6YAL
Mammalian 48S late-stage initiation complex with beta-globin mRNA
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0003723 | molecular_function | RNA binding |
| A | 0003743 | molecular_function | translation initiation factor activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005850 | cellular_component | eukaryotic translation initiation factor 2 complex |
| A | 0006412 | biological_process | translation |
| A | 0006413 | biological_process | translational initiation |
| A | 0010494 | cellular_component | cytoplasmic stress granule |
| A | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
| A | 0034976 | biological_process | response to endoplasmic reticulum stress |
| A | 0043022 | molecular_function | ribosome binding |
| A | 0062197 | biological_process | cellular response to chemical stress |
| B | 0000049 | molecular_function | tRNA binding |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0001731 | biological_process | formation of translation preinitiation complex |
| B | 0003743 | molecular_function | translation initiation factor activity |
| B | 0003924 | molecular_function | GTPase activity |
| B | 0005525 | molecular_function | GTP binding |
| B | 0005829 | cellular_component | cytosol |
| B | 0005850 | cellular_component | eukaryotic translation initiation factor 2 complex |
| B | 0006412 | biological_process | translation |
| B | 0006413 | biological_process | translational initiation |
| B | 0016787 | molecular_function | hydrolase activity |
| C | 0003735 | molecular_function | structural constituent of ribosome |
| C | 0005840 | cellular_component | ribosome |
| C | 0006412 | biological_process | translation |
| C | 0015935 | cellular_component | small ribosomal subunit |
| D | 0003735 | molecular_function | structural constituent of ribosome |
| D | 0005634 | cellular_component | nucleus |
| D | 0005730 | cellular_component | nucleolus |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005840 | cellular_component | ribosome |
| D | 0006412 | biological_process | translation |
| D | 0022626 | cellular_component | cytosolic ribosome |
| D | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| D | 0030154 | biological_process | cell differentiation |
| D | 1990904 | cellular_component | ribonucleoprotein complex |
| E | 0003723 | molecular_function | RNA binding |
| E | 0003735 | molecular_function | structural constituent of ribosome |
| E | 0005840 | cellular_component | ribosome |
| E | 0006412 | biological_process | translation |
| E | 0015935 | cellular_component | small ribosomal subunit |
| F | 0003677 | molecular_function | DNA binding |
| F | 0003723 | molecular_function | RNA binding |
| F | 0003735 | molecular_function | structural constituent of ribosome |
| F | 0005634 | cellular_component | nucleus |
| F | 0005730 | cellular_component | nucleolus |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0005743 | cellular_component | mitochondrial inner membrane |
| F | 0005819 | cellular_component | spindle |
| F | 0005840 | cellular_component | ribosome |
| F | 0006281 | biological_process | DNA repair |
| F | 0006412 | biological_process | translation |
| F | 0006417 | biological_process | regulation of translation |
| F | 0006915 | biological_process | apoptotic process |
| F | 0006974 | biological_process | DNA damage response |
| F | 0015935 | cellular_component | small ribosomal subunit |
| F | 0016829 | molecular_function | lyase activity |
| F | 0022626 | cellular_component | cytosolic ribosome |
| F | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| F | 0051301 | biological_process | cell division |
| F | 0140078 | molecular_function | class I DNA-(apurinic or apyrimidinic site) endonuclease activity |
| F | 1990904 | cellular_component | ribonucleoprotein complex |
| F | 2001235 | biological_process | positive regulation of apoptotic signaling pathway |
| G | 0003723 | molecular_function | RNA binding |
| G | 0003735 | molecular_function | structural constituent of ribosome |
| G | 0005730 | cellular_component | nucleolus |
| G | 0005737 | cellular_component | cytoplasm |
| G | 0005840 | cellular_component | ribosome |
| G | 0006412 | biological_process | translation |
| G | 0019843 | molecular_function | rRNA binding |
| G | 0022626 | cellular_component | cytosolic ribosome |
| G | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| G | 1990904 | cellular_component | ribonucleoprotein complex |
| H | 0003723 | molecular_function | RNA binding |
| H | 0003735 | molecular_function | structural constituent of ribosome |
| H | 0006412 | biological_process | translation |
| H | 0015935 | cellular_component | small ribosomal subunit |
| I | 0003735 | molecular_function | structural constituent of ribosome |
| I | 0005840 | cellular_component | ribosome |
| I | 0006412 | biological_process | translation |
| I | 1990904 | cellular_component | ribonucleoprotein complex |
| J | 0003735 | molecular_function | structural constituent of ribosome |
| J | 0005730 | cellular_component | nucleolus |
| J | 0005737 | cellular_component | cytoplasm |
| J | 0005813 | cellular_component | centrosome |
| J | 0005840 | cellular_component | ribosome |
| J | 0006364 | biological_process | rRNA processing |
| J | 0006412 | biological_process | translation |
| J | 0022626 | cellular_component | cytosolic ribosome |
| J | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| J | 0030686 | cellular_component | 90S preribosome |
| J | 0032040 | cellular_component | small-subunit processome |
| J | 0042274 | biological_process | ribosomal small subunit biogenesis |
| J | 1990904 | cellular_component | ribonucleoprotein complex |
| K | 0003735 | molecular_function | structural constituent of ribosome |
| K | 0005730 | cellular_component | nucleolus |
| K | 0005737 | cellular_component | cytoplasm |
| K | 0005840 | cellular_component | ribosome |
| K | 0006412 | biological_process | translation |
| K | 0016020 | cellular_component | membrane |
| K | 0022626 | cellular_component | cytosolic ribosome |
| K | 1990904 | cellular_component | ribonucleoprotein complex |
| L | 0003723 | molecular_function | RNA binding |
| L | 0003735 | molecular_function | structural constituent of ribosome |
| L | 0005730 | cellular_component | nucleolus |
| L | 0005737 | cellular_component | cytoplasm |
| L | 0005840 | cellular_component | ribosome |
| L | 0006412 | biological_process | translation |
| L | 0015935 | cellular_component | small ribosomal subunit |
| L | 0019843 | molecular_function | rRNA binding |
| L | 0022626 | cellular_component | cytosolic ribosome |
| L | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| L | 0042274 | biological_process | ribosomal small subunit biogenesis |
| L | 1990904 | cellular_component | ribonucleoprotein complex |
| N | 0003723 | molecular_function | RNA binding |
| N | 0003735 | molecular_function | structural constituent of ribosome |
| N | 0005730 | cellular_component | nucleolus |
| N | 0005737 | cellular_component | cytoplasm |
| N | 0005840 | cellular_component | ribosome |
| N | 0006412 | biological_process | translation |
| N | 0019843 | molecular_function | rRNA binding |
| N | 0022626 | cellular_component | cytosolic ribosome |
| N | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| N | 1990904 | cellular_component | ribonucleoprotein complex |
| O | 0003735 | molecular_function | structural constituent of ribosome |
| O | 0005730 | cellular_component | nucleolus |
| O | 0005737 | cellular_component | cytoplasm |
| O | 0005794 | cellular_component | Golgi apparatus |
| O | 0005829 | cellular_component | cytosol |
| O | 0005840 | cellular_component | ribosome |
| O | 0006412 | biological_process | translation |
| O | 0022626 | cellular_component | cytosolic ribosome |
| O | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| O | 0032040 | cellular_component | small-subunit processome |
| O | 0042274 | biological_process | ribosomal small subunit biogenesis |
| O | 0090263 | biological_process | positive regulation of canonical Wnt signaling pathway |
| O | 1990904 | cellular_component | ribonucleoprotein complex |
| P | 0003735 | molecular_function | structural constituent of ribosome |
| P | 0005730 | cellular_component | nucleolus |
| P | 0005737 | cellular_component | cytoplasm |
| P | 0005840 | cellular_component | ribosome |
| P | 0006412 | biological_process | translation |
| P | 0022626 | cellular_component | cytosolic ribosome |
| P | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| P | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| P | 1990904 | cellular_component | ribonucleoprotein complex |
| Q | 0003735 | molecular_function | structural constituent of ribosome |
| Q | 0005730 | cellular_component | nucleolus |
| Q | 0005737 | cellular_component | cytoplasm |
| Q | 0005840 | cellular_component | ribosome |
| Q | 0006412 | biological_process | translation |
| Q | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| Q | 1990904 | cellular_component | ribonucleoprotein complex |
| R | 0000028 | biological_process | ribosomal small subunit assembly |
| R | 0000056 | biological_process | ribosomal small subunit export from nucleus |
| R | 0003723 | molecular_function | RNA binding |
| R | 0003735 | molecular_function | structural constituent of ribosome |
| R | 0005737 | cellular_component | cytoplasm |
| R | 0005840 | cellular_component | ribosome |
| R | 0006364 | biological_process | rRNA processing |
| R | 0006412 | biological_process | translation |
| R | 0015935 | cellular_component | small ribosomal subunit |
| R | 0022626 | cellular_component | cytosolic ribosome |
| R | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| R | 0042274 | biological_process | ribosomal small subunit biogenesis |
| R | 0097371 | molecular_function | MDM2/MDM4 family protein binding |
| R | 1901798 | biological_process | positive regulation of signal transduction by p53 class mediator |
| R | 1990904 | cellular_component | ribonucleoprotein complex |
| R | 1990948 | molecular_function | ubiquitin ligase inhibitor activity |
| S | 0000462 | biological_process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| S | 0003723 | molecular_function | RNA binding |
| S | 0003735 | molecular_function | structural constituent of ribosome |
| S | 0005730 | cellular_component | nucleolus |
| S | 0005737 | cellular_component | cytoplasm |
| S | 0005840 | cellular_component | ribosome |
| S | 0006412 | biological_process | translation |
| S | 0015935 | cellular_component | small ribosomal subunit |
| S | 0022626 | cellular_component | cytosolic ribosome |
| S | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| S | 1990904 | cellular_component | ribonucleoprotein complex |
| T | 0003735 | molecular_function | structural constituent of ribosome |
| T | 0005730 | cellular_component | nucleolus |
| T | 0005737 | cellular_component | cytoplasm |
| T | 0005840 | cellular_component | ribosome |
| T | 0006412 | biological_process | translation |
| T | 0022626 | cellular_component | cytosolic ribosome |
| T | 1990904 | cellular_component | ribonucleoprotein complex |
| U | 0003676 | molecular_function | nucleic acid binding |
| U | 0003723 | molecular_function | RNA binding |
| U | 0003735 | molecular_function | structural constituent of ribosome |
| U | 0005737 | cellular_component | cytoplasm |
| U | 0005829 | cellular_component | cytosol |
| U | 0005840 | cellular_component | ribosome |
| U | 0006412 | biological_process | translation |
| U | 0015935 | cellular_component | small ribosomal subunit |
| U | 0019843 | molecular_function | rRNA binding |
| U | 0022626 | cellular_component | cytosolic ribosome |
| U | 1990904 | cellular_component | ribonucleoprotein complex |
| V | 0000028 | biological_process | ribosomal small subunit assembly |
| V | 0003723 | molecular_function | RNA binding |
| V | 0003735 | molecular_function | structural constituent of ribosome |
| V | 0005730 | cellular_component | nucleolus |
| V | 0005737 | cellular_component | cytoplasm |
| V | 0005840 | cellular_component | ribosome |
| V | 0006412 | biological_process | translation |
| V | 0022626 | cellular_component | cytosolic ribosome |
| V | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| V | 1990904 | cellular_component | ribonucleoprotein complex |
| W | 0003723 | molecular_function | RNA binding |
| W | 0003735 | molecular_function | structural constituent of ribosome |
| W | 0005737 | cellular_component | cytoplasm |
| W | 0005840 | cellular_component | ribosome |
| W | 0006412 | biological_process | translation |
| W | 0015935 | cellular_component | small ribosomal subunit |
| W | 0022626 | cellular_component | cytosolic ribosome |
| W | 1990904 | cellular_component | ribonucleoprotein complex |
| X | 0003735 | molecular_function | structural constituent of ribosome |
| X | 0005737 | cellular_component | cytoplasm |
| X | 0005791 | cellular_component | rough endoplasmic reticulum |
| X | 0005829 | cellular_component | cytosol |
| X | 0005840 | cellular_component | ribosome |
| X | 0006412 | biological_process | translation |
| X | 0022626 | cellular_component | cytosolic ribosome |
| X | 1990904 | cellular_component | ribonucleoprotein complex |
| Y | 0003735 | molecular_function | structural constituent of ribosome |
| Y | 0005730 | cellular_component | nucleolus |
| Y | 0005737 | cellular_component | cytoplasm |
| Y | 0005840 | cellular_component | ribosome |
| Y | 0006412 | biological_process | translation |
| Y | 0022626 | cellular_component | cytosolic ribosome |
| Y | 1990904 | cellular_component | ribonucleoprotein complex |
| Z | 0003735 | molecular_function | structural constituent of ribosome |
| Z | 0005730 | cellular_component | nucleolus |
| Z | 0005737 | cellular_component | cytoplasm |
| Z | 0005791 | cellular_component | rough endoplasmic reticulum |
| Z | 0005829 | cellular_component | cytosol |
| Z | 0005840 | cellular_component | ribosome |
| Z | 0006412 | biological_process | translation |
| Z | 0015935 | cellular_component | small ribosomal subunit |
| Z | 0022626 | cellular_component | cytosolic ribosome |
| Z | 1990904 | cellular_component | ribonucleoprotein complex |
| a | 0003735 | molecular_function | structural constituent of ribosome |
| a | 0005730 | cellular_component | nucleolus |
| a | 0005737 | cellular_component | cytoplasm |
| a | 0005840 | cellular_component | ribosome |
| a | 0006412 | biological_process | translation |
| a | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| a | 1990904 | cellular_component | ribonucleoprotein complex |
| b | 0003729 | molecular_function | mRNA binding |
| b | 0003735 | molecular_function | structural constituent of ribosome |
| b | 0005737 | cellular_component | cytoplasm |
| b | 0005791 | cellular_component | rough endoplasmic reticulum |
| b | 0005829 | cellular_component | cytosol |
| b | 0005840 | cellular_component | ribosome |
| b | 0006412 | biological_process | translation |
| b | 0022626 | cellular_component | cytosolic ribosome |
| b | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| b | 1990904 | cellular_component | ribonucleoprotein complex |
| c | 0003735 | molecular_function | structural constituent of ribosome |
| c | 0005634 | cellular_component | nucleus |
| c | 0005730 | cellular_component | nucleolus |
| c | 0005737 | cellular_component | cytoplasm |
| c | 0005829 | cellular_component | cytosol |
| c | 0005840 | cellular_component | ribosome |
| c | 0006364 | biological_process | rRNA processing |
| c | 0006412 | biological_process | translation |
| c | 0008270 | molecular_function | zinc ion binding |
| c | 0014069 | cellular_component | postsynaptic density |
| c | 0022626 | cellular_component | cytosolic ribosome |
| c | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| c | 0032040 | cellular_component | small-subunit processome |
| c | 0042274 | biological_process | ribosomal small subunit biogenesis |
| c | 0046872 | molecular_function | metal ion binding |
| c | 1990904 | cellular_component | ribonucleoprotein complex |
| d | 0000028 | biological_process | ribosomal small subunit assembly |
| d | 0002181 | biological_process | cytoplasmic translation |
| d | 0003735 | molecular_function | structural constituent of ribosome |
| d | 0005730 | cellular_component | nucleolus |
| d | 0005737 | cellular_component | cytoplasm |
| d | 0005791 | cellular_component | rough endoplasmic reticulum |
| d | 0005829 | cellular_component | cytosol |
| d | 0005840 | cellular_component | ribosome |
| d | 0006364 | biological_process | rRNA processing |
| d | 0006412 | biological_process | translation |
| d | 0022626 | cellular_component | cytosolic ribosome |
| d | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| d | 0030490 | biological_process | maturation of SSU-rRNA |
| d | 0032040 | cellular_component | small-subunit processome |
| d | 0042254 | biological_process | ribosome biogenesis |
| d | 0042274 | biological_process | ribosomal small subunit biogenesis |
| d | 0045202 | cellular_component | synapse |
| d | 1990904 | cellular_component | ribonucleoprotein complex |
| e | 0002181 | biological_process | cytoplasmic translation |
| e | 0003735 | molecular_function | structural constituent of ribosome |
| e | 0005737 | cellular_component | cytoplasm |
| e | 0005791 | cellular_component | rough endoplasmic reticulum |
| e | 0005829 | cellular_component | cytosol |
| e | 0005840 | cellular_component | ribosome |
| e | 0006412 | biological_process | translation |
| e | 0008270 | molecular_function | zinc ion binding |
| e | 0022626 | cellular_component | cytosolic ribosome |
| e | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| e | 0046872 | molecular_function | metal ion binding |
| e | 1990904 | cellular_component | ribonucleoprotein complex |
| f | 0003735 | molecular_function | structural constituent of ribosome |
| f | 0005840 | cellular_component | ribosome |
| f | 0006412 | biological_process | translation |
| g | 0001891 | cellular_component | phagocytic cup |
| g | 0005634 | cellular_component | nucleus |
| g | 0005737 | cellular_component | cytoplasm |
| g | 0005840 | cellular_component | ribosome |
| g | 0005886 | cellular_component | plasma membrane |
| g | 0006417 | biological_process | regulation of translation |
| g | 0006915 | biological_process | apoptotic process |
| g | 0007369 | biological_process | gastrulation |
| g | 0015935 | cellular_component | small ribosomal subunit |
| g | 0030425 | cellular_component | dendrite |
| g | 0043022 | molecular_function | ribosome binding |
| g | 0043204 | cellular_component | perikaryon |
| g | 0045182 | molecular_function | translation regulator activity |
| g | 0048471 | cellular_component | perinuclear region of cytoplasm |
| g | 0048511 | biological_process | rhythmic process |
| g | 1990904 | cellular_component | ribonucleoprotein complex |
| i | 0003735 | molecular_function | structural constituent of ribosome |
| i | 0005634 | cellular_component | nucleus |
| i | 0005737 | cellular_component | cytoplasm |
| i | 0005829 | cellular_component | cytosol |
| i | 0005840 | cellular_component | ribosome |
| i | 0006412 | biological_process | translation |
| i | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| i | 1990904 | cellular_component | ribonucleoprotein complex |
| j | 0003723 | molecular_function | RNA binding |
| j | 0003743 | molecular_function | translation initiation factor activity |
| j | 0006413 | biological_process | translational initiation |
| k | 0000166 | molecular_function | nucleotide binding |
| k | 0005524 | molecular_function | ATP binding |
| k | 0005737 | cellular_component | cytoplasm |
| k | 0006412 | biological_process | translation |
| k | 0016887 | molecular_function | ATP hydrolysis activity |
| k | 0060255 | biological_process | regulation of macromolecule metabolic process |
| l | 0003735 | molecular_function | structural constituent of ribosome |
| l | 0005737 | cellular_component | cytoplasm |
| l | 0005840 | cellular_component | ribosome |
| l | 0006412 | biological_process | translation |
| l | 1990904 | cellular_component | ribonucleoprotein complex |
| n | 0003735 | molecular_function | structural constituent of ribosome |
| n | 0005634 | cellular_component | nucleus |
| n | 0005730 | cellular_component | nucleolus |
| n | 0005737 | cellular_component | cytoplasm |
| n | 0005840 | cellular_component | ribosome |
| n | 0006364 | biological_process | rRNA processing |
| n | 0014069 | cellular_component | postsynaptic density |
| n | 0022626 | cellular_component | cytosolic ribosome |
| n | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| n | 0042274 | biological_process | ribosomal small subunit biogenesis |
| n | 0045202 | cellular_component | synapse |
| n | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 8 |
| Details | binding site for residue SF4 k 701 |
| Chain | Residue |
| k | ALA9 |
| k | CYS29 |
| k | ILE39 |
| k | CYS55 |
| k | GLY57 |
| k | CYS58 |
| k | GLY59 |
| k | CYS61 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue SF4 k 702 |
| Chain | Residue |
| k | CYS21 |
| k | CYS25 |
| k | CYS65 |
| k | PHE67 |
| k | LEU70 |
| k | CYS16 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue MG k 703 |
| Chain | Residue |
| k | SER117 |
| k | GLN171 |
| k | GNP704 |
| site_id | AC4 |
| Number of Residues | 12 |
| Details | binding site for residue GNP k 704 |
| Chain | Residue |
| k | ASN112 |
| k | GLY113 |
| k | ILE114 |
| k | GLY115 |
| k | LYS116 |
| k | SER117 |
| k | THR118 |
| k | GLN171 |
| k | HIS274 |
| k | SER294 |
| k | SER463 |
| k | MG703 |
| site_id | AC5 |
| Number of Residues | 14 |
| Details | binding site for residue GNP k 705 |
| Chain | Residue |
| k | ARG212 |
| k | ASP216 |
| k | LEU217 |
| k | SER218 |
| k | GLU221 |
| k | MET357 |
| k | GLU359 |
| k | PHE360 |
| k | ASN381 |
| k | GLY382 |
| k | GLY384 |
| k | LYS385 |
| k | THR386 |
| k | HIS520 |
Functional Information from PROSITE/UniProt
| site_id | PS00052 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsMMmhgrnnGKKlmtvrIVkhA |
| Chain | Residue | Details |
| H | GLU70-ALA96 |
| site_id | PS00053 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_S8 Ribosomal protein S8 signature. GfiVLTTSaGIMdheeAR |
| Chain | Residue | Details |
| Y | GLY100-ARG117 |
| site_id | PS00054 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GMkIgrieDvTPiPSD |
| Chain | Residue | Details |
| Q | LEU116-ASP138 |
| site_id | PS00055 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR |
| Chain | Residue | Details |
| Z | LYS60-ARG67 |
| site_id | PS00056 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgEcRPLS |
| Chain | Residue | Details |
| N | GLY123-SER135 |
| site_id | PS00198 |
| Number of Residues | 12 |
| Details | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiGCGiCIkKCP |
| Chain | Residue | Details |
| k | CYS55-PRO66 |
| site_id | PS00211 |
| Number of Residues | 15 |
| Details | ABC_TRANSPORTER_1 ABC transporters family signature. LSGGELQRVALALCL |
| Chain | Residue | Details |
| k | LEU462-LEU476 |
| site_id | PS00299 |
| Number of Residues | 26 |
| Details | UBIQUITIN_1 Ubiquitin domain signature. KahVaSlegIApedQvVLLaGtpleD |
| Chain | Residue | Details |
| i | LYS25-ASP50 |
| site_id | PS00323 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKtfnqveIkpemIGhyLGEFsiT |
| Chain | Residue | Details |
| R | ASN98-THR122 |
| site_id | PS00360 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvAQiyAirqSiSKAL |
| Chain | Residue | Details |
| S | GLY74-LEU92 |
| site_id | PS00361 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_S10 Ribosomal protein S10 signature. AkekNLkvkGPVrMPT |
| Chain | Residue | Details |
| W | ALA43-THR58 |
| site_id | PS00362 |
| Number of Residues | 31 |
| Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY |
| Chain | Residue | Details |
| P | VAL98-TYR128 |
| site_id | PS00527 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S14 Ribosomal protein S14 signature. RvCsnrhglirkyg.LNMCRqCFR |
| Chain | Residue | Details |
| e | ARG22-ARG44 |
| site_id | PS00528 |
| Number of Residues | 15 |
| Details | RIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRVAaPkhWmLdK |
| Chain | Residue | Details |
| G | HIS8-LYS22 |
| site_id | PS00529 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKTtGFGmIYDSldyakknE |
| Chain | Residue | Details |
| a | PHE64-GLU86 |
| site_id | PS00548 |
| Number of Residues | 37 |
| Details | RIBOSOMAL_S3 Ribosomal protein S3 signature. AKsmkfvdGlMihSgdpVnyyVDtavrhvlLrqGvlG |
| Chain | Residue | Details |
| F | ALA147-GLY183 |
| site_id | PS00578 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM |
| Chain | Residue | Details |
| I | ILE52-MET63 |
| site_id | PS00585 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAfvAIGDyn.GhVGlGmkcsk.EVat.AI |
| Chain | Residue | Details |
| E | GLY104-ILE136 |
| site_id | PS00628 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_S19E Ribosomal protein S19e signature. PshfsrgSksVaRrVLQaLE |
| Chain | Residue | Details |
| V | PRO89-GLU108 |
| site_id | PS00632 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVFKlglAkSihhARvLI |
| Chain | Residue | Details |
| L | LEU106-ILE130 |
| site_id | PS00646 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHfwGlrVRGQ |
| Chain | Residue | Details |
| U | ARG121-GLN134 |
| site_id | PS00678 |
| Number of Residues | 15 |
| Details | WD_REPEATS_1 Trp-Asp (WD) repeats signature. ALSGswDgTLRLWDL |
| Chain | Residue | Details |
| g | ALA78-LEU92 | |
| g | ILE120-THR134 | |
| g | ILE165-LEU179 | |
| g | CYS207-LEU221 |
| site_id | PS00712 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_S17E Ribosomal protein S17e signature. IpSKkLRNkIAGYvTH |
| Chain | Residue | Details |
| T | ILE41-HIS56 |
| site_id | PS00733 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S26E Ribosomal protein S26e signature. YCVSCAIH |
| Chain | Residue | Details |
| b | TYR73-HIS80 |
| site_id | PS00948 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S7E Ribosomal protein S7e signature. RLvRELEKKFSgKH |
| Chain | Residue | Details |
| J | ARG78-HIS91 |
| site_id | PS00961 |
| Number of Residues | 9 |
| Details | RIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL |
| Chain | Residue | Details |
| d | GLU60-LEU68 |
| site_id | PS00962 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VlKFLAAGTHLG |
| Chain | Residue | Details |
| C | VAL15-GLY26 |
| site_id | PS00963 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlLVVtDpraDhqpLtEasyvNLP |
| Chain | Residue | Details |
| C | PRO119-PRO143 |
| site_id | PS00996 |
| Number of Residues | 9 |
| Details | RIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA |
| Chain | Residue | Details |
| X | LEU11-ALA19 |
| site_id | PS01168 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgCykittvFShAqtvvlCvgCStvLcqPtG |
| Chain | Residue | Details |
| c | LYS36-GLY68 |
| site_id | PS01189 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S12E Ribosomal protein S12e signature. ALQevLktAlihDGLarGI |
| Chain | Residue | Details |
| O | ALA17-ILE35 |
| site_id | PS01191 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVfEvSLaDL |
| Chain | Residue | Details |
| D | LEU62-LEU74 |
| site_id | PS01193 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_S8E Ribosomal protein S8e signature. RrkTGGkrkpy.HkKrKyELG |
| Chain | Residue | Details |
| K | ARG11-GLY30 |
| site_id | PS01262 |
| Number of Residues | 23 |
| Details | IF1A Eukaryotic initiation factor 1A signature. MlGnGRleamCfDGvkRlcHIrG |
| Chain | Residue | Details |
| j | MET41-GLY63 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 91 |
| Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 59 |
| Details | Region: {"description":"Interaction with PPP1R16B","evidences":[{"source":"HAMAP-Rule","id":"MF_03016","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 19 |
| Details | Region: {"description":"Laminin-binding","evidences":[{"source":"HAMAP-Rule","id":"MF_03016","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | Site: {"description":"Cleavage; by ST3; site 1","evidences":[{"source":"HAMAP-Rule","id":"MF_03016","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Site: {"description":"Cleavage; by ST3; site 2","evidences":[{"source":"HAMAP-Rule","id":"MF_03016","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylserine","evidences":[{"source":"HAMAP-Rule","id":"MF_03016","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P08865","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P08865","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P14206","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P08865","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"UniProtKB","id":"P08865","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 71 |
| Details | Domain: {"description":"KH type-2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00118","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylalanine","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 5 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 3 |
| Details | Modified residue: {"description":"Asymmetric dimethylarginine","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62908","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI21 |
| Number of Residues | 62 |
| Details | Domain: {"description":"S4 RNA-binding","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI22 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62702","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI23 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62701","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI25 |
| Number of Residues | 56 |
| Details | Compositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI26 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"ADP-ribosyl glutamic acid","evidences":[{"source":"UniProtKB","id":"P62753","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI27 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"(3R)-3-hydroxyarginine","evidences":[{"source":"UniProtKB","id":"P62753","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI28 |
| Number of Residues | 3 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62753","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI29 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62753","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI30 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62753","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI31 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62081","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI32 |
| Number of Residues | 1 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62081","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI33 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"UniProtKB","id":"P62081","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI34 |
| Number of Residues | 64 |
| Details | Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI35 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62242","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI36 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P62241","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI37 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62241","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI38 |
| Number of Residues | 1 |
| Details | Lipidation: {"description":"N-myristoyl glycine","evidences":[{"source":"UniProtKB","id":"P62241","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI39 |
| Number of Residues | 3 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62241","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI40 |
| Number of Residues | 74 |
| Details | Domain: {"description":"S4 RNA-binding","evidences":[{"source":"PROSITE-ProRule","id":"PRU00182","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI41 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q6ZWN5","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI42 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P46781","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI43 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P46781","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI44 |
| Number of Residues | 3 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P46781","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI46 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylalanine","evidences":[{"source":"UniProtKB","id":"P62280","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI47 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Citrulline","evidences":[{"source":"UniProtKB","id":"P62281","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI48 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62280","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI49 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62281","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI50 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62280","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI51 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"P62281","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI52 |
| Number of Residues | 1 |
| Details | Lipidation: {"description":"S-palmitoyl cysteine","evidences":[{"source":"UniProtKB","id":"P62280","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI53 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P63323","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI54 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62301","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI55 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62277","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI56 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62301","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI57 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P62277","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI58 |
| Number of Residues | 1 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P62277","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI59 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62277","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI60 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62263","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI61 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P62263","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI62 |
| Number of Residues | 4 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62263","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI63 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62249","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI64 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P63276","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI65 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P08708","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI66 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"UniProtKB","id":"P08708","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI67 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P39019","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI68 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"P39019","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI69 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q9CZX8","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI70 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q9CZX8","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI71 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P60867","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI72 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P60866","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI73 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylmethionine","evidences":[{"source":"UniProtKB","id":"P63220","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI74 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P63220","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI75 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62245","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI76 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62267","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI77 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"3-hydroxyproline","evidences":[{"source":"UniProtKB","id":"P62266","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI78 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62266","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI79 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62266","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI80 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"26245381","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI81 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62854","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI82 |
| Number of Residues | 22 |
| Details | Zinc finger: {"description":"C4-type","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI83 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"25601755","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4D5L","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4D61","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI84 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P42677","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI85 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62857","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI86 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"26245381","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3JAG","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3JAH","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI87 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62273","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI88 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"P62273","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI89 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62273","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI90 |
| Number of Residues | 23 |
| Details | Zinc finger: {"description":"C4-type","evidences":[{"source":"UniProtKB","id":"P62979","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI91 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62979","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI92 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62983","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI93 |
| Number of Residues | 3 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P62979","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI94 |
| Number of Residues | 31 |
| Details | Repeat: {"description":"WD 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI95 |
| Number of Residues | 30 |
| Details | Repeat: {"description":"WD 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI96 |
| Number of Residues | 30 |
| Details | Repeat: {"description":"WD 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI97 |
| Number of Residues | 32 |
| Details | Repeat: {"description":"WD 4","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI98 |
| Number of Residues | 30 |
| Details | Repeat: {"description":"WD 5","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI99 |
| Number of Residues | 29 |
| Details | Repeat: {"description":"WD 6","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI100 |
| Number of Residues | 30 |
| Details | Repeat: {"description":"WD 7","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI101 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P63244","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI102 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P63244","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI103 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P63244","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI104 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P68040","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI105 |
| Number of Residues | 3 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P63244","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI106 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62852","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI107 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62852","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI108 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62851","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI109 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62862","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI115 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62269","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI116 |
| Number of Residues | 1 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62269","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI117 |
| Number of Residues | 3 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"UniProtKB","id":"P62269","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI118 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62841","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |






