
| Chain | Residue |
| A | CYS297 |
| A | CYS300 |
| A | HIS305 |
| A | CYS310 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 402 |
| Chain | Residue |
| A | CYS320 |
| A | CYS323 |
| A | HIS328 |
| A | CYS333 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue MN A 403 |
| Chain | Residue |
| A | GLU82 |
| A | ASP230 |
| A | AMP405 |
| A | ASP80 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue MN A 404 |
| Chain | Residue |
| A | ASP80 |
| A | AMP405 |
| A | HOH501 |
| A | HOH505 |
| site_id | AC5 |
| Number of Residues | 11 |
| Details | binding site for residue AMP A 405 |
| Chain | Residue |
| A | ASP80 |
| A | ILE81 |
| A | GLU82 |
| A | ALA83 |
| A | MSE206 |
| A | THR207 |
| A | ASP230 |
| A | MN403 |
| A | MN404 |
| A | HOH502 |
| A | HOH505 |
