Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0008901 | molecular_function | ferredoxin hydrogenase activity |
A | 0009375 | cellular_component | ferredoxin hydrogenase complex |
A | 0051536 | molecular_function | iron-sulfur cluster binding |
B | 0005515 | molecular_function | protein binding |
B | 0008901 | molecular_function | ferredoxin hydrogenase activity |
B | 0016151 | molecular_function | nickel cation binding |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0046872 | molecular_function | metal ion binding |
C | 0008901 | molecular_function | ferredoxin hydrogenase activity |
C | 0009375 | cellular_component | ferredoxin hydrogenase complex |
C | 0051536 | molecular_function | iron-sulfur cluster binding |
D | 0005515 | molecular_function | protein binding |
D | 0008901 | molecular_function | ferredoxin hydrogenase activity |
D | 0016151 | molecular_function | nickel cation binding |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | binding site for residue SF4 A 301 |
Chain | Residue |
A | HIS208 |
A | CYS211 |
A | TYR217 |
A | CYS232 |
A | ARG233 |
A | CYS238 |
A | GLY240 |
A | VAL260 |
site_id | AC2 |
Number of Residues | 9 |
Details | binding site for residue SF4 A 302 |
Chain | Residue |
A | CYS247 |
A | TRP252 |
A | CYS259 |
A | CYS265 |
A | ILE266 |
A | GLY267 |
A | CYS268 |
B | ARG182 |
A | THR243 |
site_id | AC3 |
Number of Residues | 11 |
Details | binding site for residue SF4 A 303 |
Chain | Residue |
A | GLY17 |
A | CYS18 |
A | CYS21 |
A | GLY119 |
A | THR120 |
A | CYS121 |
A | GLY158 |
A | CYS159 |
A | 6ML304 |
B | ARG73 |
B | HIS185 |
site_id | AC4 |
Number of Residues | 16 |
Details | binding site for residue 6ML A 304 |
Chain | Residue |
A | CYS18 |
A | THR19 |
A | GLY20 |
A | CYS21 |
A | GLU77 |
A | GLY78 |
A | GLY119 |
A | THR120 |
A | CYS121 |
A | GLY158 |
A | CYS159 |
A | PRO160 |
A | SF4303 |
A | HOH413 |
B | ARG73 |
B | HIS185 |
site_id | AC5 |
Number of Residues | 2 |
Details | binding site for residue KR A 306 |
Chain | Residue |
A | VAL10 |
A | VAL170 |
site_id | AC6 |
Number of Residues | 2 |
Details | binding site for residue KR A 307 |
Chain | Residue |
A | PHE73 |
A | LEU174 |
site_id | AC7 |
Number of Residues | 2 |
Details | binding site for residue KR A 308 |
site_id | AC8 |
Number of Residues | 1 |
Details | binding site for residue KR A 309 |
site_id | AC9 |
Number of Residues | 2 |
Details | binding site for residue KR A 311 |
Chain | Residue |
A | LEU116 |
A | ALA173 |
site_id | AD1 |
Number of Residues | 1 |
Details | binding site for residue KR A 312 |
site_id | AD2 |
Number of Residues | 3 |
Details | binding site for residue KR A 313 |
Chain | Residue |
A | PRO152 |
A | VAL154 |
A | VAL189 |
site_id | AD3 |
Number of Residues | 2 |
Details | binding site for residue KR A 314 |
site_id | AD4 |
Number of Residues | 1 |
Details | binding site for residue KR A 315 |
site_id | AD5 |
Number of Residues | 12 |
Details | binding site for residue FCO B 501 |
Chain | Residue |
B | CYS78 |
B | HIS82 |
B | ALA420 |
B | PRO421 |
B | ARG422 |
B | LEU425 |
B | ALA444 |
B | SER445 |
B | SEC489 |
B | CYS492 |
B | NI502 |
B | H2S504 |
site_id | AD6 |
Number of Residues | 6 |
Details | binding site for residue NI B 502 |
Chain | Residue |
B | CSD75 |
B | CYS78 |
B | SEC489 |
B | CYS492 |
B | FCO501 |
B | H2S504 |
site_id | AD7 |
Number of Residues | 6 |
Details | binding site for residue FE2 B 503 |
Chain | Residue |
B | GLU56 |
B | ILE441 |
B | HIS495 |
B | HOH602 |
B | HOH610 |
B | HOH611 |
site_id | AD8 |
Number of Residues | 6 |
Details | binding site for residue CL B 505 |
Chain | Residue |
B | CYS78 |
B | THR80 |
B | ALA81 |
B | PHE110 |
B | ASN113 |
B | PRO421 |
site_id | AD9 |
Number of Residues | 3 |
Details | binding site for residue KR B 506 |
Chain | Residue |
B | TYR123 |
B | GLY158 |
B | KR507 |
site_id | AE1 |
Number of Residues | 3 |
Details | binding site for residue KR B 507 |
Chain | Residue |
B | PHE122 |
B | ILE228 |
B | KR506 |
site_id | AE2 |
Number of Residues | 4 |
Details | binding site for residue KR B 508 |
Chain | Residue |
B | KR509 |
B | GLN128 |
B | VAL131 |
B | TYR162 |
site_id | AE3 |
Number of Residues | 4 |
Details | binding site for residue KR B 509 |
Chain | Residue |
B | PRO134 |
B | PHE139 |
B | TYR162 |
B | KR508 |
site_id | AE4 |
Number of Residues | 5 |
Details | binding site for residue KR B 510 |
Chain | Residue |
B | LEU150 |
B | LEU154 |
B | GLY158 |
B | VAL224 |
B | ILE228 |
site_id | AE5 |
Number of Residues | 1 |
Details | binding site for residue KR B 511 |
site_id | AE6 |
Number of Residues | 1 |
Details | binding site for residue KR B 512 |
site_id | AE7 |
Number of Residues | 3 |
Details | binding site for residue KR B 513 |
Chain | Residue |
B | ASN337 |
B | PRO339 |
B | TYR384 |
site_id | AE8 |
Number of Residues | 9 |
Details | binding site for residue SF4 C 301 |
Chain | Residue |
C | HIS208 |
C | CYS211 |
C | TYR213 |
C | LEU214 |
C | CYS232 |
C | ARG233 |
C | TYR234 |
C | CYS238 |
C | VAL260 |
site_id | AE9 |
Number of Residues | 8 |
Details | binding site for residue SF4 C 302 |
Chain | Residue |
C | THR243 |
C | CYS247 |
C | TRP252 |
C | CYS259 |
C | CYS265 |
C | ILE266 |
C | CYS268 |
D | ARG182 |
site_id | AF1 |
Number of Residues | 11 |
Details | binding site for residue SF4 C 303 |
Chain | Residue |
C | GLY17 |
C | CYS18 |
C | CYS21 |
C | GLY119 |
C | THR120 |
C | CYS121 |
C | GLY158 |
C | CYS159 |
C | 6ML304 |
D | ARG73 |
D | HIS185 |
site_id | AF2 |
Number of Residues | 16 |
Details | binding site for residue 6ML C 304 |
Chain | Residue |
C | CYS18 |
C | THR19 |
C | GLY20 |
C | CYS21 |
C | GLU77 |
C | GLY78 |
C | GLY119 |
C | THR120 |
C | CYS121 |
C | GLY158 |
C | CYS159 |
C | PRO160 |
C | SF4303 |
C | HOH404 |
D | ARG73 |
D | HIS185 |
site_id | AF3 |
Number of Residues | 4 |
Details | binding site for residue KR C 306 |
Chain | Residue |
C | VAL10 |
C | LEU116 |
C | VAL170 |
C | KR311 |
site_id | AF4 |
Number of Residues | 2 |
Details | binding site for residue KR C 307 |
Chain | Residue |
C | PHE73 |
C | LEU174 |
site_id | AF5 |
Number of Residues | 1 |
Details | binding site for residue KR C 308 |
site_id | AF6 |
Number of Residues | 1 |
Details | binding site for residue KR C 309 |
site_id | AF7 |
Number of Residues | 1 |
Details | binding site for residue KR C 310 |
site_id | AF8 |
Number of Residues | 3 |
Details | binding site for residue KR C 311 |
Chain | Residue |
C | KR306 |
C | KR310 |
C | KR312 |
site_id | AF9 |
Number of Residues | 4 |
Details | binding site for residue KR C 312 |
Chain | Residue |
C | VAL75 |
C | LEU116 |
C | ILE166 |
C | KR311 |
site_id | AG1 |
Number of Residues | 2 |
Details | binding site for residue KR C 314 |
Chain | Residue |
C | PRO152 |
C | VAL154 |
site_id | AG2 |
Number of Residues | 2 |
Details | binding site for residue KR C 315 |
Chain | Residue |
C | LEU172 |
C | VAL192 |
site_id | AG3 |
Number of Residues | 2 |
Details | binding site for residue KR C 316 |
site_id | AG4 |
Number of Residues | 5 |
Details | binding site for residue KR C 317 |
Chain | Residue |
C | ILE127 |
C | PHE273 |
D | GLN69 |
D | ILE70 |
D | ARG73 |
site_id | AG5 |
Number of Residues | 11 |
Details | binding site for residue FCO D 501 |
Chain | Residue |
D | CYS78 |
D | ALA420 |
D | PRO421 |
D | ARG422 |
D | LEU425 |
D | ALA444 |
D | SER445 |
D | SEC489 |
D | CYS492 |
D | NI502 |
D | H2S504 |
site_id | AG6 |
Number of Residues | 6 |
Details | binding site for residue NI D 502 |
Chain | Residue |
D | CSD75 |
D | CYS78 |
D | SEC489 |
D | CYS492 |
D | FCO501 |
D | H2S504 |
site_id | AG7 |
Number of Residues | 5 |
Details | binding site for residue FE2 D 503 |
Chain | Residue |
D | GLU56 |
D | ILE441 |
D | HIS495 |
D | HOH603 |
D | HOH604 |
site_id | AG8 |
Number of Residues | 6 |
Details | binding site for residue CL D 505 |
Chain | Residue |
D | CYS78 |
D | THR80 |
D | ALA81 |
D | PHE110 |
D | ASN113 |
D | PRO421 |
site_id | AG9 |
Number of Residues | 5 |
Details | binding site for residue KR D 506 |
Chain | Residue |
D | PHE122 |
D | TYR123 |
D | ALA127 |
D | GLY158 |
D | ILE228 |
site_id | AH1 |
Number of Residues | 2 |
Details | binding site for residue KR D 507 |
Chain | Residue |
D | TYR162 |
D | KR510 |
site_id | AH2 |
Number of Residues | 3 |
Details | binding site for residue KR D 508 |
Chain | Residue |
D | LEU426 |
D | VAL442 |
D | TRP447 |
site_id | AH3 |
Number of Residues | 1 |
Details | binding site for residue KR D 509 |
site_id | AH4 |
Number of Residues | 4 |
Details | binding site for residue KR D 510 |
Chain | Residue |
D | PRO134 |
D | PHE139 |
D | TYR162 |
D | KR507 |
site_id | AH5 |
Number of Residues | 5 |
Details | binding site for residue KR D 511 |
Chain | Residue |
D | LEU150 |
D | LEU154 |
D | GLY158 |
D | VAL224 |
D | ILE228 |
site_id | AH6 |
Number of Residues | 1 |
Details | binding site for residue KR D 512 |
site_id | AH7 |
Number of Residues | 13 |
Details | binding site for residues H2S B 504 and SEC B 489 |
Chain | Residue |
B | GLU28 |
B | CSD75 |
B | CYS78 |
B | ARG422 |
B | SER445 |
B | ASP487 |
B | PRO488 |
B | LEU490 |
B | GLY491 |
B | CYS492 |
B | ALA493 |
B | FCO501 |
B | NI502 |
site_id | AH8 |
Number of Residues | 13 |
Details | binding site for residues H2S B 504 and SEC B 489 |
Chain | Residue |
B | GLU28 |
B | CSD75 |
B | CYS78 |
B | ARG422 |
B | SER445 |
B | ASP487 |
B | PRO488 |
B | LEU490 |
B | GLY491 |
B | CYS492 |
B | ALA493 |
B | FCO501 |
B | NI502 |
site_id | AH9 |
Number of Residues | 12 |
Details | binding site for residues H2S D 504 and SEC D 489 |
Chain | Residue |
D | GLU28 |
D | CSD75 |
D | CYS78 |
D | ARG422 |
D | SER445 |
D | PRO488 |
D | LEU490 |
D | GLY491 |
D | CYS492 |
D | ALA493 |
D | FCO501 |
D | NI502 |
site_id | AI1 |
Number of Residues | 12 |
Details | binding site for residues H2S D 504 and SEC D 489 |
Chain | Residue |
D | GLU28 |
D | CSD75 |
D | CYS78 |
D | ARG422 |
D | SER445 |
D | PRO488 |
D | LEU490 |
D | GLY491 |
D | CYS492 |
D | ALA493 |
D | FCO501 |
D | NI502 |
Functional Information from PROSITE/UniProt
site_id | PS00507 |
Number of Residues | 26 |
Details | NI_HGENASE_L_1 Nickel-dependent hydrogenases large subunit signature 1. RGFEtilrgrdprdasqivQRiCGVC |
Chain | Residue | Details |
B | ARG53-CYS78 | |
site_id | PS00508 |
Number of Residues | 10 |
Details | NI_HGENASE_L_2 Nickel-dependent hydrogenases large subunit signature 2. FDPULGCav.H |
Chain | Residue | Details |
B | PHE486-HIS495 | |