Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7BHP

Cryo-EM structure of the human Ebp1 - 80S ribosome

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003714molecular_functiontranscription corepressor activity
A0003723molecular_functionRNA binding
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005634cellular_componentnucleus
A0005730cellular_componentnucleolus
A0005737cellular_componentcytoplasm
A0006364biological_processrRNA processing
A0006417biological_processregulation of translation
A0016020cellular_componentmembrane
A0031625molecular_functionubiquitin protein ligase binding
A0035578cellular_componentazurophil granule lumen
A0043066biological_processnegative regulation of apoptotic process
A0045597biological_processpositive regulation of cell differentiation
A0045892biological_processnegative regulation of DNA-templated transcription
A0070062cellular_componentextracellular exosome
A1990904cellular_componentribonucleoprotein complex
LA0002181biological_processcytoplasmic translation
LA0003723molecular_functionRNA binding
LA0003735molecular_functionstructural constituent of ribosome
LA0005515molecular_functionprotein binding
LA0005654cellular_componentnucleoplasm
LA0005737cellular_componentcytoplasm
LA0005829cellular_componentcytosol
LA0005840cellular_componentribosome
LA0005925cellular_componentfocal adhesion
LA0006412biological_processtranslation
LA0014069cellular_componentpostsynaptic density
LA0015934cellular_componentlarge ribosomal subunit
LA0016020cellular_componentmembrane
LA0019843molecular_functionrRNA binding
LA0022625cellular_componentcytosolic large ribosomal subunit
LA0022626cellular_componentcytosolic ribosome
LA0045202cellular_componentsynapse
LA0098794cellular_componentpostsynapse
LA1990904cellular_componentribonucleoprotein complex
LB0002181biological_processcytoplasmic translation
LB0003723molecular_functionRNA binding
LB0003735molecular_functionstructural constituent of ribosome
LB0005515molecular_functionprotein binding
LB0005634cellular_componentnucleus
LB0005730cellular_componentnucleolus
LB0005737cellular_componentcytoplasm
LB0005829cellular_componentcytosol
LB0005840cellular_componentribosome
LB0005925cellular_componentfocal adhesion
LB0006412biological_processtranslation
LB0022625cellular_componentcytosolic large ribosomal subunit
LB0022626cellular_componentcytosolic ribosome
LB0032991cellular_componentprotein-containing complex
LB0070062cellular_componentextracellular exosome
LB0071353biological_processcellular response to interleukin-4
LB1990904cellular_componentribonucleoprotein complex
LC0002181biological_processcytoplasmic translation
LC0003723molecular_functionRNA binding
LC0003735molecular_functionstructural constituent of ribosome
LC0005515molecular_functionprotein binding
LC0005634cellular_componentnucleus
LC0005730cellular_componentnucleolus
LC0005737cellular_componentcytoplasm
LC0005791cellular_componentrough endoplasmic reticulum
LC0005829cellular_componentcytosol
LC0005840cellular_componentribosome
LC0005925cellular_componentfocal adhesion
LC0006412biological_processtranslation
LC0016020cellular_componentmembrane
LC0022625cellular_componentcytosolic large ribosomal subunit
LC0022626cellular_componentcytosolic ribosome
LC0070062cellular_componentextracellular exosome
LC1990904cellular_componentribonucleoprotein complex
LD0000027biological_processribosomal large subunit assembly
LD0002181biological_processcytoplasmic translation
LD0003723molecular_functionRNA binding
LD0003730molecular_functionmRNA 3'-UTR binding
LD0003735molecular_functionstructural constituent of ribosome
LD0005515molecular_functionprotein binding
LD0005634cellular_componentnucleus
LD0005654cellular_componentnucleoplasm
LD0005730cellular_componentnucleolus
LD0005737cellular_componentcytoplasm
LD0005783cellular_componentendoplasmic reticulum
LD0005829cellular_componentcytosol
LD0005840cellular_componentribosome
LD0005925cellular_componentfocal adhesion
LD0006364biological_processrRNA processing
LD0006412biological_processtranslation
LD0008097molecular_function5S rRNA binding
LD0010628biological_processpositive regulation of gene expression
LD0016020cellular_componentmembrane
LD0019843molecular_functionrRNA binding
LD0022625cellular_componentcytosolic large ribosomal subunit
LD0022626cellular_componentcytosolic ribosome
LD0031625molecular_functionubiquitin protein ligase binding
LD0032991cellular_componentprotein-containing complex
LD0042273biological_processribosomal large subunit biogenesis
LD0045727biological_processpositive regulation of translation
LD0048027molecular_functionmRNA 5'-UTR binding
LD0050821biological_processprotein stabilization
LD0070062cellular_componentextracellular exosome
LD1901796biological_processregulation of signal transduction by p53 class mediator
LD1904667biological_processnegative regulation of ubiquitin protein ligase activity
LD1990904cellular_componentribonucleoprotein complex
LD1990948molecular_functionubiquitin ligase inhibitor activity
LD2000059biological_processnegative regulation of ubiquitin-dependent protein catabolic process
LD2000435biological_processnegative regulation of protein neddylation
LE0002181biological_processcytoplasmic translation
LE0003677molecular_functionDNA binding
LE0003723molecular_functionRNA binding
LE0003735molecular_functionstructural constituent of ribosome
LE0005515molecular_functionprotein binding
LE0005634cellular_componentnucleus
LE0005737cellular_componentcytoplasm
LE0005783cellular_componentendoplasmic reticulum
LE0005791cellular_componentrough endoplasmic reticulum
LE0005829cellular_componentcytosol
LE0005840cellular_componentribosome
LE0005925cellular_componentfocal adhesion
LE0006355biological_processregulation of DNA-templated transcription
LE0006412biological_processtranslation
LE0014069cellular_componentpostsynaptic density
LE0016020cellular_componentmembrane
LE0022625cellular_componentcytosolic large ribosomal subunit
LE0022626cellular_componentcytosolic ribosome
LE0036464cellular_componentcytoplasmic ribonucleoprotein granule
LE0045202cellular_componentsynapse
LE0045296molecular_functioncadherin binding
LE1990904cellular_componentribonucleoprotein complex
LF0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LF0002181biological_processcytoplasmic translation
LF0003677molecular_functionDNA binding
LF0003723molecular_functionRNA binding
LF0003729molecular_functionmRNA binding
LF0003735molecular_functionstructural constituent of ribosome
LF0005515molecular_functionprotein binding
LF0005634cellular_componentnucleus
LF0005730cellular_componentnucleolus
LF0005737cellular_componentcytoplasm
LF0005829cellular_componentcytosol
LF0005840cellular_componentribosome
LF0005925cellular_componentfocal adhesion
LF0006364biological_processrRNA processing
LF0006412biological_processtranslation
LF0014069cellular_componentpostsynaptic density
LF0016020cellular_componentmembrane
LF0022625cellular_componentcytosolic large ribosomal subunit
LF0022626cellular_componentcytosolic ribosome
LF0042273biological_processribosomal large subunit biogenesis
LF0042802molecular_functionidentical protein binding
LF1990904cellular_componentribonucleoprotein complex
LG0000470biological_processmaturation of LSU-rRNA
LG0002181biological_processcytoplasmic translation
LG0003723molecular_functionRNA binding
LG0003735molecular_functionstructural constituent of ribosome
LG0005515molecular_functionprotein binding
LG0005634cellular_componentnucleus
LG0005730cellular_componentnucleolus
LG0005737cellular_componentcytoplasm
LG0005829cellular_componentcytosol
LG0005840cellular_componentribosome
LG0005925cellular_componentfocal adhesion
LG0006412biological_processtranslation
LG0016020cellular_componentmembrane
LG0022625cellular_componentcytosolic large ribosomal subunit
LG0022626cellular_componentcytosolic ribosome
LG0042254biological_processribosome biogenesis
LG0045202cellular_componentsynapse
LG0045296molecular_functioncadherin binding
LG1990904cellular_componentribonucleoprotein complex
LH0002181biological_processcytoplasmic translation
LH0003723molecular_functionRNA binding
LH0003735molecular_functionstructural constituent of ribosome
LH0005515molecular_functionprotein binding
LH0005634cellular_componentnucleus
LH0005737cellular_componentcytoplasm
LH0005829cellular_componentcytosol
LH0005840cellular_componentribosome
LH0005925cellular_componentfocal adhesion
LH0006412biological_processtranslation
LH0016020cellular_componentmembrane
LH0019843molecular_functionrRNA binding
LH0022625cellular_componentcytosolic large ribosomal subunit
LH0022626cellular_componentcytosolic ribosome
LH1990904cellular_componentribonucleoprotein complex
LI0000027biological_processribosomal large subunit assembly
LI0003735molecular_functionstructural constituent of ribosome
LI0005634cellular_componentnucleus
LI0005737cellular_componentcytoplasm
LI0005783cellular_componentendoplasmic reticulum
LI0005829cellular_componentcytosol
LI0005840cellular_componentribosome
LI0006412biological_processtranslation
LI0007141biological_processmale meiosis I
LI0007283biological_processspermatogenesis
LI0016020cellular_componentmembrane
LI0022625cellular_componentcytosolic large ribosomal subunit
LI0030154biological_processcell differentiation
LI0051321biological_processmeiotic cell cycle
LI1990904cellular_componentribonucleoprotein complex
LJ0000027biological_processribosomal large subunit assembly
LJ0002181biological_processcytoplasmic translation
LJ0003723molecular_functionRNA binding
LJ0003735molecular_functionstructural constituent of ribosome
LJ0005515molecular_functionprotein binding
LJ0005634cellular_componentnucleus
LJ0005654cellular_componentnucleoplasm
LJ0005730cellular_componentnucleolus
LJ0005737cellular_componentcytoplasm
LJ0005829cellular_componentcytosol
LJ0005840cellular_componentribosome
LJ0006364biological_processrRNA processing
LJ0006412biological_processtranslation
LJ0006605biological_processprotein targeting
LJ0008097molecular_function5S rRNA binding
LJ0010628biological_processpositive regulation of gene expression
LJ0016020cellular_componentmembrane
LJ0019843molecular_functionrRNA binding
LJ0022625cellular_componentcytosolic large ribosomal subunit
LJ0022626cellular_componentcytosolic ribosome
LJ0031625molecular_functionubiquitin protein ligase binding
LJ0032092biological_processpositive regulation of protein binding
LJ0032435biological_processnegative regulation of proteasomal ubiquitin-dependent protein catabolic process
LJ0032991cellular_componentprotein-containing complex
LJ0034504biological_processprotein localization to nucleus
LJ0042273biological_processribosomal large subunit biogenesis
LJ0050821biological_processprotein stabilization
LJ0070062cellular_componentextracellular exosome
LJ1901796biological_processregulation of signal transduction by p53 class mediator
LJ1901798biological_processpositive regulation of signal transduction by p53 class mediator
LJ1904667biological_processnegative regulation of ubiquitin protein ligase activity
LJ1990904cellular_componentribonucleoprotein complex
LJ1990948molecular_functionubiquitin ligase inhibitor activity
LJ2000059biological_processnegative regulation of ubiquitin-dependent protein catabolic process
LJ2000435biological_processnegative regulation of protein neddylation
LL0001824biological_processblastocyst development
LL0002181biological_processcytoplasmic translation
LL0003723molecular_functionRNA binding
LL0003735molecular_functionstructural constituent of ribosome
LL0005515molecular_functionprotein binding
LL0005634cellular_componentnucleus
LL0005730cellular_componentnucleolus
LL0005737cellular_componentcytoplasm
LL0005783cellular_componentendoplasmic reticulum
LL0005829cellular_componentcytosol
LL0005840cellular_componentribosome
LL0006412biological_processtranslation
LL0016020cellular_componentmembrane
LL0022625cellular_componentcytosolic large ribosomal subunit
LL0022626cellular_componentcytosolic ribosome
LL0045202cellular_componentsynapse
LL0060348biological_processbone development
LL1990904cellular_componentribonucleoprotein complex
LM0002181biological_processcytoplasmic translation
LM0003723molecular_functionRNA binding
LM0003735molecular_functionstructural constituent of ribosome
LM0005515molecular_functionprotein binding
LM0005737cellular_componentcytoplasm
LM0005829cellular_componentcytosol
LM0005840cellular_componentribosome
LM0006364biological_processrRNA processing
LM0006412biological_processtranslation
LM0014069cellular_componentpostsynaptic density
LM0016020cellular_componentmembrane
LM0022625cellular_componentcytosolic large ribosomal subunit
LM0022626cellular_componentcytosolic ribosome
LM0042273biological_processribosomal large subunit biogenesis
LM0045202cellular_componentsynapse
LM0045296molecular_functioncadherin binding
LM0070062cellular_componentextracellular exosome
LM1990904cellular_componentribonucleoprotein complex
LN0002181biological_processcytoplasmic translation
LN0003723molecular_functionRNA binding
LN0003735molecular_functionstructural constituent of ribosome
LN0005515molecular_functionprotein binding
LN0005634cellular_componentnucleus
LN0005737cellular_componentcytoplasm
LN0005829cellular_componentcytosol
LN0005840cellular_componentribosome
LN0006412biological_processtranslation
LN0022625cellular_componentcytosolic large ribosomal subunit
LN0022626cellular_componentcytosolic ribosome
LN0031672cellular_componentA band
LN0045202cellular_componentsynapse
LN0045296molecular_functioncadherin binding
LN0045471biological_processresponse to ethanol
LN1990904cellular_componentribonucleoprotein complex
LO0002181biological_processcytoplasmic translation
LO0003723molecular_functionRNA binding
LO0003729molecular_functionmRNA binding
LO0003735molecular_functionstructural constituent of ribosome
LO0005634cellular_componentnucleus
LO0005730cellular_componentnucleolus
LO0005737cellular_componentcytoplasm
LO0005829cellular_componentcytosol
LO0005840cellular_componentribosome
LO0005925cellular_componentfocal adhesion
LO0006412biological_processtranslation
LO0006417biological_processregulation of translation
LO0015934cellular_componentlarge ribosomal subunit
LO0016020cellular_componentmembrane
LO0017148biological_processnegative regulation of translation
LO0022625cellular_componentcytosolic large ribosomal subunit
LO0022626cellular_componentcytosolic ribosome
LO0032496biological_processresponse to lipopolysaccharide
LO0042592biological_processhomeostatic process
LO0045202cellular_componentsynapse
LO0048246biological_processmacrophage chemotaxis
LO0060425biological_processlung morphogenesis
LO0071346biological_processcellular response to type II interferon
LO0097452cellular_componentGAIT complex
LO1901194biological_processnegative regulation of formation of translation preinitiation complex
LO1990904cellular_componentribonucleoprotein complex
LP0002181biological_processcytoplasmic translation
LP0003723molecular_functionRNA binding
LP0003735molecular_functionstructural constituent of ribosome
LP0005515molecular_functionprotein binding
LP0005634cellular_componentnucleus
LP0005737cellular_componentcytoplasm
LP0005829cellular_componentcytosol
LP0005840cellular_componentribosome
LP0006412biological_processtranslation
LP0015934cellular_componentlarge ribosomal subunit
LP0022625cellular_componentcytosolic large ribosomal subunit
LP0022626cellular_componentcytosolic ribosome
LP1990904cellular_componentribonucleoprotein complex
LQ0002181biological_processcytoplasmic translation
LQ0003723molecular_functionRNA binding
LQ0003735molecular_functionstructural constituent of ribosome
LQ0005515molecular_functionprotein binding
LQ0005634cellular_componentnucleus
LQ0005730cellular_componentnucleolus
LQ0005737cellular_componentcytoplasm
LQ0005783cellular_componentendoplasmic reticulum
LQ0005791cellular_componentrough endoplasmic reticulum
LQ0005829cellular_componentcytosol
LQ0005840cellular_componentribosome
LQ0005925cellular_componentfocal adhesion
LQ0006412biological_processtranslation
LQ0016020cellular_componentmembrane
LQ0022625cellular_componentcytosolic large ribosomal subunit
LQ0022626cellular_componentcytosolic ribosome
LQ0043232cellular_componentintracellular non-membrane-bounded organelle
LQ1990904cellular_componentribonucleoprotein complex
LR0002181biological_processcytoplasmic translation
LR0003723molecular_functionRNA binding
LR0003735molecular_functionstructural constituent of ribosome
LR0005515molecular_functionprotein binding
LR0005730cellular_componentnucleolus
LR0005737cellular_componentcytoplasm
LR0005829cellular_componentcytosol
LR0005840cellular_componentribosome
LR0005925cellular_componentfocal adhesion
LR0006412biological_processtranslation
LR0016020cellular_componentmembrane
LR0022625cellular_componentcytosolic large ribosomal subunit
LR0022626cellular_componentcytosolic ribosome
LR0045202cellular_componentsynapse
LR1990904cellular_componentribonucleoprotein complex
LS0002181biological_processcytoplasmic translation
LS0003723molecular_functionRNA binding
LS0003735molecular_functionstructural constituent of ribosome
LS0005515molecular_functionprotein binding
LS0005737cellular_componentcytoplasm
LS0005829cellular_componentcytosol
LS0005840cellular_componentribosome
LS0006412biological_processtranslation
LS0016020cellular_componentmembrane
LS0022625cellular_componentcytosolic large ribosomal subunit
LS0022626cellular_componentcytosolic ribosome
LS1990904cellular_componentribonucleoprotein complex
LT0002181biological_processcytoplasmic translation
LT0003723molecular_functionRNA binding
LT0003735molecular_functionstructural constituent of ribosome
LT0005515molecular_functionprotein binding
LT0005737cellular_componentcytoplasm
LT0005783cellular_componentendoplasmic reticulum
LT0005829cellular_componentcytosol
LT0005840cellular_componentribosome
LT0006412biological_processtranslation
LT0016020cellular_componentmembrane
LT0022625cellular_componentcytosolic large ribosomal subunit
LT0022626cellular_componentcytosolic ribosome
LT0045202cellular_componentsynapse
LT1990904cellular_componentribonucleoprotein complex
LU0002181biological_processcytoplasmic translation
LU0003723molecular_functionRNA binding
LU0003735molecular_functionstructural constituent of ribosome
LU0005515molecular_functionprotein binding
LU0005634cellular_componentnucleus
LU0005737cellular_componentcytoplasm
LU0005829cellular_componentcytosol
LU0005840cellular_componentribosome
LU0005925cellular_componentfocal adhesion
LU0006412biological_processtranslation
LU0008201molecular_functionheparin binding
LU0022625cellular_componentcytosolic large ribosomal subunit
LU0022626cellular_componentcytosolic ribosome
LU0042802molecular_functionidentical protein binding
LU0045202cellular_componentsynapse
LU0046632biological_processalpha-beta T cell differentiation
LU0070062cellular_componentextracellular exosome
LU0098793cellular_componentpresynapse
LU0098978cellular_componentglutamatergic synapse
LU0140236biological_processtranslation at presynapse
LU1990904cellular_componentribonucleoprotein complex
LW0002181biological_processcytoplasmic translation
LW0003723molecular_functionRNA binding
LW0003729molecular_functionmRNA binding
LW0003735molecular_functionstructural constituent of ribosome
LW0005515molecular_functionprotein binding
LW0005737cellular_componentcytoplasm
LW0005783cellular_componentendoplasmic reticulum
LW0005829cellular_componentcytosol
LW0005840cellular_componentribosome
LW0006412biological_processtranslation
LW0010458biological_processexit from mitosis
LW0016020cellular_componentmembrane
LW0021554biological_processoptic nerve development
LW0022625cellular_componentcytosolic large ribosomal subunit
LW0022626cellular_componentcytosolic ribosome
LW0031290biological_processretinal ganglion cell axon guidance
LW0045202cellular_componentsynapse
LW0045296molecular_functioncadherin binding
LW0060041biological_processretina development in camera-type eye
LW0070062cellular_componentextracellular exosome
LW1990904cellular_componentribonucleoprotein complex
LX0002181biological_processcytoplasmic translation
LX0003723molecular_functionRNA binding
LX0003735molecular_functionstructural constituent of ribosome
LX0005515molecular_functionprotein binding
LX0005634cellular_componentnucleus
LX0005730cellular_componentnucleolus
LX0005737cellular_componentcytoplasm
LX0005829cellular_componentcytosol
LX0005840cellular_componentribosome
LX0006412biological_processtranslation
LX0019843molecular_functionrRNA binding
LX0022625cellular_componentcytosolic large ribosomal subunit
LX0022626cellular_componentcytosolic ribosome
LX0045296molecular_functioncadherin binding
LX0070062cellular_componentextracellular exosome
LX1904841molecular_functionTORC2 complex binding
LX1990904cellular_componentribonucleoprotein complex
LY0002181biological_processcytoplasmic translation
LY0003723molecular_functionRNA binding
LY0003735molecular_functionstructural constituent of ribosome
LY0005515molecular_functionprotein binding
LY0005654cellular_componentnucleoplasm
LY0005730cellular_componentnucleolus
LY0005737cellular_componentcytoplasm
LY0005829cellular_componentcytosol
LY0005840cellular_componentribosome
LY0006364biological_processrRNA processing
LY0006412biological_processtranslation
LY0006977biological_processDNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
LY0015934cellular_componentlarge ribosomal subunit
LY0016020cellular_componentmembrane
LY0022625cellular_componentcytosolic large ribosomal subunit
LY0022626cellular_componentcytosolic ribosome
LY0034644biological_processcellular response to UV
LY0042273biological_processribosomal large subunit biogenesis
LY0045202cellular_componentsynapse
LY0045727biological_processpositive regulation of translation
LY0048027molecular_functionmRNA 5'-UTR binding
LY0070062cellular_componentextracellular exosome
LY0071479biological_processcellular response to ionizing radiation
LY0071480biological_processcellular response to gamma radiation
LY1902164biological_processpositive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
LY1902167biological_processpositive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
LY1904803biological_processregulation of translation involved in cellular response to UV
LY1990904cellular_componentribonucleoprotein complex
LZ0002181biological_processcytoplasmic translation
LZ0003723molecular_functionRNA binding
LZ0003735molecular_functionstructural constituent of ribosome
LZ0005515molecular_functionprotein binding
LZ0005634cellular_componentnucleus
LZ0005654cellular_componentnucleoplasm
LZ0005730cellular_componentnucleolus
LZ0005737cellular_componentcytoplasm
LZ0005783cellular_componentendoplasmic reticulum
LZ0005791cellular_componentrough endoplasmic reticulum
LZ0005829cellular_componentcytosol
LZ0005840cellular_componentribosome
LZ0005925cellular_componentfocal adhesion
LZ0006364biological_processrRNA processing
LZ0006412biological_processtranslation
LZ0016020cellular_componentmembrane
LZ0022625cellular_componentcytosolic large ribosomal subunit
LZ0022626cellular_componentcytosolic ribosome
LZ0045202cellular_componentsynapse
LZ0070062cellular_componentextracellular exosome
LZ0098556cellular_componentcytoplasmic side of rough endoplasmic reticulum membrane
LZ1904044biological_processresponse to aldosterone
LZ1990904cellular_componentribonucleoprotein complex
La0002181biological_processcytoplasmic translation
La0003723molecular_functionRNA binding
La0003735molecular_functionstructural constituent of ribosome
La0005515molecular_functionprotein binding
La0005654cellular_componentnucleoplasm
La0005737cellular_componentcytoplasm
La0005783cellular_componentendoplasmic reticulum
La0005829cellular_componentcytosol
La0005840cellular_componentribosome
La0006412biological_processtranslation
La0015934cellular_componentlarge ribosomal subunit
La0016020cellular_componentmembrane
La0022625cellular_componentcytosolic large ribosomal subunit
La0022626cellular_componentcytosolic ribosome
La1990904cellular_componentribonucleoprotein complex
Lb0002181biological_processcytoplasmic translation
Lb0003723molecular_functionRNA binding
Lb0003735molecular_functionstructural constituent of ribosome
Lb0005737cellular_componentcytoplasm
Lb0005829cellular_componentcytosol
Lb0005840cellular_componentribosome
Lb0006412biological_processtranslation
Lb0007566biological_processembryo implantation
Lb0008201molecular_functionheparin binding
Lb0016020cellular_componentmembrane
Lb0022625cellular_componentcytosolic large ribosomal subunit
Lb0022626cellular_componentcytosolic ribosome
Lb0045296molecular_functioncadherin binding
Lb1990904cellular_componentribonucleoprotein complex
Lc0002181biological_processcytoplasmic translation
Lc0003723molecular_functionRNA binding
Lc0003735molecular_functionstructural constituent of ribosome
Lc0005515molecular_functionprotein binding
Lc0005634cellular_componentnucleus
Lc0005737cellular_componentcytoplasm
Lc0005829cellular_componentcytosol
Lc0005840cellular_componentribosome
Lc0005925cellular_componentfocal adhesion
Lc0006412biological_processtranslation
Lc0014069cellular_componentpostsynaptic density
Lc0016020cellular_componentmembrane
Lc0022625cellular_componentcytosolic large ribosomal subunit
Lc0022626cellular_componentcytosolic ribosome
Lc0031640biological_processkilling of cells of another organism
Lc0045202cellular_componentsynapse
Lc0050829biological_processdefense response to Gram-negative bacterium
Lc0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
Lc0070062cellular_componentextracellular exosome
Lc1990904cellular_componentribonucleoprotein complex
Ld0002181biological_processcytoplasmic translation
Ld0003723molecular_functionRNA binding
Ld0003735molecular_functionstructural constituent of ribosome
Ld0005515molecular_functionprotein binding
Ld0005737cellular_componentcytoplasm
Ld0005829cellular_componentcytosol
Ld0005840cellular_componentribosome
Ld0005925cellular_componentfocal adhesion
Ld0006412biological_processtranslation
Ld0016020cellular_componentmembrane
Ld0022625cellular_componentcytosolic large ribosomal subunit
Ld0022626cellular_componentcytosolic ribosome
Ld0070062cellular_componentextracellular exosome
Ld1990904cellular_componentribonucleoprotein complex
Le0002181biological_processcytoplasmic translation
Le0003723molecular_functionRNA binding
Le0003735molecular_functionstructural constituent of ribosome
Le0005737cellular_componentcytoplasm
Le0005829cellular_componentcytosol
Le0005840cellular_componentribosome
Le0006412biological_processtranslation
Le0016020cellular_componentmembrane
Le0022625cellular_componentcytosolic large ribosomal subunit
Le0022626cellular_componentcytosolic ribosome
Le1990904cellular_componentribonucleoprotein complex
Lf0000049molecular_functiontRNA binding
Lf0002181biological_processcytoplasmic translation
Lf0003723molecular_functionRNA binding
Lf0003735molecular_functionstructural constituent of ribosome
Lf0005515molecular_functionprotein binding
Lf0005737cellular_componentcytoplasm
Lf0005829cellular_componentcytosol
Lf0005840cellular_componentribosome
Lf0006364biological_processrRNA processing
Lf0006412biological_processtranslation
Lf0016020cellular_componentmembrane
Lf0022625cellular_componentcytosolic large ribosomal subunit
Lf0022626cellular_componentcytosolic ribosome
Lf0042273biological_processribosomal large subunit biogenesis
Lf0070062cellular_componentextracellular exosome
Lf1990904cellular_componentribonucleoprotein complex
Lg0002181biological_processcytoplasmic translation
Lg0003723molecular_functionRNA binding
Lg0003735molecular_functionstructural constituent of ribosome
Lg0005515molecular_functionprotein binding
Lg0005730cellular_componentnucleolus
Lg0005737cellular_componentcytoplasm
Lg0005783cellular_componentendoplasmic reticulum
Lg0005829cellular_componentcytosol
Lg0005840cellular_componentribosome
Lg0006412biological_processtranslation
Lg0022625cellular_componentcytosolic large ribosomal subunit
Lg0022626cellular_componentcytosolic ribosome
Lg0045202cellular_componentsynapse
Lg0045296molecular_functioncadherin binding
Lg0070062cellular_componentextracellular exosome
Lg1990904cellular_componentribonucleoprotein complex
Lh0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Lh0002181biological_processcytoplasmic translation
Lh0003723molecular_functionRNA binding
Lh0003729molecular_functionmRNA binding
Lh0003735molecular_functionstructural constituent of ribosome
Lh0005730cellular_componentnucleolus
Lh0005737cellular_componentcytoplasm
Lh0005829cellular_componentcytosol
Lh0005840cellular_componentribosome
Lh0006412biological_processtranslation
Lh0016020cellular_componentmembrane
Lh0022625cellular_componentcytosolic large ribosomal subunit
Lh0022626cellular_componentcytosolic ribosome
Lh1990904cellular_componentribonucleoprotein complex
Li0002181biological_processcytoplasmic translation
Li0003723molecular_functionRNA binding
Li0003735molecular_functionstructural constituent of ribosome
Li0005730cellular_componentnucleolus
Li0005737cellular_componentcytoplasm
Li0005829cellular_componentcytosol
Li0005840cellular_componentribosome
Li0006412biological_processtranslation
Li0016020cellular_componentmembrane
Li0022625cellular_componentcytosolic large ribosomal subunit
Li0022626cellular_componentcytosolic ribosome
Li0045202cellular_componentsynapse
Li1990904cellular_componentribonucleoprotein complex
Lj0002181biological_processcytoplasmic translation
Lj0003723molecular_functionRNA binding
Lj0003735molecular_functionstructural constituent of ribosome
Lj0005737cellular_componentcytoplasm
Lj0005829cellular_componentcytosol
Lj0005840cellular_componentribosome
Lj0006412biological_processtranslation
Lj0019843molecular_functionrRNA binding
Lj0022625cellular_componentcytosolic large ribosomal subunit
Lj0022626cellular_componentcytosolic ribosome
Lj0046872molecular_functionmetal ion binding
Lj0097371molecular_functionMDM2/MDM4 family protein binding
Lj1901798biological_processpositive regulation of signal transduction by p53 class mediator
Lj1990904cellular_componentribonucleoprotein complex
Lj1990948molecular_functionubiquitin ligase inhibitor activity
Lk0001501biological_processskeletal system development
Lk0001503biological_processossification
Lk0002181biological_processcytoplasmic translation
Lk0003723molecular_functionRNA binding
Lk0003735molecular_functionstructural constituent of ribosome
Lk0005515molecular_functionprotein binding
Lk0005737cellular_componentcytoplasm
Lk0005829cellular_componentcytosol
Lk0005840cellular_componentribosome
Lk0005925cellular_componentfocal adhesion
Lk0006412biological_processtranslation
Lk0006417biological_processregulation of translation
Lk0007605biological_processsensory perception of sound
Lk0014069cellular_componentpostsynaptic density
Lk0022618biological_processprotein-RNA complex assembly
Lk0022625cellular_componentcytosolic large ribosomal subunit
Lk0022626cellular_componentcytosolic ribosome
Lk0033291cellular_componenteukaryotic 80S initiation complex
Lk0034463biological_process90S preribosome assembly
Lk0042474biological_processmiddle ear morphogenesis
Lk0045202cellular_componentsynapse
Lk0048318biological_processaxial mesoderm development
Lk1990904cellular_componentribonucleoprotein complex
Ll0002181biological_processcytoplasmic translation
Ll0002227biological_processinnate immune response in mucosa
Ll0003723molecular_functionRNA binding
Ll0003735molecular_functionstructural constituent of ribosome
Ll0005615cellular_componentextracellular space
Ll0005737cellular_componentcytoplasm
Ll0005829cellular_componentcytosol
Ll0005840cellular_componentribosome
Ll0006412biological_processtranslation
Ll0019731biological_processantibacterial humoral response
Ll0022625cellular_componentcytosolic large ribosomal subunit
Ll0022626cellular_componentcytosolic ribosome
Ll0050830biological_processdefense response to Gram-positive bacterium
Ll0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
Ll1990904cellular_componentribonucleoprotein complex
Lm0002181biological_processcytoplasmic translation
Lm0003735molecular_functionstructural constituent of ribosome
Lm0005515molecular_functionprotein binding
Lm0005615cellular_componentextracellular space
Lm0005634cellular_componentnucleus
Lm0005654cellular_componentnucleoplasm
Lm0005737cellular_componentcytoplasm
Lm0005741cellular_componentmitochondrial outer membrane
Lm0005765cellular_componentlysosomal membrane
Lm0005783cellular_componentendoplasmic reticulum
Lm0005789cellular_componentendoplasmic reticulum membrane
Lm0005829cellular_componentcytosol
Lm0005840cellular_componentribosome
Lm0005886cellular_componentplasma membrane
Lm0006412biological_processtranslation
Lm0010008cellular_componentendosome membrane
Lm0016567biological_processprotein ubiquitination
Lm0019941biological_processmodification-dependent protein catabolic process
Lm0022625cellular_componentcytosolic large ribosomal subunit
Lm0022626cellular_componentcytosolic ribosome
Lm0022627cellular_componentcytosolic small ribosomal subunit
Lm0030666cellular_componentendocytic vesicle membrane
Lm0031386molecular_functionprotein tag activity
Lm0031625molecular_functionubiquitin protein ligase binding
Lm0031982cellular_componentvesicle
Lm0036211biological_processprotein modification process
Lm0045202cellular_componentsynapse
Lm0070062cellular_componentextracellular exosome
Lm1990904cellular_componentribonucleoprotein complex
Lo0002181biological_processcytoplasmic translation
Lo0003723molecular_functionRNA binding
Lo0003735molecular_functionstructural constituent of ribosome
Lo0005515molecular_functionprotein binding
Lo0005737cellular_componentcytoplasm
Lo0005783cellular_componentendoplasmic reticulum
Lo0005829cellular_componentcytosol
Lo0005840cellular_componentribosome
Lo0005886cellular_componentplasma membrane
Lo0006412biological_processtranslation
Lo0022625cellular_componentcytosolic large ribosomal subunit
Lo0022626cellular_componentcytosolic ribosome
Lo1990904cellular_componentribonucleoprotein complex
Lp0002181biological_processcytoplasmic translation
Lp0003723molecular_functionRNA binding
Lp0003735molecular_functionstructural constituent of ribosome
Lp0005515molecular_functionprotein binding
Lp0005634cellular_componentnucleus
Lp0005737cellular_componentcytoplasm
Lp0005829cellular_componentcytosol
Lp0005840cellular_componentribosome
Lp0005925cellular_componentfocal adhesion
Lp0006412biological_processtranslation
Lp0022625cellular_componentcytosolic large ribosomal subunit
Lp0022626cellular_componentcytosolic ribosome
Lp0046872molecular_functionmetal ion binding
Lp0070062cellular_componentextracellular exosome
Lp1990904cellular_componentribonucleoprotein complex
Lr0002181biological_processcytoplasmic translation
Lr0003723molecular_functionRNA binding
Lr0003735molecular_functionstructural constituent of ribosome
Lr0005515molecular_functionprotein binding
Lr0005737cellular_componentcytoplasm
Lr0005829cellular_componentcytosol
Lr0005840cellular_componentribosome
Lr0006412biological_processtranslation
Lr0016020cellular_componentmembrane
Lr0022625cellular_componentcytosolic large ribosomal subunit
Lr0022626cellular_componentcytosolic ribosome
Lr0030425cellular_componentdendrite
Lr0036464cellular_componentcytoplasmic ribonucleoprotein granule
Lr0044297cellular_componentcell body
Lr0045202cellular_componentsynapse
Lr0070062cellular_componentextracellular exosome
Lr1990904cellular_componentribonucleoprotein complex
Functional Information from PROSITE/UniProt
site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
LmLYS27-ASP52

site_idPS00709
Number of Residues25
DetailsRIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkyvlGyKqtLKmiRqGkaKlVIL
ChainResidueDetails
LcSER24-LEU48

site_idPS00993
Number of Residues21
DetailsRIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTacGKyyrvctLaIiDpG
ChainResidueDetails
LcGLU80-GLY100

site_idPS01145
Number of Residues14
DetailsRIBOSOMAL_L34E Ribosomal protein L34e signature. TaSnKtrlsRTPGN
ChainResidueDetails
LgTHR15-ASN28

site_idPS01194
Number of Residues24
DetailsRIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGYVIYRiRVrRG
ChainResidueDetails
LNASP46-GLY69

site_idPS01106
Number of Residues18
DetailsRIBOSOMAL_L18E Ribosomal protein L18e signature. KrLfmSRtnRPpLSLsRM
ChainResidueDetails
LQLYS49-MET66

site_idPS00526
Number of Residues20
DetailsRIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaSsvlrCGkkkVWLDP
ChainResidueDetails
LRGLN7-PRO26

site_idPS01073
Number of Residues18
DetailsRIBOSOMAL_L24E Ribosomal protein L24e signature. FsGykIyPGhGrrYaRtD
ChainResidueDetails
LWPHE8-ASP25

site_idPS00783
Number of Residues24
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VRGMLPhktkrGQaaldrLkVFdG
ChainResidueDetails
LOVAL84-GLY107

site_idPS01190
Number of Residues11
DetailsRIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRaMELLK
ChainResidueDetails
LiPRO52-LYS62

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinpymsspCHIEMiL
ChainResidueDetails
LPARG126-LEU150

site_idPS01144
Number of Residues15
DetailsRIBOSOMAL_L31E Ribosomal protein L31e signature. VRIDtrLNkAvWaKG
ChainResidueDetails
LdVAL62-GLY76

site_idPS00475
Number of Residues32
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGkGkLpkqp.ViVkakfFSrrAeekIksvG
ChainResidueDetails
LaLYS110-GLY141

site_idPS01108
Number of Residues19
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVqVVrGhyKGqqiGkV
ChainResidueDetails
LYASP52-VAL70

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FgqdemiDviGvTkGKGykGvtsR
ChainResidueDetails
LBPHE211-ARG234

site_idPS00700
Number of Residues22
DetailsRIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QattVknKdiRkFlDGIYVseK
ChainResidueDetails
LHGLN163-LYS184

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PrvRGVAmNPvE
ChainResidueDetails
LAPRO197-GLU208

site_idPS01105
Number of Residues22
DetailsRIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRaHGnsGmVrAkFrsnLP
ChainResidueDetails
LfGLY72-PRO93

site_idPS01082
Number of Residues18
DetailsRIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CrkmgVPYciIkGKarLG
ChainResidueDetails
LGCYS174-GLY191

site_idPS01170
Number of Residues19
DetailsRIBOSOMAL_L6E Ribosomal protein L6e signature. NrvPLRRthqkFVIATSt.K
ChainResidueDetails
LEASN182-LYS200

site_idPS00051
Number of Residues17
DetailsRIBOSOMAL_L39E Ribosomal protein L39e signature. KTgnkIryNskrRHWRR
ChainResidueDetails
LlLYS30-ARG46

site_idPS01077
Number of Residues20
DetailsRIBOSOMAL_L37E Ribosomal protein L37e signature. GTsSfGkRrnkt.HtlCrRCG
ChainResidueDetails
LjGLY4-GLY23

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. KLSKIRvVRKSIARV
ChainResidueDetails
LhLYS43-VAL57

site_idPS00580
Number of Residues21
DetailsRIBOSOMAL_L32E Ribosomal protein L32e signature. FiRhqsdRyvKIkrn..WRKprG
ChainResidueDetails
LePHE20-GLY40

site_idPS01172
Number of Residues12
DetailsRIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKivLRleC
ChainResidueDetails
LoLYS61-CYS72

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLApdydaldV
ChainResidueDetails
LXLYS134-VAL149

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. VLqlLrLrQifNgTfvklnkasinMLriVepYI
ChainResidueDetails
LFVAL108-ILE140

site_idPS01107
Number of Residues12
DetailsRIBOSOMAL_L27E Ribosomal protein L27e signature. GKNkWFFqkLRF
ChainResidueDetails
LZGLY125-PHE136

site_idPS01104
Number of Residues15
DetailsRIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFSLeELrvaG
ChainResidueDetails
LLARG71-GLY85

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLTGQtpVfSkARyT
ChainResidueDetails
LJLEU40-THR56

site_idPS01257
Number of Residues22
DetailsRIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqtGMRgAFGKPqGtvARV
ChainResidueDetails
LIALA108-VAL129

site_idPS00687
Number of Residues8
DetailsALDEHYDE_DEHYDR_GLU Aldehyde dehydrogenases glutamic acid active site. GESSGKNV
ChainResidueDetails
LCGLY15-VAL22

site_idPS00939
Number of Residues27
DetailsRIBOSOMAL_L1E Ribosomal protein L1e signature. NttqKryAIcSALaASAlpalvmsKGH
ChainResidueDetails
LCASN116-HIS142

site_idPS01171
Number of Residues26
DetailsRIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikgmgtvqk.GmpHkcYhGkTG
ChainResidueDetails
LTGLY37-GLY62

site_idPS01202
Number of Residues17
DetailsMAP_2 Methionine aminopeptidase subfamily 2 signature. DLvKIDlGvHVDGfiaN
ChainResidueDetails
AASP104-ASN120

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
LmARG72
ASER2
LRARG38

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER335
LpCYS42
LpCYS57
LpCYS60
LALYS250

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine; by PKC/PRKCD => ECO:0000269|PubMed:16832058, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
ChainResidueDetails
LGLYS245
LrLYS65
LGLYS21
LGLYS48
LGLYS125
LdLYS70
ASER361

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0000305|PubMed:11325528
ChainResidueDetails
ATHR366
LkLYS9

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:16964243, ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692
ChainResidueDetails
LBLYS366
ATHR386

site_idSWS_FT_FI6
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
LSLYS128
ALYS298
LSLYS170

site_idSWS_FT_FI7
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603
ChainResidueDetails
LLLYS174
LLLYS177
LBLYS386
LBLYS393
LmLYS6

site_idSWS_FT_FI8
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
ChainResidueDetails
LWLYS35
LWLYS147
LWLYS2
LmGLY76

site_idSWS_FT_FI9
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144
ChainResidueDetails
LmLYS11
LmLYS48

site_idSWS_FT_FI10
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:15466860
ChainResidueDetails
LmLYS27

site_idSWS_FT_FI11
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:25752573, ECO:0000269|PubMed:25752577, ECO:0000269|PubMed:34239127
ChainResidueDetails
LmLYS29
LCLYS327

site_idSWS_FT_FI12
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:25752577
ChainResidueDetails
LmLYS33
LCLYS364

site_idSWS_FT_FI13
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:18719106
ChainResidueDetails
LmLYS63

220472

PDB entries from 2024-05-29

PDB statisticsPDBj update infoContact PDBjnumon