7BXO
Crystal structure of the toxin-antitoxin with AMP-PNP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0006351 | biological_process | DNA-templated transcription |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016779 | molecular_function | nucleotidyltransferase activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0070733 | molecular_function | AMPylase activity |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0004518 | molecular_function | nuclease activity |
| B | 0004519 | molecular_function | endonuclease activity |
| B | 0004540 | molecular_function | RNA nuclease activity |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0110001 | cellular_component | toxin-antitoxin complex |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0004518 | molecular_function | nuclease activity |
| C | 0004519 | molecular_function | endonuclease activity |
| C | 0004540 | molecular_function | RNA nuclease activity |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0110001 | cellular_component | toxin-antitoxin complex |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0004518 | molecular_function | nuclease activity |
| D | 0004519 | molecular_function | endonuclease activity |
| D | 0004540 | molecular_function | RNA nuclease activity |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0110001 | cellular_component | toxin-antitoxin complex |
| E | 0000166 | molecular_function | nucleotide binding |
| E | 0003677 | molecular_function | DNA binding |
| E | 0005524 | molecular_function | ATP binding |
| E | 0006351 | biological_process | DNA-templated transcription |
| E | 0016740 | molecular_function | transferase activity |
| E | 0016779 | molecular_function | nucleotidyltransferase activity |
| E | 0046872 | molecular_function | metal ion binding |
| E | 0070733 | molecular_function | AMPylase activity |
| F | 0000166 | molecular_function | nucleotide binding |
| F | 0004518 | molecular_function | nuclease activity |
| F | 0004519 | molecular_function | endonuclease activity |
| F | 0004540 | molecular_function | RNA nuclease activity |
| F | 0016787 | molecular_function | hydrolase activity |
| F | 0110001 | cellular_component | toxin-antitoxin complex |
| G | 0000166 | molecular_function | nucleotide binding |
| G | 0004518 | molecular_function | nuclease activity |
| G | 0004519 | molecular_function | endonuclease activity |
| G | 0004540 | molecular_function | RNA nuclease activity |
| G | 0016787 | molecular_function | hydrolase activity |
| G | 0110001 | cellular_component | toxin-antitoxin complex |
| H | 0000166 | molecular_function | nucleotide binding |
| H | 0004518 | molecular_function | nuclease activity |
| H | 0004519 | molecular_function | endonuclease activity |
| H | 0004540 | molecular_function | RNA nuclease activity |
| H | 0016787 | molecular_function | hydrolase activity |
| H | 0110001 | cellular_component | toxin-antitoxin complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 12 |
| Details | binding site for residue ANP A 201 |
| Chain | Residue |
| A | PHE26 |
| A | MG203 |
| H | ASN7 |
| H | LYS8 |
| A | GLY27 |
| A | SER28 |
| A | HIS35 |
| A | SER38 |
| A | ASP39 |
| A | ASP41 |
| A | GLN85 |
| A | MG202 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 202 |
| Chain | Residue |
| A | ASP39 |
| A | ASP41 |
| A | ANP201 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 203 |
| Chain | Residue |
| A | ASP39 |
| A | ASP41 |
| A | ASP71 |
| A | ANP201 |
| site_id | AC4 |
| Number of Residues | 18 |
| Details | binding site for residue ANP E 201 |
| Chain | Residue |
| D | ASN7 |
| D | LYS8 |
| D | ARG59 |
| E | PHE26 |
| E | GLY27 |
| E | SER28 |
| E | HIS35 |
| E | SER38 |
| E | ASP39 |
| E | ASP41 |
| E | GLN85 |
| E | GLN89 |
| E | MG202 |
| E | MG203 |
| E | HOH303 |
| E | HOH304 |
| H | ASP103 |
| H | ALA104 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue MG E 202 |
| Chain | Residue |
| E | ASP39 |
| E | ASP41 |
| E | ANP201 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | binding site for residue MG E 203 |
| Chain | Residue |
| E | ASP39 |
| E | ASP41 |
| E | ASP71 |
| E | ANP201 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 28 |
| Details | Motif: {"description":"GSX(10)DXD motif","evidences":[{"source":"PubMed","id":"33045733","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"33045733","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7BXO","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 42 |
| Details | Motif: {"description":"RX(4)HXY motif","evidences":[{"source":"PubMed","id":"26112399","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33045733","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 12 |
| Details | Active site: {"evidences":[{"source":"UniProtKB","id":"A0A0B0QJR1","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 6 |
| Details | Modified residue: {"description":"O-tri-AMP-tyrosine","evidences":[{"source":"PubMed","id":"33045733","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33290744","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6M6V","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7AER","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |






