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6Y92

Structure of full-length CD20 in complex with Ofatumumab Fab

Functional Information from GO Data
ChainGOidnamespacecontents
A0016020cellular_componentmembrane
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue Y01 A 301
ChainResidue
ASER188
AGLY192
BY01304

site_idAC2
Number of Residues5
Detailsbinding site for residue Y01 A 302
ChainResidue
AGLY67
AGLY68
ALEU69
AMET71
BY01302

site_idAC3
Number of Residues5
Detailsbinding site for residue Y01 B 302
ChainResidue
BTYR184
BSER188
BLEU191
BGLY192
AY01302

site_idAC4
Number of Residues3
Detailsbinding site for residue Y01 B 304
ChainResidue
AY01301
BGLY68
BMET71

site_idAC5
Number of Residues5
Detailsbinding site for Di-peptide Y01 B 301 and LYS B 50
ChainResidue
BGLU48
BSER49
BTHR51
BLEU52
BALA54

site_idAC6
Number of Residues9
Detailsbinding site for Di-peptide Y01 B 303 and PHE B 203
ChainResidue
AALA54
BILE199
BPHE200
BALA201
BPHE202
BGLN204
BGLU205
BLEU206
BVAL207

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH
ChainResidueDetails
CTYR203-HIS209
DTYR192-HIS198

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues162
DetailsTransmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues102
DetailsTopological domain: {"description":"Extracellular","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues28
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues12
DetailsRegion: {"description":"Epitope 1"}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues28
DetailsRegion: {"description":"Epitope 2"}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues14
DetailsRegion: {"description":"Epitope 3 (recognized by antibodies, including Rituximab)"}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues2
DetailsLipidation: {"description":"S-palmitoyl cysteine","evidences":[{"source":"PubMed","id":"22615937","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

249697

PDB entries from 2026-02-25

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