6YWS
The structure of the large subunit of the mitoribosome from Neurospora crassa
This is a non-PDB format compatible entry.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| 0 | 0003735 | molecular_function | structural constituent of ribosome |
| 0 | 0005739 | cellular_component | mitochondrion |
| 0 | 0005840 | cellular_component | ribosome |
| 0 | 0006412 | biological_process | translation |
| 0 | 1990904 | cellular_component | ribonucleoprotein complex |
| 1 | 0005739 | cellular_component | mitochondrion |
| 2 | 0003735 | molecular_function | structural constituent of ribosome |
| 2 | 0032543 | biological_process | mitochondrial translation |
| 3 | 0003735 | molecular_function | structural constituent of ribosome |
| 3 | 0005739 | cellular_component | mitochondrion |
| 3 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 3 | 0005840 | cellular_component | ribosome |
| 3 | 0006412 | biological_process | translation |
| 3 | 1990904 | cellular_component | ribonucleoprotein complex |
| 4 | 0003735 | molecular_function | structural constituent of ribosome |
| 4 | 0005739 | cellular_component | mitochondrion |
| 4 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 4 | 0005840 | cellular_component | ribosome |
| 4 | 0032543 | biological_process | mitochondrial translation |
| 4 | 1990904 | cellular_component | ribonucleoprotein complex |
| 5 | 0003723 | molecular_function | RNA binding |
| 5 | 0003725 | molecular_function | double-stranded RNA binding |
| 5 | 0003735 | molecular_function | structural constituent of ribosome |
| 5 | 0004525 | molecular_function | ribonuclease III activity |
| 5 | 0005739 | cellular_component | mitochondrion |
| 5 | 0005840 | cellular_component | ribosome |
| 5 | 0006396 | biological_process | RNA processing |
| 5 | 1990904 | cellular_component | ribonucleoprotein complex |
| 6 | 0003735 | molecular_function | structural constituent of ribosome |
| 6 | 0005739 | cellular_component | mitochondrion |
| 6 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 6 | 0005840 | cellular_component | ribosome |
| 6 | 1990904 | cellular_component | ribonucleoprotein complex |
| 7 | 0003735 | molecular_function | structural constituent of ribosome |
| 7 | 0005739 | cellular_component | mitochondrion |
| 7 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 7 | 0005840 | cellular_component | ribosome |
| 7 | 0006412 | biological_process | translation |
| 7 | 1990904 | cellular_component | ribonucleoprotein complex |
| 8 | 0005739 | cellular_component | mitochondrion |
| 8 | 0005840 | cellular_component | ribosome |
| 8 | 1990904 | cellular_component | ribonucleoprotein complex |
| 9 | 0003735 | molecular_function | structural constituent of ribosome |
| 9 | 0004525 | molecular_function | ribonuclease III activity |
| 9 | 0005739 | cellular_component | mitochondrion |
| 9 | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| 9 | 0006396 | biological_process | RNA processing |
| 9 | 0032543 | biological_process | mitochondrial translation |
| a | 0003735 | molecular_function | structural constituent of ribosome |
| a | 0005739 | cellular_component | mitochondrion |
| a | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| a | 0005840 | cellular_component | ribosome |
| a | 1990904 | cellular_component | ribonucleoprotein complex |
| b | 0003735 | molecular_function | structural constituent of ribosome |
| b | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| B | 0003723 | molecular_function | RNA binding |
| B | 0003735 | molecular_function | structural constituent of ribosome |
| B | 0005739 | cellular_component | mitochondrion |
| B | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| B | 0005840 | cellular_component | ribosome |
| B | 0006412 | biological_process | translation |
| B | 0015934 | cellular_component | large ribosomal subunit |
| B | 0016740 | molecular_function | transferase activity |
| B | 0032543 | biological_process | mitochondrial translation |
| B | 1990904 | cellular_component | ribonucleoprotein complex |
| c | 0003735 | molecular_function | structural constituent of ribosome |
| c | 0005739 | cellular_component | mitochondrion |
| c | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| c | 0005840 | cellular_component | ribosome |
| c | 1990904 | cellular_component | ribonucleoprotein complex |
| C | 0003735 | molecular_function | structural constituent of ribosome |
| C | 0005739 | cellular_component | mitochondrion |
| C | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| C | 0005840 | cellular_component | ribosome |
| C | 0006412 | biological_process | translation |
| C | 1990904 | cellular_component | ribonucleoprotein complex |
| d | 0000002 | biological_process | mitochondrial genome maintenance |
| d | 0000150 | molecular_function | DNA strand exchange activity |
| d | 0003697 | molecular_function | single-stranded DNA binding |
| d | 0003735 | molecular_function | structural constituent of ribosome |
| d | 0005739 | cellular_component | mitochondrion |
| d | 0005840 | cellular_component | ribosome |
| d | 0006310 | biological_process | DNA recombination |
| d | 1990904 | cellular_component | ribonucleoprotein complex |
| D | 0003735 | molecular_function | structural constituent of ribosome |
| D | 0005739 | cellular_component | mitochondrion |
| D | 0005840 | cellular_component | ribosome |
| D | 0006412 | biological_process | translation |
| D | 1990904 | cellular_component | ribonucleoprotein complex |
| e | 0003735 | molecular_function | structural constituent of ribosome |
| e | 0005739 | cellular_component | mitochondrion |
| e | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| e | 0005840 | cellular_component | ribosome |
| e | 1990904 | cellular_component | ribonucleoprotein complex |
| E | 0003723 | molecular_function | RNA binding |
| E | 0003735 | molecular_function | structural constituent of ribosome |
| E | 0005739 | cellular_component | mitochondrion |
| E | 0005840 | cellular_component | ribosome |
| E | 0006412 | biological_process | translation |
| E | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| E | 1990904 | cellular_component | ribonucleoprotein complex |
| f | 0003735 | molecular_function | structural constituent of ribosome |
| f | 0005739 | cellular_component | mitochondrion |
| f | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| f | 0006412 | biological_process | translation |
| F | 0003735 | molecular_function | structural constituent of ribosome |
| F | 0005739 | cellular_component | mitochondrion |
| F | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| F | 0005840 | cellular_component | ribosome |
| F | 0006412 | biological_process | translation |
| F | 0019843 | molecular_function | rRNA binding |
| F | 1990904 | cellular_component | ribonucleoprotein complex |
| g | 0003735 | molecular_function | structural constituent of ribosome |
| g | 0005739 | cellular_component | mitochondrion |
| g | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| g | 0005840 | cellular_component | ribosome |
| g | 0006412 | biological_process | translation |
| g | 0070180 | molecular_function | large ribosomal subunit rRNA binding |
| g | 1990904 | cellular_component | ribonucleoprotein complex |
| G | 0003735 | molecular_function | structural constituent of ribosome |
| G | 0005739 | cellular_component | mitochondrion |
| G | 0005840 | cellular_component | ribosome |
| G | 0006412 | biological_process | translation |
| G | 1990904 | cellular_component | ribonucleoprotein complex |
| h | 0003735 | molecular_function | structural constituent of ribosome |
| h | 0005739 | cellular_component | mitochondrion |
| h | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| h | 0005840 | cellular_component | ribosome |
| h | 1990904 | cellular_component | ribonucleoprotein complex |
| H | 0003729 | molecular_function | mRNA binding |
| H | 0003735 | molecular_function | structural constituent of ribosome |
| H | 0005737 | cellular_component | cytoplasm |
| H | 0005739 | cellular_component | mitochondrion |
| H | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| H | 0005840 | cellular_component | ribosome |
| H | 0006412 | biological_process | translation |
| H | 0017148 | biological_process | negative regulation of translation |
| H | 1990904 | cellular_component | ribonucleoprotein complex |
| i | 0003735 | molecular_function | structural constituent of ribosome |
| i | 0005739 | cellular_component | mitochondrion |
| i | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| i | 0005840 | cellular_component | ribosome |
| i | 1990904 | cellular_component | ribonucleoprotein complex |
| I | 0003735 | molecular_function | structural constituent of ribosome |
| I | 0005739 | cellular_component | mitochondrion |
| I | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| I | 0005840 | cellular_component | ribosome |
| I | 0006412 | biological_process | translation |
| I | 0015934 | cellular_component | large ribosomal subunit |
| I | 0070180 | molecular_function | large ribosomal subunit rRNA binding |
| I | 1990904 | cellular_component | ribonucleoprotein complex |
| j | 0003735 | molecular_function | structural constituent of ribosome |
| j | 0005739 | cellular_component | mitochondrion |
| j | 0005840 | cellular_component | ribosome |
| j | 1990904 | cellular_component | ribonucleoprotein complex |
| J | 0003735 | molecular_function | structural constituent of ribosome |
| J | 0006412 | biological_process | translation |
| J | 0015934 | cellular_component | large ribosomal subunit |
| K | 0003735 | molecular_function | structural constituent of ribosome |
| K | 0005739 | cellular_component | mitochondrion |
| K | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| K | 0005840 | cellular_component | ribosome |
| K | 0006412 | biological_process | translation |
| K | 0019843 | molecular_function | rRNA binding |
| K | 0032543 | biological_process | mitochondrial translation |
| K | 1990904 | cellular_component | ribonucleoprotein complex |
| L | 0003735 | molecular_function | structural constituent of ribosome |
| L | 0005739 | cellular_component | mitochondrion |
| L | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| L | 0005840 | cellular_component | ribosome |
| L | 0006412 | biological_process | translation |
| L | 1990904 | cellular_component | ribonucleoprotein complex |
| M | 0003735 | molecular_function | structural constituent of ribosome |
| M | 0005739 | cellular_component | mitochondrion |
| M | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| M | 0005840 | cellular_component | ribosome |
| M | 0006412 | biological_process | translation |
| M | 1990904 | cellular_component | ribonucleoprotein complex |
| N | 0003735 | molecular_function | structural constituent of ribosome |
| N | 0005737 | cellular_component | cytoplasm |
| N | 0005739 | cellular_component | mitochondrion |
| N | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| N | 0005840 | cellular_component | ribosome |
| O | 0003735 | molecular_function | structural constituent of ribosome |
| O | 0005739 | cellular_component | mitochondrion |
| O | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| O | 0005840 | cellular_component | ribosome |
| O | 0006412 | biological_process | translation |
| O | 0015934 | cellular_component | large ribosomal subunit |
| O | 1990904 | cellular_component | ribonucleoprotein complex |
| P | 0003735 | molecular_function | structural constituent of ribosome |
| P | 0005739 | cellular_component | mitochondrion |
| P | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| P | 0005840 | cellular_component | ribosome |
| P | 0006412 | biological_process | translation |
| P | 0032543 | biological_process | mitochondrial translation |
| P | 1990904 | cellular_component | ribonucleoprotein complex |
| Q | 0003735 | molecular_function | structural constituent of ribosome |
| Q | 0005739 | cellular_component | mitochondrion |
| Q | 0005840 | cellular_component | ribosome |
| Q | 0006412 | biological_process | translation |
| R | 0003735 | molecular_function | structural constituent of ribosome |
| R | 0005739 | cellular_component | mitochondrion |
| R | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| R | 0005840 | cellular_component | ribosome |
| R | 0006412 | biological_process | translation |
| R | 1990904 | cellular_component | ribonucleoprotein complex |
| S | 0003735 | molecular_function | structural constituent of ribosome |
| S | 0005739 | cellular_component | mitochondrion |
| S | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| S | 0005840 | cellular_component | ribosome |
| S | 1990904 | cellular_component | ribonucleoprotein complex |
| T | 0003735 | molecular_function | structural constituent of ribosome |
| T | 0005739 | cellular_component | mitochondrion |
| T | 0005761 | cellular_component | mitochondrial ribosome |
| T | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| T | 0005840 | cellular_component | ribosome |
| T | 0006412 | biological_process | translation |
| T | 0032543 | biological_process | mitochondrial translation |
| T | 1990904 | cellular_component | ribonucleoprotein complex |
| U | 0003735 | molecular_function | structural constituent of ribosome |
| U | 0005739 | cellular_component | mitochondrion |
| U | 0005840 | cellular_component | ribosome |
| U | 0006412 | biological_process | translation |
| U | 0015934 | cellular_component | large ribosomal subunit |
| U | 1990904 | cellular_component | ribonucleoprotein complex |
| V | 0003735 | molecular_function | structural constituent of ribosome |
| V | 0005739 | cellular_component | mitochondrion |
| V | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| V | 0032543 | biological_process | mitochondrial translation |
| W | 0003735 | molecular_function | structural constituent of ribosome |
| W | 0005739 | cellular_component | mitochondrion |
| W | 0005762 | cellular_component | mitochondrial large ribosomal subunit |
| W | 0005840 | cellular_component | ribosome |
| W | 0006412 | biological_process | translation |
| W | 0015934 | cellular_component | large ribosomal subunit |
| W | 0046872 | molecular_function | metal ion binding |
| W | 1990904 | cellular_component | ribonucleoprotein complex |
| X | 0003735 | molecular_function | structural constituent of ribosome |
| X | 0005739 | cellular_component | mitochondrion |
| X | 0005840 | cellular_component | ribosome |
| X | 0006412 | biological_process | translation |
| X | 1990904 | cellular_component | ribonucleoprotein complex |
| Y | 0003735 | molecular_function | structural constituent of ribosome |
| Y | 0005840 | cellular_component | ribosome |
| Y | 0006412 | biological_process | translation |
| Y | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3501 |
| Chain | Residue |
| A | U603 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3503 |
| Chain | Residue |
| A | A367 |
| A | A368 |
| A | U369 |
| site_id | AC3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3504 |
| Chain | Residue |
| A | A552 |
| site_id | AC4 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3505 |
| Chain | Residue |
| A | U2246 |
| site_id | AC5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3506 |
| Chain | Residue |
| A | U2286 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3509 |
| Chain | Residue |
| A | G2253 |
| A | G614 |
| A | U2252 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 3510 |
| Chain | Residue |
| A | U1009 |
| A | A1010 |
| A | G2881 |
| A | A2882 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3512 |
| Chain | Residue |
| A | C1906 |
| A | U1907 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3514 |
| Chain | Residue |
| A | U3045 |
| site_id | AD1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3516 |
| Chain | Residue |
| A | C1645 |
| site_id | AD2 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3517 |
| Chain | Residue |
| A | G3170 |
| A | U3171 |
| A | G3284 |
| site_id | AD3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3518 |
| Chain | Residue |
| A | G969 |
| A | A3040 |
| site_id | AD4 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3519 |
| Chain | Residue |
| A | A968 |
| A | G969 |
| A | U3041 |
| site_id | AD5 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3520 |
| Chain | Residue |
| A | A1220 |
| A | G1221 |
| site_id | AD6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3521 |
| Chain | Residue |
| A | A2470 |
| A | G2471 |
| site_id | AD7 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3522 |
| Chain | Residue |
| A | A2472 |
| site_id | AD8 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3523 |
| Chain | Residue |
| A | A1542 |
| A | A2240 |
| site_id | AD9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3524 |
| Chain | Residue |
| A | A1541 |
| A | C2241 |
| site_id | AE1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3525 |
| Chain | Residue |
| A | A1538 |
| A | U3067 |
| site_id | AE2 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3526 |
| Chain | Residue |
| A | A621 |
| site_id | AE3 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 3527 |
| Chain | Residue |
| A | A1905 |
| A | C1906 |
| A | U1907 |
| A | A3002 |
| site_id | AE4 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3528 |
| Chain | Residue |
| A | G923 |
| site_id | AE5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3529 |
| Chain | Residue |
| A | C1851 |
| site_id | AE6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3530 |
| Chain | Residue |
| A | C1616 |
| site_id | AE7 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 3531 |
| Chain | Residue |
| A | C3165 |
| A | U3168 |
| A | G3169 |
| A | U3286 |
| site_id | AE8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3532 |
| Chain | Residue |
| A | G2060 |
| site_id | AE9 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3533 |
| Chain | Residue |
| A | G2060 |
| site_id | AF1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3534 |
| Chain | Residue |
| A | U925 |
| site_id | AF2 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3535 |
| Chain | Residue |
| A | U924 |
| A | U2012 |
| A | A2013 |
| site_id | AF3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3536 |
| Chain | Residue |
| A | C2003 |
| site_id | AF4 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3538 |
| Chain | Residue |
| A | G944 |
| site_id | AF5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3539 |
| Chain | Residue |
| A | G2005 |
| site_id | AF6 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3540 |
| Chain | Residue |
| A | U914 |
| A | C915 |
| A | A945 |
| site_id | AF7 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3541 |
| Chain | Residue |
| A | A2061 |
| A | U2062 |
| site_id | AF8 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3542 |
| Chain | Residue |
| A | C1587 |
| A | U1588 |
| A | G1873 |
| site_id | AF9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3543 |
| Chain | Residue |
| A | G1001 |
| A | G1458 |
| site_id | AG1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3544 |
| Chain | Residue |
| A | G1458 |
| site_id | AG2 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 3545 |
| Chain | Residue |
| A | A1235 |
| A | A1236 |
| A | G1456 |
| A | G1457 |
| site_id | AG3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3547 |
| Chain | Residue |
| A | A1254 |
| A | A1255 |
| site_id | AG4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3548 |
| Chain | Residue |
| A | A1404 |
| A | C1405 |
| site_id | AG5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3549 |
| Chain | Residue |
| A | A497 |
| site_id | AG6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3550 |
| Chain | Residue |
| A | A448 |
| A | A497 |
| site_id | AG7 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3551 |
| Chain | Residue |
| A | G2639 |
| A | U2787 |
| A | C2838 |
| site_id | AG8 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 3552 |
| Chain | Residue |
| A | G988 |
| A | A1013 |
| A | G1014 |
| A | U2303 |
| site_id | AG9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3553 |
| Chain | Residue |
| A | A1460 |
| A | G1461 |
| site_id | AH1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3554 |
| Chain | Residue |
| A | U1188 |
| site_id | AH2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3555 |
| Chain | Residue |
| A | A1527 |
| A | G1529 |
| site_id | AH3 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3556 |
| Chain | Residue |
| A | U3027 |
| A | G3028 |
| A | A3029 |
| site_id | AH4 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 3557 |
| Chain | Residue |
| A | A3066 |
| A | U2286 |
| A | A2287 |
| A | G2288 |
| A | A3029 |
| site_id | AH5 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3558 |
| Chain | Residue |
| A | U2263 |
| A | G2264 |
| A | A2268 |
| site_id | AH6 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3559 |
| Chain | Residue |
| A | C1193 |
| A | G1207 |
| A | U1208 |
| site_id | AH7 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3560 |
| Chain | Residue |
| A | G1267 |
| A | U1268 |
| A | G1269 |
| site_id | AH8 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3561 |
| Chain | Residue |
| A | A3091 |
| A | U3092 |
| site_id | AH9 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3562 |
| Chain | Residue |
| A | C570 |
| A | A2270 |
| A | C2271 |
| site_id | AI1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3563 |
| Chain | Residue |
| A | A565 |
| A | U566 |
| site_id | AI2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3564 |
| Chain | Residue |
| A | A3273 |
| A | G3276 |
| site_id | AI3 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 3565 |
| Chain | Residue |
| A | U1009 |
| A | U2879 |
| A | G2880 |
| A | G2881 |
| site_id | AI4 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3566 |
| Chain | Residue |
| A | A3039 |
| site_id | AI5 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3567 |
| Chain | Residue |
| A | A1869 |
| A | U1870 |
| site_id | AI6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3568 |
| Chain | Residue |
| A | C332 |
| A | A335 |
| site_id | AI7 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3569 |
| Chain | Residue |
| A | G917 |
| A | A945 |
| site_id | AI8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3570 |
| Chain | Residue |
| A | A1004 |
| site_id | AI9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3571 |
| Chain | Residue |
| A | A1607 |
| A | U1835 |
| site_id | AJ1 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3572 |
| Chain | Residue |
| A | A1647 |
| A | U1648 |
| A | G1649 |
| site_id | AJ2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3573 |
| Chain | Residue |
| A | U1597 |
| A | G1598 |
| site_id | AJ3 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3574 |
| Chain | Residue |
| A | A934 |
| A | A935 |
| A | A1848 |
| site_id | AJ4 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3575 |
| Chain | Residue |
| A | U927 |
| A | A1894 |
| A | U1895 |
| site_id | AJ5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3576 |
| Chain | Residue |
| A | A1900 |
| site_id | AJ6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3577 |
| Chain | Residue |
| A | A1900 |
| A | A1901 |
| site_id | AJ7 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3578 |
| Chain | Residue |
| A | C1911 |
| A | A1912 |
| site_id | AJ8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3579 |
| Chain | Residue |
| A | C2087 |
| site_id | AJ9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3580 |
| Chain | Residue |
| A | A2136 |
| A | A2205 |
| site_id | AK1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3581 |
| Chain | Residue |
| A | A2205 |
| A | U2206 |
| site_id | AK2 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3582 |
| Chain | Residue |
| A | U2232 |
| site_id | AK3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3583 |
| Chain | Residue |
| A | U2309 |
| A | A2441 |
| site_id | AK4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3584 |
| Chain | Residue |
| A | A486 |
| A | A2859 |
| site_id | AK5 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 3585 |
| Chain | Residue |
| A | C2958 |
| A | C3025 |
| A | A3026 |
| A | U3027 |
| site_id | AK6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3586 |
| Chain | Residue |
| A | U3166 |
| A | A3283 |
| site_id | AK7 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3587 |
| Chain | Residue |
| A | A3328 |
| A | U3329 |
| site_id | AK8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3588 |
| Chain | Residue |
| A | G3380 |
| site_id | AK9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3589 |
| Chain | Residue |
| A | U612 |
| A | G613 |
| site_id | AL1 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3590 |
| Chain | Residue |
| A | G1592 |
| A | U1839 |
| A | A1842 |
| site_id | AL2 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3591 |
| Chain | Residue |
| A | A2009 |
| A | U2011 |
| A | U2012 |
| site_id | AL3 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 3592 |
| Chain | Residue |
| A | A2018 |
| A | A2019 |
| A | G2060 |
| B | THR316 |
| B | ARG318 |
| site_id | AL4 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3593 |
| Chain | Residue |
| A | C3175 |
| site_id | AL5 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3594 |
| Chain | Residue |
| A | G1609 |
| A | G1614 |
| A | G1615 |
| site_id | AL6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3595 |
| Chain | Residue |
| A | A2034 |
| site_id | AL7 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 3596 |
| Chain | Residue |
| A | A970 |
| A | C971 |
| A | C976 |
| A | U977 |
| site_id | AL8 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3597 |
| Chain | Residue |
| A | U863 |
| A | C1518 |
| A | A1519 |
| site_id | AL9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3598 |
| Chain | Residue |
| A | U953 |
| A | G954 |
| site_id | AM1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3599 |
| Chain | Residue |
| A | G2056 |
| B | HIS117 |
| site_id | AM2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3600 |
| Chain | Residue |
| A | A3310 |
| A | U3316 |
| site_id | AM3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3601 |
| Chain | Residue |
| A | G3309 |
| A | A3317 |
| site_id | AM4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3602 |
| Chain | Residue |
| A | A328 |
| Q | PHE283 |
| site_id | AM5 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3603 |
| Chain | Residue |
| A | A415 |
| A | G416 |
| site_id | AM6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3604 |
| Chain | Residue |
| A | A465 |
| site_id | AM7 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 3605 |
| Chain | Residue |
| A | A452 |
| A | A453 |
| A | A465 |
| A | G466 |
| site_id | AM8 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3606 |
| Chain | Residue |
| A | A335 |
| A | G336 |
| site_id | AM9 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3607 |
| Chain | Residue |
| A | G524 |
| site_id | AN1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3608 |
| Chain | Residue |
| A | G524 |
| A | A527 |
| site_id | AN2 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3609 |
| Chain | Residue |
| A | A972 |
| A | C974 |
| A | A975 |
| site_id | AN3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3610 |
| Chain | Residue |
| A | C1382 |
| A | G1384 |
| site_id | AN4 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 3611 |
| Chain | Residue |
| A | G2640 |
| A | U2641 |
| A | U2790 |
| A | G2791 |
| site_id | AN5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3612 |
| Chain | Residue |
| A | A2325 |
| site_id | AN6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3613 |
| Chain | Residue |
| A | G2425 |
| site_id | AN7 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3614 |
| Chain | Residue |
| A | U3069 |
| C | SER261 |
| site_id | AN8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3615 |
| Chain | Residue |
| A | A3365 |
| site_id | AN9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3617 |
| Chain | Residue |
| A | U3067 |
| A | C3068 |
| site_id | AO1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3618 |
| Chain | Residue |
| A | C2260 |
| site_id | AO2 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3619 |
| Chain | Residue |
| A | A2808 |
| A | C2809 |
| A | A2811 |
| site_id | AO3 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 3620 |
| Chain | Residue |
| A | A1186 |
| A | G1461 |
| A | C1462 |
| J | GLY79 |
| site_id | AO4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3621 |
| Chain | Residue |
| A | A866 |
| A | C1462 |
| site_id | AO5 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3622 |
| Chain | Residue |
| A | A3362 |
| L | HIS5 |
| site_id | AO6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3625 |
| Chain | Residue |
| A | A312 |
| site_id | AO7 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3627 |
| Chain | Residue |
| A | G2460 |
| site_id | AO8 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3628 |
| Chain | Residue |
| A | A105 |
| site_id | AO9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3629 |
| Chain | Residue |
| A | U930 |
| A | C3064 |
| site_id | AP1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3630 |
| Chain | Residue |
| A | U888 |
| A | C889 |
| site_id | AP2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3631 |
| Chain | Residue |
| A | U888 |
| A | C889 |
| site_id | AP3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3632 |
| Chain | Residue |
| A | U410 |
| A | G411 |
| site_id | AP4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3633 |
| Chain | Residue |
| A | A452 |
| A | A453 |
| site_id | AP5 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3634 |
| Chain | Residue |
| A | A2858 |
| site_id | AP6 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3635 |
| Chain | Residue |
| A | A521 |
| site_id | AP7 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 3637 |
| Chain | Residue |
| A | A622 |
| A | U994 |
| A | U1522 |
| A | G1523 |
| J | ARG68 |
| site_id | AP8 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3638 |
| Chain | Residue |
| A | C1160 |
| A | G1161 |
| site_id | AP9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3639 |
| Chain | Residue |
| A | G2264 |
| c | GLY14 |
| site_id | AQ1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3640 |
| Chain | Residue |
| A | A1316 |
| A | C1318 |
| site_id | AQ2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3641 |
| Chain | Residue |
| A | A1319 |
| A | U1340 |
| site_id | AQ3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3642 |
| Chain | Residue |
| A | G2978 |
| site_id | AQ4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3643 |
| Chain | Residue |
| A | G1242 |
| A | C1400 |
| site_id | AQ5 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3644 |
| Chain | Residue |
| A | G1558 |
| A | G1559 |
| A | U1573 |
| site_id | AQ6 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3645 |
| Chain | Residue |
| A | A1463 |
| A | G1464 |
| site_id | AQ7 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3646 |
| Chain | Residue |
| A | U1487 |
| A | U1488 |
| A | A1503 |
| site_id | AQ8 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3647 |
| Chain | Residue |
| A | A1836 |
| A | C1837 |
| site_id | AQ9 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3648 |
| Chain | Residue |
| A | G1841 |
| site_id | AR1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3649 |
| Chain | Residue |
| A | A1549 |
| A | U1880 |
| site_id | AR2 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3650 |
| Chain | Residue |
| A | U2084 |
| A | G2124 |
| site_id | AR3 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 3651 |
| Chain | Residue |
| A | U2649 |
| site_id | AR4 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3652 |
| Chain | Residue |
| A | A2658 |
| A | G2659 |
| site_id | AR5 |
| Number of Residues | 6 |
| Details | binding site for residue MG A 3653 |
| Chain | Residue |
| A | G3124 |
| A | G3293 |
| A | U3294 |
| A | C3295 |
| A | A3296 |
| C | ASN282 |
| site_id | AR6 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3654 |
| Chain | Residue |
| 0 | LYS98 |
| A | G3304 |
| A | U3305 |
| site_id | AR7 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3655 |
| Chain | Residue |
| A | C3334 |
| A | U3335 |
| site_id | AR8 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3656 |
| Chain | Residue |
| A | U3386 |
| A | U3387 |
| M | LYS128 |
| site_id | AR9 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3657 |
| Chain | Residue |
| A | A3436 |
| A | C3437 |
| site_id | AS1 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 3658 |
| Chain | Residue |
| A | A1978 |
| A | G1979 |
| site_id | AS2 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 3659 |
| Chain | Residue |
| A | A2898 |
| A | C2949 |
| A | C2950 |
| site_id | AS3 |
| Number of Residues | 6 |
| Details | binding site for residue SPM A 3661 |
| Chain | Residue |
| A | A1270 |
| A | A1271 |
| A | C1382 |
| A | G1383 |
| A | G1384 |
| A | U1392 |
| site_id | AS4 |
| Number of Residues | 4 |
| Details | binding site for residue K A 3662 |
| Chain | Residue |
| A | U1633 |
| A | G1634 |
| A | A1635 |
| S | GLN90 |
| site_id | AS5 |
| Number of Residues | 4 |
| Details | binding site for residue K A 3663 |
| Chain | Residue |
| A | U1633 |
| A | A1635 |
| A | A1636 |
| A | G1637 |
| site_id | AS6 |
| Number of Residues | 1 |
| Details | binding site for residue K A 3665 |
| Chain | Residue |
| A | G830 |
| site_id | AS7 |
| Number of Residues | 1 |
| Details | binding site for residue K A 3666 |
| Chain | Residue |
| A | G984 |
| site_id | AS8 |
| Number of Residues | 1 |
| Details | binding site for residue K A 3667 |
| Chain | Residue |
| A | G2124 |
| site_id | AS9 |
| Number of Residues | 4 |
| Details | binding site for residue K A 3668 |
| Chain | Residue |
| A | C2070 |
| A | U2073 |
| A | G2074 |
| A | U2134 |
| site_id | AT1 |
| Number of Residues | 4 |
| Details | binding site for residue K A 3669 |
| Chain | Residue |
| A | C2069 |
| A | C2070 |
| A | G2071 |
| A | U2135 |
| site_id | AT2 |
| Number of Residues | 1 |
| Details | binding site for residue K A 3670 |
| Chain | Residue |
| A | G2071 |
| site_id | AT3 |
| Number of Residues | 3 |
| Details | binding site for residue K A 3671 |
| Chain | Residue |
| A | U2166 |
| A | G2168 |
| A | U2202 |
| site_id | AT4 |
| Number of Residues | 1 |
| Details | binding site for residue K A 3672 |
| Chain | Residue |
| A | A3300 |
| site_id | AT5 |
| Number of Residues | 2 |
| Details | binding site for residue K A 3673 |
| Chain | Residue |
| A | U3345 |
| A | C3346 |
| site_id | AT6 |
| Number of Residues | 5 |
| Details | binding site for residue MG K 301 |
| Chain | Residue |
| A | G2936 |
| K | GLY190 |
| K | HIS191 |
| K | LEU193 |
| K | GLY195 |
| site_id | AT7 |
| Number of Residues | 4 |
| Details | binding site for residue ZN W 201 |
| Chain | Residue |
| W | CYS94 |
| W | CYS97 |
| W | CYS107 |
| W | CYS110 |
| site_id | AT8 |
| Number of Residues | 4 |
| Details | binding site for residue ZN 0 201 |
| Chain | Residue |
| 0 | CYS89 |
| 0 | CYS92 |
| 0 | CYS111 |
| 0 | HIS117 |
| site_id | AT9 |
| Number of Residues | 18 |
| Details | binding site for residue NAD 2 4301 |
| Chain | Residue |
| 2 | TRP287 |
| 2 | ARG291 |
| 2 | ARG295 |
| 2 | ARG298 |
| 2 | GLU299 |
| 2 | MG4302 |
| 6 | GLU108 |
| 6 | TYR112 |
| A | A2755 |
| A | G2757 |
| A | U2759 |
| A | U2760 |
| E | PRO119 |
| E | ASN121 |
| E | MET122 |
| E | LYS126 |
| E | ARG130 |
| E | ASN260 |
| site_id | AU1 |
| Number of Residues | 3 |
| Details | binding site for residue MG 2 4302 |
| Chain | Residue |
| 2 | ARG291 |
| 2 | ARG298 |
| 2 | NAD4301 |
| site_id | AU2 |
| Number of Residues | 2 |
| Details | binding site for residue MG 3 201 |
| Chain | Residue |
| 3 | LYS20 |
| A | G1599 |
Functional Information from PROSITE/UniProt
| site_id | PS00049 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkqkvqrr.DGsvvrFddNacVL |
| Chain | Residue | Details |
| I | ALA69-LEU95 |
| site_id | PS00525 |
| Number of Residues | 9 |
| Details | RIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGI |
| Chain | Residue | Details |
| F | PRO232-ILE240 |
| site_id | PS00634 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_L30 Ribosomal protein L30 signature. VLaaLgLrRrnQtVfhpvepqfagMLmkVkeLV |
| Chain | Residue | Details |
| U | VAL22-VAL54 |
| site_id | PS00701 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGsfdhW |
| Chain | Residue | Details |
| K | ARG149-TRP160 |
| site_id | PS01167 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_L17 Ribosomal protein L17 signature. IhTTypKaKeaqrlaEkLITlSK |
| Chain | Residue | Details |
| L | ILE35-LYS57 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000250|UniProtKB:P25348 |
| Chain | Residue | Details |
| W | CYS94 | |
| W | CYS97 | |
| W | CYS107 | |
| W | CYS110 |
