6YAL
Mammalian 48S late-stage initiation complex with beta-globin mRNA
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003723 | molecular_function | RNA binding |
A | 0003743 | molecular_function | translation initiation factor activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0005850 | cellular_component | eukaryotic translation initiation factor 2 complex |
A | 0006412 | biological_process | translation |
A | 0006413 | biological_process | translational initiation |
A | 0010494 | cellular_component | cytoplasmic stress granule |
A | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
A | 0034976 | biological_process | response to endoplasmic reticulum stress |
A | 0043022 | molecular_function | ribosome binding |
A | 0062197 | biological_process | cellular response to chemical stress |
B | 0000049 | molecular_function | tRNA binding |
B | 0000166 | molecular_function | nucleotide binding |
B | 0001731 | biological_process | formation of translation preinitiation complex |
B | 0003743 | molecular_function | translation initiation factor activity |
B | 0003924 | molecular_function | GTPase activity |
B | 0005525 | molecular_function | GTP binding |
B | 0005829 | cellular_component | cytosol |
B | 0005850 | cellular_component | eukaryotic translation initiation factor 2 complex |
B | 0006412 | biological_process | translation |
B | 0006413 | biological_process | translational initiation |
B | 0016787 | molecular_function | hydrolase activity |
C | 0003735 | molecular_function | structural constituent of ribosome |
C | 0005840 | cellular_component | ribosome |
C | 0006412 | biological_process | translation |
C | 0015935 | cellular_component | small ribosomal subunit |
D | 0003735 | molecular_function | structural constituent of ribosome |
D | 0005634 | cellular_component | nucleus |
D | 0005730 | cellular_component | nucleolus |
D | 0005737 | cellular_component | cytoplasm |
D | 0005840 | cellular_component | ribosome |
D | 0006412 | biological_process | translation |
D | 0022626 | cellular_component | cytosolic ribosome |
D | 0022627 | cellular_component | cytosolic small ribosomal subunit |
D | 0030154 | biological_process | cell differentiation |
D | 1990904 | cellular_component | ribonucleoprotein complex |
E | 0003723 | molecular_function | RNA binding |
E | 0003735 | molecular_function | structural constituent of ribosome |
E | 0005840 | cellular_component | ribosome |
E | 0006412 | biological_process | translation |
E | 0015935 | cellular_component | small ribosomal subunit |
F | 0003677 | molecular_function | DNA binding |
F | 0003723 | molecular_function | RNA binding |
F | 0003735 | molecular_function | structural constituent of ribosome |
F | 0005634 | cellular_component | nucleus |
F | 0005730 | cellular_component | nucleolus |
F | 0005737 | cellular_component | cytoplasm |
F | 0005739 | cellular_component | mitochondrion |
F | 0005743 | cellular_component | mitochondrial inner membrane |
F | 0005819 | cellular_component | spindle |
F | 0005840 | cellular_component | ribosome |
F | 0005856 | cellular_component | cytoskeleton |
F | 0006281 | biological_process | DNA repair |
F | 0006412 | biological_process | translation |
F | 0006417 | biological_process | regulation of translation |
F | 0006915 | biological_process | apoptotic process |
F | 0006974 | biological_process | DNA damage response |
F | 0015935 | cellular_component | small ribosomal subunit |
F | 0016020 | cellular_component | membrane |
F | 0016829 | molecular_function | lyase activity |
F | 0022626 | cellular_component | cytosolic ribosome |
F | 0022627 | cellular_component | cytosolic small ribosomal subunit |
F | 0051301 | biological_process | cell division |
F | 0140078 | molecular_function | class I DNA-(apurinic or apyrimidinic site) endonuclease activity |
F | 1990904 | cellular_component | ribonucleoprotein complex |
F | 2001235 | biological_process | positive regulation of apoptotic signaling pathway |
G | 0003723 | molecular_function | RNA binding |
G | 0003735 | molecular_function | structural constituent of ribosome |
G | 0005634 | cellular_component | nucleus |
G | 0005730 | cellular_component | nucleolus |
G | 0005737 | cellular_component | cytoplasm |
G | 0005840 | cellular_component | ribosome |
G | 0006412 | biological_process | translation |
G | 0019843 | molecular_function | rRNA binding |
G | 0022626 | cellular_component | cytosolic ribosome |
G | 0022627 | cellular_component | cytosolic small ribosomal subunit |
G | 1990904 | cellular_component | ribonucleoprotein complex |
H | 0003723 | molecular_function | RNA binding |
H | 0003735 | molecular_function | structural constituent of ribosome |
H | 0006412 | biological_process | translation |
H | 0015935 | cellular_component | small ribosomal subunit |
I | 0003735 | molecular_function | structural constituent of ribosome |
I | 0005840 | cellular_component | ribosome |
I | 0006412 | biological_process | translation |
I | 1990904 | cellular_component | ribonucleoprotein complex |
J | 0003735 | molecular_function | structural constituent of ribosome |
J | 0005634 | cellular_component | nucleus |
J | 0005730 | cellular_component | nucleolus |
J | 0005737 | cellular_component | cytoplasm |
J | 0005813 | cellular_component | centrosome |
J | 0005840 | cellular_component | ribosome |
J | 0005856 | cellular_component | cytoskeleton |
J | 0006364 | biological_process | rRNA processing |
J | 0006412 | biological_process | translation |
J | 0022626 | cellular_component | cytosolic ribosome |
J | 0022627 | cellular_component | cytosolic small ribosomal subunit |
J | 0030686 | cellular_component | 90S preribosome |
J | 0032040 | cellular_component | small-subunit processome |
J | 0042274 | biological_process | ribosomal small subunit biogenesis |
J | 1990904 | cellular_component | ribonucleoprotein complex |
K | 0003735 | molecular_function | structural constituent of ribosome |
K | 0005634 | cellular_component | nucleus |
K | 0005730 | cellular_component | nucleolus |
K | 0005737 | cellular_component | cytoplasm |
K | 0005840 | cellular_component | ribosome |
K | 0006412 | biological_process | translation |
K | 0016020 | cellular_component | membrane |
K | 0022626 | cellular_component | cytosolic ribosome |
K | 1990904 | cellular_component | ribonucleoprotein complex |
L | 0003723 | molecular_function | RNA binding |
L | 0003735 | molecular_function | structural constituent of ribosome |
L | 0005634 | cellular_component | nucleus |
L | 0005730 | cellular_component | nucleolus |
L | 0005737 | cellular_component | cytoplasm |
L | 0005840 | cellular_component | ribosome |
L | 0006412 | biological_process | translation |
L | 0015935 | cellular_component | small ribosomal subunit |
L | 0019843 | molecular_function | rRNA binding |
L | 0022626 | cellular_component | cytosolic ribosome |
L | 0022627 | cellular_component | cytosolic small ribosomal subunit |
L | 0042274 | biological_process | ribosomal small subunit biogenesis |
L | 1990904 | cellular_component | ribonucleoprotein complex |
N | 0003723 | molecular_function | RNA binding |
N | 0003735 | molecular_function | structural constituent of ribosome |
N | 0005634 | cellular_component | nucleus |
N | 0005730 | cellular_component | nucleolus |
N | 0005737 | cellular_component | cytoplasm |
N | 0005840 | cellular_component | ribosome |
N | 0006412 | biological_process | translation |
N | 0019843 | molecular_function | rRNA binding |
N | 0022626 | cellular_component | cytosolic ribosome |
N | 0022627 | cellular_component | cytosolic small ribosomal subunit |
N | 1990904 | cellular_component | ribonucleoprotein complex |
O | 0003735 | molecular_function | structural constituent of ribosome |
O | 0005634 | cellular_component | nucleus |
O | 0005730 | cellular_component | nucleolus |
O | 0005737 | cellular_component | cytoplasm |
O | 0005794 | cellular_component | Golgi apparatus |
O | 0005829 | cellular_component | cytosol |
O | 0005840 | cellular_component | ribosome |
O | 0006412 | biological_process | translation |
O | 0022626 | cellular_component | cytosolic ribosome |
O | 0022627 | cellular_component | cytosolic small ribosomal subunit |
O | 0032040 | cellular_component | small-subunit processome |
O | 0042274 | biological_process | ribosomal small subunit biogenesis |
O | 0043231 | cellular_component | intracellular membrane-bounded organelle |
O | 0090263 | biological_process | positive regulation of canonical Wnt signaling pathway |
O | 1990904 | cellular_component | ribonucleoprotein complex |
P | 0003735 | molecular_function | structural constituent of ribosome |
P | 0005634 | cellular_component | nucleus |
P | 0005730 | cellular_component | nucleolus |
P | 0005737 | cellular_component | cytoplasm |
P | 0005840 | cellular_component | ribosome |
P | 0006412 | biological_process | translation |
P | 0022626 | cellular_component | cytosolic ribosome |
P | 0022627 | cellular_component | cytosolic small ribosomal subunit |
P | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
P | 1990904 | cellular_component | ribonucleoprotein complex |
Q | 0003735 | molecular_function | structural constituent of ribosome |
Q | 0005634 | cellular_component | nucleus |
Q | 0005730 | cellular_component | nucleolus |
Q | 0005737 | cellular_component | cytoplasm |
Q | 0005840 | cellular_component | ribosome |
Q | 0006412 | biological_process | translation |
Q | 0022627 | cellular_component | cytosolic small ribosomal subunit |
Q | 1990904 | cellular_component | ribonucleoprotein complex |
R | 0000028 | biological_process | ribosomal small subunit assembly |
R | 0000056 | biological_process | ribosomal small subunit export from nucleus |
R | 0003723 | molecular_function | RNA binding |
R | 0003735 | molecular_function | structural constituent of ribosome |
R | 0005737 | cellular_component | cytoplasm |
R | 0005840 | cellular_component | ribosome |
R | 0006364 | biological_process | rRNA processing |
R | 0006412 | biological_process | translation |
R | 0015935 | cellular_component | small ribosomal subunit |
R | 0022626 | cellular_component | cytosolic ribosome |
R | 0022627 | cellular_component | cytosolic small ribosomal subunit |
R | 0042274 | biological_process | ribosomal small subunit biogenesis |
R | 0097371 | molecular_function | MDM2/MDM4 family protein binding |
R | 1901798 | biological_process | positive regulation of signal transduction by p53 class mediator |
R | 1990904 | cellular_component | ribonucleoprotein complex |
R | 1990948 | molecular_function | ubiquitin ligase inhibitor activity |
S | 0000462 | biological_process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
S | 0003723 | molecular_function | RNA binding |
S | 0003735 | molecular_function | structural constituent of ribosome |
S | 0005634 | cellular_component | nucleus |
S | 0005730 | cellular_component | nucleolus |
S | 0005737 | cellular_component | cytoplasm |
S | 0005840 | cellular_component | ribosome |
S | 0006412 | biological_process | translation |
S | 0015935 | cellular_component | small ribosomal subunit |
S | 0022626 | cellular_component | cytosolic ribosome |
S | 0022627 | cellular_component | cytosolic small ribosomal subunit |
S | 1990904 | cellular_component | ribonucleoprotein complex |
T | 0003735 | molecular_function | structural constituent of ribosome |
T | 0005634 | cellular_component | nucleus |
T | 0005730 | cellular_component | nucleolus |
T | 0005737 | cellular_component | cytoplasm |
T | 0005840 | cellular_component | ribosome |
T | 0006412 | biological_process | translation |
T | 0022626 | cellular_component | cytosolic ribosome |
T | 1990904 | cellular_component | ribonucleoprotein complex |
U | 0003676 | molecular_function | nucleic acid binding |
U | 0003723 | molecular_function | RNA binding |
U | 0003735 | molecular_function | structural constituent of ribosome |
U | 0005737 | cellular_component | cytoplasm |
U | 0005829 | cellular_component | cytosol |
U | 0005840 | cellular_component | ribosome |
U | 0006412 | biological_process | translation |
U | 0015935 | cellular_component | small ribosomal subunit |
U | 0019843 | molecular_function | rRNA binding |
U | 0022626 | cellular_component | cytosolic ribosome |
U | 1990904 | cellular_component | ribonucleoprotein complex |
V | 0000028 | biological_process | ribosomal small subunit assembly |
V | 0003723 | molecular_function | RNA binding |
V | 0003735 | molecular_function | structural constituent of ribosome |
V | 0005634 | cellular_component | nucleus |
V | 0005730 | cellular_component | nucleolus |
V | 0005737 | cellular_component | cytoplasm |
V | 0005840 | cellular_component | ribosome |
V | 0006412 | biological_process | translation |
V | 0022626 | cellular_component | cytosolic ribosome |
V | 0022627 | cellular_component | cytosolic small ribosomal subunit |
V | 1990904 | cellular_component | ribonucleoprotein complex |
W | 0003723 | molecular_function | RNA binding |
W | 0003735 | molecular_function | structural constituent of ribosome |
W | 0005737 | cellular_component | cytoplasm |
W | 0005840 | cellular_component | ribosome |
W | 0006412 | biological_process | translation |
W | 0015935 | cellular_component | small ribosomal subunit |
W | 0022626 | cellular_component | cytosolic ribosome |
W | 1990904 | cellular_component | ribonucleoprotein complex |
X | 0003735 | molecular_function | structural constituent of ribosome |
X | 0005737 | cellular_component | cytoplasm |
X | 0005783 | cellular_component | endoplasmic reticulum |
X | 0005791 | cellular_component | rough endoplasmic reticulum |
X | 0005829 | cellular_component | cytosol |
X | 0005840 | cellular_component | ribosome |
X | 0006412 | biological_process | translation |
X | 0022626 | cellular_component | cytosolic ribosome |
X | 1990904 | cellular_component | ribonucleoprotein complex |
Y | 0003735 | molecular_function | structural constituent of ribosome |
Y | 0005634 | cellular_component | nucleus |
Y | 0005730 | cellular_component | nucleolus |
Y | 0005737 | cellular_component | cytoplasm |
Y | 0005840 | cellular_component | ribosome |
Y | 0006412 | biological_process | translation |
Y | 0022626 | cellular_component | cytosolic ribosome |
Y | 1990904 | cellular_component | ribonucleoprotein complex |
Z | 0003735 | molecular_function | structural constituent of ribosome |
Z | 0005634 | cellular_component | nucleus |
Z | 0005730 | cellular_component | nucleolus |
Z | 0005737 | cellular_component | cytoplasm |
Z | 0005783 | cellular_component | endoplasmic reticulum |
Z | 0005791 | cellular_component | rough endoplasmic reticulum |
Z | 0005829 | cellular_component | cytosol |
Z | 0005840 | cellular_component | ribosome |
Z | 0006412 | biological_process | translation |
Z | 0015935 | cellular_component | small ribosomal subunit |
Z | 0022626 | cellular_component | cytosolic ribosome |
Z | 1990904 | cellular_component | ribonucleoprotein complex |
a | 0003735 | molecular_function | structural constituent of ribosome |
a | 0005840 | cellular_component | ribosome |
a | 0006412 | biological_process | translation |
a | 0022626 | cellular_component | cytosolic ribosome |
a | 0022627 | cellular_component | cytosolic small ribosomal subunit |
a | 1990904 | cellular_component | ribonucleoprotein complex |
b | 0003729 | molecular_function | mRNA binding |
b | 0003735 | molecular_function | structural constituent of ribosome |
b | 0005737 | cellular_component | cytoplasm |
b | 0005783 | cellular_component | endoplasmic reticulum |
b | 0005791 | cellular_component | rough endoplasmic reticulum |
b | 0005829 | cellular_component | cytosol |
b | 0005840 | cellular_component | ribosome |
b | 0006412 | biological_process | translation |
b | 0022626 | cellular_component | cytosolic ribosome |
b | 0022627 | cellular_component | cytosolic small ribosomal subunit |
b | 1990904 | cellular_component | ribonucleoprotein complex |
c | 0003735 | molecular_function | structural constituent of ribosome |
c | 0005634 | cellular_component | nucleus |
c | 0005730 | cellular_component | nucleolus |
c | 0005737 | cellular_component | cytoplasm |
c | 0005829 | cellular_component | cytosol |
c | 0005840 | cellular_component | ribosome |
c | 0006364 | biological_process | rRNA processing |
c | 0006412 | biological_process | translation |
c | 0008270 | molecular_function | zinc ion binding |
c | 0014069 | cellular_component | postsynaptic density |
c | 0022626 | cellular_component | cytosolic ribosome |
c | 0022627 | cellular_component | cytosolic small ribosomal subunit |
c | 0032040 | cellular_component | small-subunit processome |
c | 0042274 | biological_process | ribosomal small subunit biogenesis |
c | 0046872 | molecular_function | metal ion binding |
c | 1990904 | cellular_component | ribonucleoprotein complex |
d | 0000028 | biological_process | ribosomal small subunit assembly |
d | 0002181 | biological_process | cytoplasmic translation |
d | 0003735 | molecular_function | structural constituent of ribosome |
d | 0005634 | cellular_component | nucleus |
d | 0005730 | cellular_component | nucleolus |
d | 0005737 | cellular_component | cytoplasm |
d | 0005783 | cellular_component | endoplasmic reticulum |
d | 0005791 | cellular_component | rough endoplasmic reticulum |
d | 0005829 | cellular_component | cytosol |
d | 0005840 | cellular_component | ribosome |
d | 0006364 | biological_process | rRNA processing |
d | 0006412 | biological_process | translation |
d | 0022626 | cellular_component | cytosolic ribosome |
d | 0022627 | cellular_component | cytosolic small ribosomal subunit |
d | 0030490 | biological_process | maturation of SSU-rRNA |
d | 0032040 | cellular_component | small-subunit processome |
d | 0042254 | biological_process | ribosome biogenesis |
d | 0042274 | biological_process | ribosomal small subunit biogenesis |
d | 0045202 | cellular_component | synapse |
d | 1990904 | cellular_component | ribonucleoprotein complex |
e | 0002181 | biological_process | cytoplasmic translation |
e | 0003735 | molecular_function | structural constituent of ribosome |
e | 0005737 | cellular_component | cytoplasm |
e | 0005783 | cellular_component | endoplasmic reticulum |
e | 0005791 | cellular_component | rough endoplasmic reticulum |
e | 0005829 | cellular_component | cytosol |
e | 0005840 | cellular_component | ribosome |
e | 0006412 | biological_process | translation |
e | 0008270 | molecular_function | zinc ion binding |
e | 0022626 | cellular_component | cytosolic ribosome |
e | 0022627 | cellular_component | cytosolic small ribosomal subunit |
e | 0046872 | molecular_function | metal ion binding |
e | 1990904 | cellular_component | ribonucleoprotein complex |
f | 0003735 | molecular_function | structural constituent of ribosome |
f | 0005840 | cellular_component | ribosome |
f | 0006412 | biological_process | translation |
g | 0001891 | cellular_component | phagocytic cup |
g | 0005634 | cellular_component | nucleus |
g | 0005737 | cellular_component | cytoplasm |
g | 0005840 | cellular_component | ribosome |
g | 0005886 | cellular_component | plasma membrane |
g | 0006417 | biological_process | regulation of translation |
g | 0006915 | biological_process | apoptotic process |
g | 0007369 | biological_process | gastrulation |
g | 0015935 | cellular_component | small ribosomal subunit |
g | 0016020 | cellular_component | membrane |
g | 0030425 | cellular_component | dendrite |
g | 0042995 | cellular_component | cell projection |
g | 0043022 | molecular_function | ribosome binding |
g | 0043204 | cellular_component | perikaryon |
g | 0045182 | molecular_function | translation regulator activity |
g | 0048471 | cellular_component | perinuclear region of cytoplasm |
g | 0048511 | biological_process | rhythmic process |
g | 1990904 | cellular_component | ribonucleoprotein complex |
i | 0003735 | molecular_function | structural constituent of ribosome |
i | 0005634 | cellular_component | nucleus |
i | 0005737 | cellular_component | cytoplasm |
i | 0005829 | cellular_component | cytosol |
i | 0005840 | cellular_component | ribosome |
i | 0006412 | biological_process | translation |
i | 0022627 | cellular_component | cytosolic small ribosomal subunit |
i | 1990904 | cellular_component | ribonucleoprotein complex |
j | 0003723 | molecular_function | RNA binding |
j | 0003743 | molecular_function | translation initiation factor activity |
j | 0006413 | biological_process | translational initiation |
k | 0000166 | molecular_function | nucleotide binding |
k | 0005524 | molecular_function | ATP binding |
k | 0005737 | cellular_component | cytoplasm |
k | 0006412 | biological_process | translation |
k | 0016887 | molecular_function | ATP hydrolysis activity |
k | 0060255 | biological_process | regulation of macromolecule metabolic process |
l | 0003735 | molecular_function | structural constituent of ribosome |
l | 0005737 | cellular_component | cytoplasm |
l | 0005840 | cellular_component | ribosome |
l | 0006412 | biological_process | translation |
l | 1990904 | cellular_component | ribonucleoprotein complex |
n | 0003735 | molecular_function | structural constituent of ribosome |
n | 0005634 | cellular_component | nucleus |
n | 0005730 | cellular_component | nucleolus |
n | 0005737 | cellular_component | cytoplasm |
n | 0005840 | cellular_component | ribosome |
n | 0006364 | biological_process | rRNA processing |
n | 0014069 | cellular_component | postsynaptic density |
n | 0022626 | cellular_component | cytosolic ribosome |
n | 0022627 | cellular_component | cytosolic small ribosomal subunit |
n | 0042274 | biological_process | ribosomal small subunit biogenesis |
n | 0045202 | cellular_component | synapse |
n | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | binding site for residue SF4 k 701 |
Chain | Residue |
k | ALA9 |
k | CYS29 |
k | ILE39 |
k | CYS55 |
k | GLY57 |
k | CYS58 |
k | GLY59 |
k | CYS61 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue SF4 k 702 |
Chain | Residue |
k | CYS21 |
k | CYS25 |
k | CYS65 |
k | PHE67 |
k | LEU70 |
k | CYS16 |
site_id | AC3 |
Number of Residues | 3 |
Details | binding site for residue MG k 703 |
Chain | Residue |
k | SER117 |
k | GLN171 |
k | GNP704 |
site_id | AC4 |
Number of Residues | 12 |
Details | binding site for residue GNP k 704 |
Chain | Residue |
k | ASN112 |
k | GLY113 |
k | ILE114 |
k | GLY115 |
k | LYS116 |
k | SER117 |
k | THR118 |
k | GLN171 |
k | HIS274 |
k | SER294 |
k | SER463 |
k | MG703 |
site_id | AC5 |
Number of Residues | 14 |
Details | binding site for residue GNP k 705 |
Chain | Residue |
k | ARG212 |
k | ASP216 |
k | LEU217 |
k | SER218 |
k | GLU221 |
k | MET357 |
k | GLU359 |
k | PHE360 |
k | ASN381 |
k | GLY382 |
k | GLY384 |
k | LYS385 |
k | THR386 |
k | HIS520 |
Functional Information from PROSITE/UniProt
site_id | PS00052 |
Number of Residues | 27 |
Details | RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsMMmhgrnnGKKlmtvrIVkhA |
Chain | Residue | Details |
H | GLU70-ALA96 |
site_id | PS00053 |
Number of Residues | 18 |
Details | RIBOSOMAL_S8 Ribosomal protein S8 signature. GfiVLTTSaGIMdheeAR |
Chain | Residue | Details |
Y | GLY100-ARG117 |
site_id | PS00054 |
Number of Residues | 23 |
Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GMkIgrieDvTPiPSD |
Chain | Residue | Details |
Q | LEU116-ASP138 |
site_id | PS00055 |
Number of Residues | 8 |
Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR |
Chain | Residue | Details |
Z | LYS60-ARG67 |
site_id | PS00056 |
Number of Residues | 13 |
Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgEcRPLS |
Chain | Residue | Details |
N | GLY123-SER135 |
site_id | PS00198 |
Number of Residues | 12 |
Details | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiGCGiCIkKCP |
Chain | Residue | Details |
k | CYS55-PRO66 |
site_id | PS00211 |
Number of Residues | 15 |
Details | ABC_TRANSPORTER_1 ABC transporters family signature. LSGGELQRVALALCL |
Chain | Residue | Details |
k | LEU462-LEU476 |
site_id | PS00299 |
Number of Residues | 26 |
Details | UBIQUITIN_1 Ubiquitin domain signature. KahVaSlegIApedQvVLLaGtpleD |
Chain | Residue | Details |
i | LYS25-ASP50 |
site_id | PS00323 |
Number of Residues | 25 |
Details | RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKtfnqveIkpemIGhyLGEFsiT |
Chain | Residue | Details |
R | ASN98-THR122 |
site_id | PS00360 |
Number of Residues | 19 |
Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvAQiyAirqSiSKAL |
Chain | Residue | Details |
S | GLY74-LEU92 |
site_id | PS00361 |
Number of Residues | 16 |
Details | RIBOSOMAL_S10 Ribosomal protein S10 signature. AkekNLkvkGPVrMPT |
Chain | Residue | Details |
W | ALA43-THR58 |
site_id | PS00362 |
Number of Residues | 31 |
Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY |
Chain | Residue | Details |
P | VAL98-TYR128 |
site_id | PS00527 |
Number of Residues | 23 |
Details | RIBOSOMAL_S14 Ribosomal protein S14 signature. RvCsnrhglirkyg.LNMCRqCFR |
Chain | Residue | Details |
e | ARG22-ARG44 |
site_id | PS00528 |
Number of Residues | 15 |
Details | RIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRVAaPkhWmLdK |
Chain | Residue | Details |
G | HIS8-LYS22 |
site_id | PS00529 |
Number of Residues | 23 |
Details | RIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKTtGFGmIYDSldyakknE |
Chain | Residue | Details |
a | PHE64-GLU86 |
site_id | PS00548 |
Number of Residues | 37 |
Details | RIBOSOMAL_S3 Ribosomal protein S3 signature. AKsmkfvdGlMihSgdpVnyyVDtavrhvlLrqGvlG |
Chain | Residue | Details |
F | ALA147-GLY183 |
site_id | PS00578 |
Number of Residues | 12 |
Details | RIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM |
Chain | Residue | Details |
I | ILE52-MET63 |
site_id | PS00585 |
Number of Residues | 33 |
Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAfvAIGDyn.GhVGlGmkcsk.EVat.AI |
Chain | Residue | Details |
E | GLY104-ILE136 |
site_id | PS00628 |
Number of Residues | 20 |
Details | RIBOSOMAL_S19E Ribosomal protein S19e signature. PshfsrgSksVaRrVLQaLE |
Chain | Residue | Details |
V | PRO89-GLU108 |
site_id | PS00632 |
Number of Residues | 25 |
Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVFKlglAkSihhARvLI |
Chain | Residue | Details |
L | LEU106-ILE130 |
site_id | PS00646 |
Number of Residues | 14 |
Details | RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHfwGlrVRGQ |
Chain | Residue | Details |
U | ARG121-GLN134 |
site_id | PS00678 |
Number of Residues | 15 |
Details | WD_REPEATS_1 Trp-Asp (WD) repeats signature. ALSGswDgTLRLWDL |
Chain | Residue | Details |
g | ALA78-LEU92 | |
g | ILE120-THR134 | |
g | ILE165-LEU179 | |
g | CYS207-LEU221 |
site_id | PS00712 |
Number of Residues | 16 |
Details | RIBOSOMAL_S17E Ribosomal protein S17e signature. IpSKkLRNkIAGYvTH |
Chain | Residue | Details |
T | ILE41-HIS56 |
site_id | PS00733 |
Number of Residues | 8 |
Details | RIBOSOMAL_S26E Ribosomal protein S26e signature. YCVSCAIH |
Chain | Residue | Details |
b | TYR73-HIS80 |
site_id | PS00948 |
Number of Residues | 14 |
Details | RIBOSOMAL_S7E Ribosomal protein S7e signature. RLvRELEKKFSgKH |
Chain | Residue | Details |
J | ARG78-HIS91 |
site_id | PS00961 |
Number of Residues | 9 |
Details | RIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL |
Chain | Residue | Details |
d | GLU60-LEU68 |
site_id | PS00962 |
Number of Residues | 12 |
Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VlKFLAAGTHLG |
Chain | Residue | Details |
C | VAL15-GLY26 |
site_id | PS00963 |
Number of Residues | 25 |
Details | RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlLVVtDpraDhqpLtEasyvNLP |
Chain | Residue | Details |
C | PRO119-PRO143 |
site_id | PS00996 |
Number of Residues | 9 |
Details | RIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA |
Chain | Residue | Details |
X | LEU11-ALA19 |
site_id | PS01168 |
Number of Residues | 33 |
Details | RIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgCykittvFShAqtvvlCvgCStvLcqPtG |
Chain | Residue | Details |
c | LYS36-GLY68 |
site_id | PS01189 |
Number of Residues | 19 |
Details | RIBOSOMAL_S12E Ribosomal protein S12e signature. ALQevLktAlihDGLarGI |
Chain | Residue | Details |
O | ALA17-ILE35 |
site_id | PS01191 |
Number of Residues | 13 |
Details | RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVfEvSLaDL |
Chain | Residue | Details |
D | LEU62-LEU74 |
site_id | PS01193 |
Number of Residues | 20 |
Details | RIBOSOMAL_S8E Ribosomal protein S8e signature. RrkTGGkrkpy.HkKrKyELG |
Chain | Residue | Details |
K | ARG11-GLY30 |
site_id | PS01262 |
Number of Residues | 23 |
Details | IF1A Eukaryotic initiation factor 1A signature. MlGnGRleamCfDGvkRlcHIrG |
Chain | Residue | Details |
j | MET41-GLY63 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 91 |
Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 59 |
Details | Region: {"description":"Interaction with PPP1R16B","evidences":[{"source":"HAMAP-Rule","id":"MF_03016","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 19 |
Details | Region: {"description":"Laminin-binding","evidences":[{"source":"HAMAP-Rule","id":"MF_03016","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | Site: {"description":"Cleavage; by ST3; site 1","evidences":[{"source":"HAMAP-Rule","id":"MF_03016","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 1 |
Details | Site: {"description":"Cleavage; by ST3; site 2","evidences":[{"source":"HAMAP-Rule","id":"MF_03016","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N-acetylserine","evidences":[{"source":"HAMAP-Rule","id":"MF_03016","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P08865","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P08865","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI9 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P14206","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI10 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P08865","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI11 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"UniProtKB","id":"P08865","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI12 |
Number of Residues | 71 |
Details | Domain: {"description":"KH type-2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00118","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI13 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N-acetylalanine","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI14 |
Number of Residues | 5 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI15 |
Number of Residues | 4 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI16 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI17 |
Number of Residues | 3 |
Details | Modified residue: {"description":"Asymmetric dimethylarginine","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI18 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62908","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI19 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI20 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"UniProtKB","id":"P23396","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI21 |
Number of Residues | 62 |
Details | Domain: {"description":"S4 RNA-binding","evidences":[{"evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI22 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62702","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI23 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62701","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI25 |
Number of Residues | 56 |
Details | Compositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI26 |
Number of Residues | 1 |
Details | Modified residue: {"description":"ADP-ribosyl glutamic acid","evidences":[{"source":"UniProtKB","id":"P62753","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI27 |
Number of Residues | 1 |
Details | Modified residue: {"description":"(3R)-3-hydroxyarginine","evidences":[{"source":"UniProtKB","id":"P62753","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI28 |
Number of Residues | 3 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62753","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI29 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62753","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI30 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62753","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI31 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62081","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI32 |
Number of Residues | 1 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62081","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI33 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"UniProtKB","id":"P62081","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI34 |
Number of Residues | 64 |
Details | Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI35 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62242","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI36 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P62241","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI37 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62241","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI38 |
Number of Residues | 1 |
Details | Lipidation: {"description":"N-myristoyl glycine","evidences":[{"source":"UniProtKB","id":"P62241","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI39 |
Number of Residues | 3 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62241","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI40 |
Number of Residues | 74 |
Details | Domain: {"description":"S4 RNA-binding","evidences":[{"source":"PROSITE-ProRule","id":"PRU00182","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI41 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q6ZWN5","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI42 |
Number of Residues | 2 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P46781","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI43 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P46781","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI44 |
Number of Residues | 3 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P46781","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI46 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N-acetylalanine","evidences":[{"source":"UniProtKB","id":"P62280","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI47 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Citrulline","evidences":[{"source":"UniProtKB","id":"P62281","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI48 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62280","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI49 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62281","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI50 |
Number of Residues | 2 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62280","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI51 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"P62281","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI52 |
Number of Residues | 1 |
Details | Lipidation: {"description":"S-palmitoyl cysteine","evidences":[{"source":"UniProtKB","id":"P62280","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI53 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P63323","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI54 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62301","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI55 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62277","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI56 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62301","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI57 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P62277","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI58 |
Number of Residues | 1 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P62277","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI59 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62277","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI60 |
Number of Residues | 2 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62263","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI61 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P62263","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI62 |
Number of Residues | 4 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62263","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI63 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62249","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI64 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P63276","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI65 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P08708","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI66 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"UniProtKB","id":"P08708","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI67 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P39019","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI68 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"P39019","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI69 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q9CZX8","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI70 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q9CZX8","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI71 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P60867","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI72 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P60866","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI73 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N-acetylmethionine","evidences":[{"source":"UniProtKB","id":"P63220","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI74 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P63220","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI75 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62245","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI76 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62267","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI77 |
Number of Residues | 1 |
Details | Modified residue: {"description":"3-hydroxyproline","evidences":[{"source":"UniProtKB","id":"P62266","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI78 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62266","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI79 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62266","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI80 |
Number of Residues | 4 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"26245381","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI81 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62854","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI82 |
Number of Residues | 22 |
Details | Zinc finger: {"description":"C4-type","evidences":[{"evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI83 |
Number of Residues | 4 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"25601755","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4D5L","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4D61","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI84 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P42677","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI85 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62857","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI86 |
Number of Residues | 4 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"26245381","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3JAG","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3JAH","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI87 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62273","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI88 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"P62273","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI89 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62273","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI90 |
Number of Residues | 23 |
Details | Zinc finger: {"description":"C4-type","evidences":[{"source":"UniProtKB","id":"P62979","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI91 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62979","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI92 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62983","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI93 |
Number of Residues | 3 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P62979","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI94 |
Number of Residues | 31 |
Details | Repeat: {"description":"WD 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI95 |
Number of Residues | 30 |
Details | Repeat: {"description":"WD 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI96 |
Number of Residues | 30 |
Details | Repeat: {"description":"WD 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI97 |
Number of Residues | 32 |
Details | Repeat: {"description":"WD 4","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI98 |
Number of Residues | 30 |
Details | Repeat: {"description":"WD 5","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI99 |
Number of Residues | 29 |
Details | Repeat: {"description":"WD 6","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI100 |
Number of Residues | 30 |
Details | Repeat: {"description":"WD 7","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI101 |
Number of Residues | 4 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P63244","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI102 |
Number of Residues | 2 |
Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P63244","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI103 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P63244","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI104 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P68040","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI105 |
Number of Residues | 3 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P63244","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI106 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62852","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI107 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62852","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI108 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P62851","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI109 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62862","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI115 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62269","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI116 |
Number of Residues | 1 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62269","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI117 |
Number of Residues | 3 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"UniProtKB","id":"P62269","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI118 |
Number of Residues | 2 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P62841","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |