6Z6D
Crystal structure of the HK97 bacteriophage large terminase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-03-06 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9198 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 211.787, 39.146, 65.450 |
Unit cell angles | 90.00, 103.39, 90.00 |
Refinement procedure
Resolution | 103.230 - 2.200 |
R-factor | 0.2072 |
Rwork | 0.205 |
R-free | 0.25420 |
Structure solution method | MAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.258 |
Data reduction software | XDS (Oct 15, 2015) |
Data scaling software | XDS (Oct 15, 2015) |
Phasing software | SHELXD (2013/2) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 103.230 | 2.270 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.136 | 0.842 |
Number of reflections | 26796 | 2242 |
<I/σ(I)> | 7.1 | 1.8 |
Completeness [%] | 99.6 | 98.2 |
Redundancy | 3.3 | |
CC(1/2) | 0.991 | 0.595 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 1.6 M ammonium sulfate, pH 7.6 |