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6YGD

Crystal structure of the NatC complex bound to Gag peptide and CoA

Functional Information from GO Data
ChainGOidnamespacecontents
A0004596molecular_functionpeptide alpha-N-acetyltransferase activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0016746molecular_functionacyltransferase activity
A0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
A0017196biological_processN-terminal peptidyl-methionine acetylation
A0031417cellular_componentNatC complex
A0032880biological_processregulation of protein localization
B0004596molecular_functionpeptide alpha-N-acetyltransferase activity
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0016236biological_processmacroautophagy
B0017196biological_processN-terminal peptidyl-methionine acetylation
B0031417cellular_componentNatC complex
C0003723molecular_functionRNA binding
C0031417cellular_componentNatC complex
Functional Information from PDB Data
site_idAC1
Number of Residues17
Detailsbinding site for residue COA A 201
ChainResidue
ALEU27
ALYS97
AASN123
AALA125
AALA126
AASN128
ALEU129
ATYR130
DMET1
ALEU84
AVAL86
AARG91
AGLY92
AHIS93
AGLY94
AILE95
AALA96

site_idAC2
Number of Residues3
Detailsbinding site for residue IOD B 801
ChainResidue
AARG140
BARG408
BGLN409

site_idAC3
Number of Residues1
Detailsbinding site for residue IOD B 804
ChainResidue
BTHR107

site_idAC4
Number of Residues1
Detailsbinding site for residue IOD B 805
ChainResidue
BLYS681

site_idAC5
Number of Residues1
Detailsbinding site for residue IOD B 807
ChainResidue
BTHR628

site_idAC6
Number of Residues2
Detailsbinding site for residue CL B 811
ChainResidue
BTRP396
BSER444

site_idAC7
Number of Residues5
Detailsbinding site for residue EDO B 814
ChainResidue
BGLU542
BTHR546
BTYR672
BLEU676
BPHE720

site_idAC8
Number of Residues5
Detailsbinding site for residue EDO B 815
ChainResidue
AGLU2
ALYS54
BASN655
BVAL657
BHOH913

site_idAC9
Number of Residues1
Detailsbinding site for residue EDO B 816
ChainResidue
BASN692

site_idAD1
Number of Residues6
Detailsbinding site for residue EDO B 817
ChainResidue
BARG93
BPRO266
BPRO267
BGLY269
BALA270
BPHE271

site_idAD2
Number of Residues4
Detailsbinding site for residue EDO B 818
ChainResidue
BASN544
BSER548
BGLU634
BSER641

site_idAD3
Number of Residues1
Detailsbinding site for residue IOD C 101
ChainResidue
BGLN282

site_idAD4
Number of Residues3
Detailsbinding site for residue IOD C 102
ChainResidue
CLYS5
CLEU6
CSER7

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: N-acetylmethionine; by host N-acetyltransferase MAK3 => ECO:0000269|PubMed:1400344
ChainResidueDetails
DMET1

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PDB entries from 2024-07-24

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