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6YPA

The C146A variant of an amidase from Pyrococcus horikoshii with bound glutaramide

Functional Information from GO Data
ChainGOidnamespacecontents
A0003837molecular_functionbeta-ureidopropionase activity
A0006807biological_processobsolete nitrogen compound metabolic process
A0016787molecular_functionhydrolase activity
A0033388biological_processputrescine biosynthetic process from arginine
A0033396biological_processbeta-alanine biosynthetic process via 3-ureidopropionate
A0050126molecular_functionN-carbamoylputrescine amidase activity
B0003837molecular_functionbeta-ureidopropionase activity
B0006807biological_processobsolete nitrogen compound metabolic process
B0016787molecular_functionhydrolase activity
B0033388biological_processputrescine biosynthetic process from arginine
B0033396biological_processbeta-alanine biosynthetic process via 3-ureidopropionate
B0050126molecular_functionN-carbamoylputrescine amidase activity
C0003837molecular_functionbeta-ureidopropionase activity
C0006807biological_processobsolete nitrogen compound metabolic process
C0016787molecular_functionhydrolase activity
C0033388biological_processputrescine biosynthetic process from arginine
C0033396biological_processbeta-alanine biosynthetic process via 3-ureidopropionate
C0050126molecular_functionN-carbamoylputrescine amidase activity
D0003837molecular_functionbeta-ureidopropionase activity
D0006807biological_processobsolete nitrogen compound metabolic process
D0016787molecular_functionhydrolase activity
D0033388biological_processputrescine biosynthetic process from arginine
D0033396biological_processbeta-alanine biosynthetic process via 3-ureidopropionate
D0050126molecular_functionN-carbamoylputrescine amidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue P6W A 301
ChainResidue
AGLU42
ALEU172
AVAL173
AMET174
AHOH407
ATYR48
ALYS113
APHE117
AGLU120
AALA146
APHE147
ATRP149
AASN171

site_idAC2
Number of Residues9
Detailsbinding site for residue GOL A 302
ChainResidue
APRO178
AARG179
ALYS209
AVAL219
AILE222
AHOH418
AHOH429
DTHR226
DGLU227

site_idAC3
Number of Residues13
Detailsbinding site for residue P6W B 301
ChainResidue
BGLU42
BTYR48
BLYS113
BPHE117
BGLU120
BALA146
BPHE147
BTRP149
BASN171
BLEU172
BVAL173
BMET174
BHOH407

site_idAC4
Number of Residues12
Detailsbinding site for residue P6W C 301
ChainResidue
CGLU42
CLYS113
CPHE117
CGLU120
CALA146
CPHE147
CTRP149
CASN171
CLEU172
CVAL173
CMET174
CHOH415

site_idAC5
Number of Residues13
Detailsbinding site for residue P6W D 301
ChainResidue
DGLU42
DTYR48
DLYS113
DPHE117
DGLU120
DALA146
DPHE147
DTRP149
DASN171
DLEU172
DVAL173
DMET174
DHOH511

219869

PDB entries from 2024-05-15

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