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6Z6D

Crystal structure of the HK97 bacteriophage large terminase

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004518molecular_functionnuclease activity
A0004519molecular_functionendonuclease activity
A0005524molecular_functionATP binding
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue BR A 601
ChainResidue
AASN190
AALA455

site_idAC2
Number of Residues3
Detailsbinding site for residue BR A 602
ChainResidue
AGLY412
AGLY414
AASP417

site_idAC3
Number of Residues1
Detailsbinding site for residue BR A 603
ChainResidue
AASN98

site_idAC4
Number of Residues1
Detailsbinding site for residue BR A 604
ChainResidue
AHOH731

site_idAC5
Number of Residues2
Detailsbinding site for residue BR A 605
ChainResidue
AARG56
AASN266

site_idAC6
Number of Residues1
Detailsbinding site for residue BR A 606
ChainResidue
ALYS57

site_idAC7
Number of Residues5
Detailsbinding site for residue BR A 607
ChainResidue
AHIS71
AVAL78
ATHR81
AVAL130
AHOH724

site_idAC8
Number of Residues3
Detailsbinding site for residue BR A 608
ChainResidue
ASER427
AARG459
AHOH757

site_idAC9
Number of Residues3
Detailsbinding site for residue BR A 609
ChainResidue
ASER405
ALEU406
APRO407

site_idAD1
Number of Residues1
Detailsbinding site for residue BR A 610
ChainResidue
AILE8

site_idAD2
Number of Residues2
Detailsbinding site for residue BR A 611
ChainResidue
ALYS60
AGLN92

site_idAD3
Number of Residues2
Detailsbinding site for residue BR A 613
ChainResidue
APHE239
ASER241

site_idAD4
Number of Residues1
Detailsbinding site for residue BR A 614
ChainResidue
AVAL274

site_idAD5
Number of Residues3
Detailsbinding site for residue BR A 615
ChainResidue
ALYS121
AALA134
ASER136

site_idAD6
Number of Residues1
Detailsbinding site for residue BR A 617
ChainResidue
ALEU382

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues89
DetailsRegion: {"description":"Nuclease activity","evidences":[{"source":"UniProtKB","id":"P03694","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues7
DetailsMotif: {"description":"Walker A motif","evidences":[{"source":"PubMed","id":"35947691","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues5
DetailsMotif: {"description":"Walker B motif","evidences":[{"source":"PubMed","id":"35947691","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"35947691","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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