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6YWX

The structure of the mitoribosome from Neurospora crassa with tRNA bound to the E-site

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
00003735molecular_functionstructural constituent of ribosome
00005739cellular_componentmitochondrion
00005840cellular_componentribosome
00006412biological_processtranslation
01990904cellular_componentribonucleoprotein complex
000005739cellular_componentmitochondrion
000032780biological_processnegative regulation of ATP-dependent activity
000042030molecular_functionATPase inhibitor activity
10005739cellular_componentmitochondrion
110003735molecular_functionstructural constituent of ribosome
110005739cellular_componentmitochondrion
110005763cellular_componentmitochondrial small ribosomal subunit
110005840cellular_componentribosome
110032543biological_processmitochondrial translation
111990904cellular_componentribonucleoprotein complex
20003735molecular_functionstructural constituent of ribosome
20032543biological_processmitochondrial translation
220005739cellular_componentmitochondrion
30003735molecular_functionstructural constituent of ribosome
30005739cellular_componentmitochondrion
30005762cellular_componentmitochondrial large ribosomal subunit
30005840cellular_componentribosome
30006412biological_processtranslation
31990904cellular_componentribonucleoprotein complex
330005739cellular_componentmitochondrion
40003735molecular_functionstructural constituent of ribosome
40005739cellular_componentmitochondrion
40005762cellular_componentmitochondrial large ribosomal subunit
40005840cellular_componentribosome
40032543biological_processmitochondrial translation
41990904cellular_componentribonucleoprotein complex
440004784molecular_functionsuperoxide dismutase activity
440005737cellular_componentcytoplasm
440005739cellular_componentmitochondrion
440006801biological_processsuperoxide metabolic process
440019430biological_processremoval of superoxide radicals
440046872molecular_functionmetal ion binding
50003723molecular_functionRNA binding
50003725molecular_functiondouble-stranded RNA binding
50003735molecular_functionstructural constituent of ribosome
50004525molecular_functionribonuclease III activity
50005739cellular_componentmitochondrion
50005840cellular_componentribosome
50006396biological_processRNA processing
51990904cellular_componentribonucleoprotein complex
550004784molecular_functionsuperoxide dismutase activity
550005737cellular_componentcytoplasm
550005739cellular_componentmitochondrion
550006801biological_processsuperoxide metabolic process
550019430biological_processremoval of superoxide radicals
550046872molecular_functionmetal ion binding
60003735molecular_functionstructural constituent of ribosome
60005739cellular_componentmitochondrion
60005762cellular_componentmitochondrial large ribosomal subunit
60005840cellular_componentribosome
61990904cellular_componentribonucleoprotein complex
660003735molecular_functionstructural constituent of ribosome
660005739cellular_componentmitochondrion
660005763cellular_componentmitochondrial small ribosomal subunit
660032543biological_processmitochondrial translation
70003735molecular_functionstructural constituent of ribosome
70005739cellular_componentmitochondrion
70005762cellular_componentmitochondrial large ribosomal subunit
70005840cellular_componentribosome
70006412biological_processtranslation
71990904cellular_componentribonucleoprotein complex
770005739cellular_componentmitochondrion
80005739cellular_componentmitochondrion
80005840cellular_componentribosome
81990904cellular_componentribonucleoprotein complex
880003824molecular_functioncatalytic activity
880003860molecular_function3-hydroxyisobutyryl-CoA hydrolase activity
880005739cellular_componentmitochondrion
880006574biological_processvaline catabolic process
880016787molecular_functionhydrolase activity
90003735molecular_functionstructural constituent of ribosome
90004525molecular_functionribonuclease III activity
90005739cellular_componentmitochondrion
90005762cellular_componentmitochondrial large ribosomal subunit
90006396biological_processRNA processing
90032543biological_processmitochondrial translation
990005739cellular_componentmitochondrion
990032780biological_processnegative regulation of ATP-dependent activity
990042030molecular_functionATPase inhibitor activity
a0003735molecular_functionstructural constituent of ribosome
a0005739cellular_componentmitochondrion
a0005762cellular_componentmitochondrial large ribosomal subunit
a0005840cellular_componentribosome
a1990904cellular_componentribonucleoprotein complex
AA0003735molecular_functionstructural constituent of ribosome
AA0005739cellular_componentmitochondrion
AA0005763cellular_componentmitochondrial small ribosomal subunit
AA0070124biological_processmitochondrial translational initiation
b0003735molecular_functionstructural constituent of ribosome
b0005739cellular_componentmitochondrion
b0005762cellular_componentmitochondrial large ribosomal subunit
b0005840cellular_componentribosome
b1990904cellular_componentribonucleoprotein complex
B0003723molecular_functionRNA binding
B0003735molecular_functionstructural constituent of ribosome
B0005739cellular_componentmitochondrion
B0005762cellular_componentmitochondrial large ribosomal subunit
B0005840cellular_componentribosome
B0006412biological_processtranslation
B0015934cellular_componentlarge ribosomal subunit
B0016740molecular_functiontransferase activity
B0032543biological_processmitochondrial translation
B1990904cellular_componentribonucleoprotein complex
BB0003735molecular_functionstructural constituent of ribosome
BB0005739cellular_componentmitochondrion
BB0005763cellular_componentmitochondrial small ribosomal subunit
BB0005840cellular_componentribosome
BB0006412biological_processtranslation
BB0015935cellular_componentsmall ribosomal subunit
BB1990904cellular_componentribonucleoprotein complex
c0003735molecular_functionstructural constituent of ribosome
c0005739cellular_componentmitochondrion
c0005762cellular_componentmitochondrial large ribosomal subunit
c0005840cellular_componentribosome
c1990904cellular_componentribonucleoprotein complex
C0003735molecular_functionstructural constituent of ribosome
C0005739cellular_componentmitochondrion
C0005762cellular_componentmitochondrial large ribosomal subunit
C0005840cellular_componentribosome
C0006412biological_processtranslation
C1990904cellular_componentribonucleoprotein complex
CC0005739cellular_componentmitochondrion
CC0005840cellular_componentribosome
CC1990904cellular_componentribonucleoprotein complex
d0000002biological_processmitochondrial genome maintenance
d0000150molecular_functionDNA strand exchange activity
d0003697molecular_functionsingle-stranded DNA binding
d0003735molecular_functionstructural constituent of ribosome
d0005739cellular_componentmitochondrion
d0005840cellular_componentribosome
d0006310biological_processDNA recombination
d1990904cellular_componentribonucleoprotein complex
D0003735molecular_functionstructural constituent of ribosome
D0005739cellular_componentmitochondrion
D0005840cellular_componentribosome
D0006412biological_processtranslation
D1990904cellular_componentribonucleoprotein complex
DD0003723molecular_functionRNA binding
DD0003735molecular_functionstructural constituent of ribosome
DD0005739cellular_componentmitochondrion
DD0005763cellular_componentmitochondrial small ribosomal subunit
DD0005840cellular_componentribosome
DD0019843molecular_functionrRNA binding
DD0042274biological_processribosomal small subunit biogenesis
DD1990904cellular_componentribonucleoprotein complex
e0003735molecular_functionstructural constituent of ribosome
e0005739cellular_componentmitochondrion
e0005762cellular_componentmitochondrial large ribosomal subunit
e0005840cellular_componentribosome
e1990904cellular_componentribonucleoprotein complex
E0003723molecular_functionRNA binding
E0003735molecular_functionstructural constituent of ribosome
E0005739cellular_componentmitochondrion
E0005840cellular_componentribosome
E0006412biological_processtranslation
E0022625cellular_componentcytosolic large ribosomal subunit
E1990904cellular_componentribonucleoprotein complex
EE0003723molecular_functionRNA binding
EE0003735molecular_functionstructural constituent of ribosome
EE0005737cellular_componentcytoplasm
EE0005739cellular_componentmitochondrion
EE0005763cellular_componentmitochondrial small ribosomal subunit
EE0005840cellular_componentribosome
EE0006412biological_processtranslation
EE1990904cellular_componentribonucleoprotein complex
f0003735molecular_functionstructural constituent of ribosome
f0005739cellular_componentmitochondrion
f0005762cellular_componentmitochondrial large ribosomal subunit
f0006412biological_processtranslation
F0003735molecular_functionstructural constituent of ribosome
F0005739cellular_componentmitochondrion
F0005762cellular_componentmitochondrial large ribosomal subunit
F0005840cellular_componentribosome
F0006412biological_processtranslation
F0019843molecular_functionrRNA binding
F1990904cellular_componentribonucleoprotein complex
FF0003735molecular_functionstructural constituent of ribosome
FF0005737cellular_componentcytoplasm
FF0005739cellular_componentmitochondrion
FF0005763cellular_componentmitochondrial small ribosomal subunit
FF0005840cellular_componentribosome
FF0006412biological_processtranslation
FF0019843molecular_functionrRNA binding
FF0070181molecular_functionsmall ribosomal subunit rRNA binding
FF1990904cellular_componentribonucleoprotein complex
g0003735molecular_functionstructural constituent of ribosome
g0005739cellular_componentmitochondrion
g0005762cellular_componentmitochondrial large ribosomal subunit
g0005840cellular_componentribosome
g0006412biological_processtranslation
g0070180molecular_functionlarge ribosomal subunit rRNA binding
g1990904cellular_componentribonucleoprotein complex
G0003735molecular_functionstructural constituent of ribosome
G0005739cellular_componentmitochondrion
G0005840cellular_componentribosome
G0006412biological_processtranslation
G1990904cellular_componentribonucleoprotein complex
GG0000028biological_processribosomal small subunit assembly
GG0003729molecular_functionmRNA binding
GG0003735molecular_functionstructural constituent of ribosome
GG0005739cellular_componentmitochondrion
GG0005763cellular_componentmitochondrial small ribosomal subunit
GG0005840cellular_componentribosome
GG0006412biological_processtranslation
GG0019843molecular_functionrRNA binding
GG1990904cellular_componentribonucleoprotein complex
h0003735molecular_functionstructural constituent of ribosome
h0005739cellular_componentmitochondrion
h0005762cellular_componentmitochondrial large ribosomal subunit
h0005840cellular_componentribosome
h1990904cellular_componentribonucleoprotein complex
H0003729molecular_functionmRNA binding
H0003735molecular_functionstructural constituent of ribosome
H0005737cellular_componentcytoplasm
H0005739cellular_componentmitochondrion
H0005762cellular_componentmitochondrial large ribosomal subunit
H0005840cellular_componentribosome
H0006412biological_processtranslation
H0017148biological_processnegative regulation of translation
H1990904cellular_componentribonucleoprotein complex
HH0003735molecular_functionstructural constituent of ribosome
HH0005737cellular_componentcytoplasm
HH0005739cellular_componentmitochondrion
HH0005763cellular_componentmitochondrial small ribosomal subunit
HH0005840cellular_componentribosome
HH0006412biological_processtranslation
HH1990904cellular_componentribonucleoprotein complex
i0003735molecular_functionstructural constituent of ribosome
i0005739cellular_componentmitochondrion
i0005762cellular_componentmitochondrial large ribosomal subunit
i0005840cellular_componentribosome
i1990904cellular_componentribonucleoprotein complex
I0003735molecular_functionstructural constituent of ribosome
I0005739cellular_componentmitochondrion
I0005762cellular_componentmitochondrial large ribosomal subunit
I0005840cellular_componentribosome
I0006412biological_processtranslation
I0015934cellular_componentlarge ribosomal subunit
I0070180molecular_functionlarge ribosomal subunit rRNA binding
I1990904cellular_componentribonucleoprotein complex
II0003723molecular_functionRNA binding
II0003735molecular_functionstructural constituent of ribosome
II0005739cellular_componentmitochondrion
II0005763cellular_componentmitochondrial small ribosomal subunit
II0005840cellular_componentribosome
II0006412biological_processtranslation
II1990904cellular_componentribonucleoprotein complex
j0003735molecular_functionstructural constituent of ribosome
j0005739cellular_componentmitochondrion
j0005840cellular_componentribosome
j1990904cellular_componentribonucleoprotein complex
J0003735molecular_functionstructural constituent of ribosome
J0005739cellular_componentmitochondrion
J0005762cellular_componentmitochondrial large ribosomal subunit
J0005840cellular_componentribosome
J0006412biological_processtranslation
J0015934cellular_componentlarge ribosomal subunit
J1990904cellular_componentribonucleoprotein complex
JJ0003735molecular_functionstructural constituent of ribosome
JJ0005739cellular_componentmitochondrion
JJ0005840cellular_componentribosome
JJ0006412biological_processtranslation
JJ0015935cellular_componentsmall ribosomal subunit
JJ1990904cellular_componentribonucleoprotein complex
K0003735molecular_functionstructural constituent of ribosome
K0005739cellular_componentmitochondrion
K0005762cellular_componentmitochondrial large ribosomal subunit
K0005840cellular_componentribosome
K0006412biological_processtranslation
K0019843molecular_functionrRNA binding
K0032543biological_processmitochondrial translation
K1990904cellular_componentribonucleoprotein complex
KK0003735molecular_functionstructural constituent of ribosome
KK0005739cellular_componentmitochondrion
KK0005763cellular_componentmitochondrial small ribosomal subunit
KK0005840cellular_componentribosome
KK0006412biological_processtranslation
KK1990904cellular_componentribonucleoprotein complex
L0003735molecular_functionstructural constituent of ribosome
L0005739cellular_componentmitochondrion
L0005762cellular_componentmitochondrial large ribosomal subunit
L0005840cellular_componentribosome
L0006412biological_processtranslation
L1990904cellular_componentribonucleoprotein complex
LL0003735molecular_functionstructural constituent of ribosome
LL0005739cellular_componentmitochondrion
LL0005763cellular_componentmitochondrial small ribosomal subunit
LL0005840cellular_componentribosome
LL0006412biological_processtranslation
LL0015935cellular_componentsmall ribosomal subunit
LL1990904cellular_componentribonucleoprotein complex
M0003735molecular_functionstructural constituent of ribosome
M0005739cellular_componentmitochondrion
M0005762cellular_componentmitochondrial large ribosomal subunit
M0005840cellular_componentribosome
M0006412biological_processtranslation
M1990904cellular_componentribonucleoprotein complex
MM0003676molecular_functionnucleic acid binding
MM0003723molecular_functionRNA binding
MM0003735molecular_functionstructural constituent of ribosome
MM0005739cellular_componentmitochondrion
MM0005763cellular_componentmitochondrial small ribosomal subunit
MM0005777cellular_componentperoxisome
MM0005840cellular_componentribosome
MM0006412biological_processtranslation
MM0015935cellular_componentsmall ribosomal subunit
MM1990904cellular_componentribonucleoprotein complex
N0003735molecular_functionstructural constituent of ribosome
N0005737cellular_componentcytoplasm
N0005739cellular_componentmitochondrion
N0005762cellular_componentmitochondrial large ribosomal subunit
N0005840cellular_componentribosome
NN0003735molecular_functionstructural constituent of ribosome
NN0005737cellular_componentcytoplasm
NN0005739cellular_componentmitochondrion
NN0005763cellular_componentmitochondrial small ribosomal subunit
NN0005840cellular_componentribosome
NN0006412biological_processtranslation
NN1990904cellular_componentribonucleoprotein complex
O0003735molecular_functionstructural constituent of ribosome
O0005739cellular_componentmitochondrion
O0005762cellular_componentmitochondrial large ribosomal subunit
O0005840cellular_componentribosome
O0006412biological_processtranslation
O0015934cellular_componentlarge ribosomal subunit
O1990904cellular_componentribonucleoprotein complex
OO0003735molecular_functionstructural constituent of ribosome
OO0005737cellular_componentcytoplasm
OO0005739cellular_componentmitochondrion
OO0005840cellular_componentribosome
OO0006412biological_processtranslation
OO1990904cellular_componentribonucleoprotein complex
P0003735molecular_functionstructural constituent of ribosome
P0005739cellular_componentmitochondrion
P0005762cellular_componentmitochondrial large ribosomal subunit
P0005840cellular_componentribosome
P0006412biological_processtranslation
P0032543biological_processmitochondrial translation
P1990904cellular_componentribonucleoprotein complex
PP0003735molecular_functionstructural constituent of ribosome
PP0005737cellular_componentcytoplasm
PP0005739cellular_componentmitochondrion
PP0005763cellular_componentmitochondrial small ribosomal subunit
PP0005840cellular_componentribosome
PP0006412biological_processtranslation
PP1990904cellular_componentribonucleoprotein complex
Q0003735molecular_functionstructural constituent of ribosome
Q0005739cellular_componentmitochondrion
Q0005840cellular_componentribosome
Q0006412biological_processtranslation
QQ0003735molecular_functionstructural constituent of ribosome
QQ0005739cellular_componentmitochondrion
QQ0005840cellular_componentribosome
QQ0006412biological_processtranslation
QQ1990904cellular_componentribonucleoprotein complex
R0003735molecular_functionstructural constituent of ribosome
R0005739cellular_componentmitochondrion
R0005762cellular_componentmitochondrial large ribosomal subunit
R0005840cellular_componentribosome
R0006412biological_processtranslation
R1990904cellular_componentribonucleoprotein complex
RR0003735molecular_functionstructural constituent of ribosome
RR0005739cellular_componentmitochondrion
RR0005763cellular_componentmitochondrial small ribosomal subunit
RR0005840cellular_componentribosome
RR0006412biological_processtranslation
RR0070181molecular_functionsmall ribosomal subunit rRNA binding
RR1990904cellular_componentribonucleoprotein complex
S0003735molecular_functionstructural constituent of ribosome
S0005739cellular_componentmitochondrion
S0005762cellular_componentmitochondrial large ribosomal subunit
S0005840cellular_componentribosome
S1990904cellular_componentribonucleoprotein complex
SS0000028biological_processribosomal small subunit assembly
SS0003723molecular_functionRNA binding
SS0003735molecular_functionstructural constituent of ribosome
SS0005737cellular_componentcytoplasm
SS0005739cellular_componentmitochondrion
SS0005763cellular_componentmitochondrial small ribosomal subunit
SS0005840cellular_componentribosome
SS0006412biological_processtranslation
SS1990904cellular_componentribonucleoprotein complex
T0003735molecular_functionstructural constituent of ribosome
T0005739cellular_componentmitochondrion
T0005761cellular_componentmitochondrial ribosome
T0005762cellular_componentmitochondrial large ribosomal subunit
T0005840cellular_componentribosome
T0006412biological_processtranslation
T0032543biological_processmitochondrial translation
T1990904cellular_componentribonucleoprotein complex
TT0003735molecular_functionstructural constituent of ribosome
TT0005739cellular_componentmitochondrion
TT0005840cellular_componentribosome
TT0006412biological_processtranslation
TT1990904cellular_componentribonucleoprotein complex
U0003735molecular_functionstructural constituent of ribosome
U0005739cellular_componentmitochondrion
U0005840cellular_componentribosome
U0006412biological_processtranslation
U0015934cellular_componentlarge ribosomal subunit
U1990904cellular_componentribonucleoprotein complex
UU0003735molecular_functionstructural constituent of ribosome
UU0005763cellular_componentmitochondrial small ribosomal subunit
V0003735molecular_functionstructural constituent of ribosome
V0005739cellular_componentmitochondrion
V0005762cellular_componentmitochondrial large ribosomal subunit
V0032543biological_processmitochondrial translation
VV0005739cellular_componentmitochondrion
W0003735molecular_functionstructural constituent of ribosome
W0005739cellular_componentmitochondrion
W0005762cellular_componentmitochondrial large ribosomal subunit
W0005840cellular_componentribosome
W0006412biological_processtranslation
W0015934cellular_componentlarge ribosomal subunit
W0046872molecular_functionmetal ion binding
W1990904cellular_componentribonucleoprotein complex
WW0005739cellular_componentmitochondrion
X0003735molecular_functionstructural constituent of ribosome
X0005739cellular_componentmitochondrion
X0005840cellular_componentribosome
X0006412biological_processtranslation
X1990904cellular_componentribonucleoprotein complex
XX0003735molecular_functionstructural constituent of ribosome
XX0005739cellular_componentmitochondrion
XX0005763cellular_componentmitochondrial small ribosomal subunit
XX0005840cellular_componentribosome
XX0032543biological_processmitochondrial translation
XX1990904cellular_componentribonucleoprotein complex
Y0003735molecular_functionstructural constituent of ribosome
Y0005739cellular_componentmitochondrion
Y0005762cellular_componentmitochondrial large ribosomal subunit
Y0005840cellular_componentribosome
Y0006412biological_processtranslation
Y1990904cellular_componentribonucleoprotein complex
YY0005739cellular_componentmitochondrion
YY0005840cellular_componentribosome
YY1990904cellular_componentribonucleoprotein complex
ZZ0003735molecular_functionstructural constituent of ribosome
ZZ0005739cellular_componentmitochondrion
ZZ0005763cellular_componentmitochondrial small ribosomal subunit
ZZ0005840cellular_componentribosome
ZZ0032543biological_processmitochondrial translation
ZZ1990904cellular_componentribonucleoprotein complex
Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkqkvqrr.DGsvvrFddNacVL
ChainResidueDetails
IALA69-LEU95

site_idPS00166
Number of Residues21
DetailsENOYL_COA_HYDRATASE Enoyl-CoA hydratase/isomerase signature. VAfLDGitmGGGvglsIhAPF
ChainResidueDetails
88VAL163-PHE183

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGKdyidltVteemVGhkLGEFsaT
ChainResidueDetails
SSASN57-THR81

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGttGQaeAitlAiAKAL
ChainResidueDetails
IIGLY254-LEU272

site_idPS00525
Number of Residues9
DetailsRIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGI
ChainResidueDetails
FPRO232-ILE240

site_idPS00626
Number of Residues11
DetailsRCC1_2 Regulator of chromosome condensation (RCC1) signature 2. FTSGtQHGLTL
ChainResidueDetails
AAPHE98-LEU108

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLdiaIFRalfAsSarqARqMV
ChainResidueDetails
DDLEU140-VAL164

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. VLaaLgLrRrnQtVfhpvepqfagMLmkVkeLV
ChainResidueDetails
UVAL22-VAL54

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGrRHamGlpVRGQ
ChainResidueDetails
MMARG87-GLN100

site_idPS00701
Number of Residues12
DetailsRIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGsfdhW
ChainResidueDetails
KARG149-TRP160

site_idPS00732
Number of Residues10
DetailsRIBOSOMAL_S16 Ribosomal protein S16 signature. LkLRLARFGR
ChainResidueDetails
PPLEU3-ARG12

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. LeDLMAAQAHMG
ChainResidueDetails
BBLEU160-GLY171

site_idPS01167
Number of Residues23
DetailsRIBOSOMAL_L17 Ribosomal protein L17 signature. IhTTypKaKeaqrlaEkLITlSK
ChainResidueDetails
LILE35-LYS57

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:33056988
ChainResidueDetails
XXLEU150
WCYS97
WCYS107
WCYS110

225946

PDB entries from 2024-10-09

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