6Y79
Cryo-EM structure of a respiratory complex I F89A mutant
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| 1 | 0003954 | molecular_function | NADH dehydrogenase activity |
| 1 | 0005743 | cellular_component | mitochondrial inner membrane |
| 1 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 1 | 0009060 | biological_process | aerobic respiration |
| 1 | 0016020 | cellular_component | membrane |
| 1 | 0022904 | biological_process | respiratory electron transport chain |
| 1 | 0045271 | cellular_component | respiratory chain complex I |
| 1 | 1902600 | biological_process | proton transmembrane transport |
| 2 | 0005743 | cellular_component | mitochondrial inner membrane |
| 2 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 2 | 0022904 | biological_process | respiratory electron transport chain |
| 2 | 0045271 | cellular_component | respiratory chain complex I |
| 2 | 1902600 | biological_process | proton transmembrane transport |
| 3 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 3 | 0022904 | biological_process | respiratory electron transport chain |
| 3 | 0031966 | cellular_component | mitochondrial membrane |
| 3 | 0045271 | cellular_component | respiratory chain complex I |
| 3 | 1902600 | biological_process | proton transmembrane transport |
| 4 | 0003954 | molecular_function | NADH dehydrogenase activity |
| 4 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 4 | 0009060 | biological_process | aerobic respiration |
| 4 | 0015990 | biological_process | electron transport coupled proton transport |
| 4 | 0022904 | biological_process | respiratory electron transport chain |
| 4 | 0031966 | cellular_component | mitochondrial membrane |
| 4 | 0042773 | biological_process | ATP synthesis coupled electron transport |
| 4 | 0045271 | cellular_component | respiratory chain complex I |
| 4 | 0048039 | molecular_function | ubiquinone binding |
| 5 | 0005743 | cellular_component | mitochondrial inner membrane |
| 5 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 5 | 0015990 | biological_process | electron transport coupled proton transport |
| 5 | 0022904 | biological_process | respiratory electron transport chain |
| 5 | 0042773 | biological_process | ATP synthesis coupled electron transport |
| 5 | 0045271 | cellular_component | respiratory chain complex I |
| 6 | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| 6 | 0022904 | biological_process | respiratory electron transport chain |
| 6 | 0031966 | cellular_component | mitochondrial membrane |
| 6 | 1902600 | biological_process | proton transmembrane transport |
| 8 | 0005739 | cellular_component | mitochondrion |
| 8 | 0005743 | cellular_component | mitochondrial inner membrane |
| 8 | 0005758 | cellular_component | mitochondrial intermembrane space |
| 8 | 0022904 | biological_process | respiratory electron transport chain |
| 8 | 0045271 | cellular_component | respiratory chain complex I |
| 9 | 0005743 | cellular_component | mitochondrial inner membrane |
| 9 | 0005758 | cellular_component | mitochondrial intermembrane space |
| 9 | 0022904 | biological_process | respiratory electron transport chain |
| 9 | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| 9 | 0045271 | cellular_component | respiratory chain complex I |
| a | 0005739 | cellular_component | mitochondrion |
| a | 0045271 | cellular_component | respiratory chain complex I |
| A | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| A | 0016020 | cellular_component | membrane |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| A | 0042773 | biological_process | ATP synthesis coupled electron transport |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051536 | molecular_function | iron-sulfur cluster binding |
| A | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
| A | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| A | 1902600 | biological_process | proton transmembrane transport |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0005739 | cellular_component | mitochondrion |
| B | 0005743 | cellular_component | mitochondrial inner membrane |
| B | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| B | 0010181 | molecular_function | FMN binding |
| B | 0022904 | biological_process | respiratory electron transport chain |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0051287 | molecular_function | NAD binding |
| B | 0051536 | molecular_function | iron-sulfur cluster binding |
| B | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| B | 1902600 | biological_process | proton transmembrane transport |
| c | 0005739 | cellular_component | mitochondrion |
| c | 0005743 | cellular_component | mitochondrial inner membrane |
| c | 0022900 | biological_process | electron transport chain |
| c | 0022904 | biological_process | respiratory electron transport chain |
| c | 0045271 | cellular_component | respiratory chain complex I |
| C | 0005743 | cellular_component | mitochondrial inner membrane |
| C | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| C | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| C | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| C | 0045271 | cellular_component | respiratory chain complex I |
| C | 0048038 | molecular_function | quinone binding |
| C | 0051287 | molecular_function | NAD binding |
| C | 1902600 | biological_process | proton transmembrane transport |
| d | 0005739 | cellular_component | mitochondrion |
| d | 0005743 | cellular_component | mitochondrial inner membrane |
| d | 0022904 | biological_process | respiratory electron transport chain |
| d | 0045271 | cellular_component | respiratory chain complex I |
| D | 0005743 | cellular_component | mitochondrial inner membrane |
| D | 0022904 | biological_process | respiratory electron transport chain |
| D | 0045271 | cellular_component | respiratory chain complex I |
| E | 0000166 | molecular_function | nucleotide binding |
| E | 0005739 | cellular_component | mitochondrion |
| E | 0006744 | biological_process | ubiquinone biosynthetic process |
| E | 0044877 | molecular_function | protein-containing complex binding |
| f | 0005743 | cellular_component | mitochondrial inner membrane |
| f | 0022904 | biological_process | respiratory electron transport chain |
| f | 0045271 | cellular_component | respiratory chain complex I |
| F | 0005743 | cellular_component | mitochondrial inner membrane |
| F | 0022904 | biological_process | respiratory electron transport chain |
| F | 0045271 | cellular_component | respiratory chain complex I |
| G | 0005739 | cellular_component | mitochondrion |
| G | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| G | 0016020 | cellular_component | membrane |
| G | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| G | 0045271 | cellular_component | respiratory chain complex I |
| G | 1902600 | biological_process | proton transmembrane transport |
| h | 0005743 | cellular_component | mitochondrial inner membrane |
| h | 0016020 | cellular_component | membrane |
| h | 0022904 | biological_process | respiratory electron transport chain |
| h | 0045271 | cellular_component | respiratory chain complex I |
| H | 0005743 | cellular_component | mitochondrial inner membrane |
| H | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| H | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| H | 0016491 | molecular_function | oxidoreductase activity |
| H | 0046872 | molecular_function | metal ion binding |
| H | 0051536 | molecular_function | iron-sulfur cluster binding |
| H | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
| H | 0098796 | cellular_component | membrane protein complex |
| H | 1902494 | cellular_component | catalytic complex |
| H | 1902600 | biological_process | proton transmembrane transport |
| I | 0003954 | molecular_function | NADH dehydrogenase activity |
| I | 0005739 | cellular_component | mitochondrion |
| I | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| I | 0016020 | cellular_component | membrane |
| I | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| I | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| I | 0045271 | cellular_component | respiratory chain complex I |
| I | 0046872 | molecular_function | metal ion binding |
| I | 0051536 | molecular_function | iron-sulfur cluster binding |
| I | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| J | 0005743 | cellular_component | mitochondrial inner membrane |
| J | 0005744 | cellular_component | TIM23 mitochondrial import inner membrane translocase complex |
| J | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| J | 0008320 | molecular_function | protein transmembrane transporter activity |
| J | 0030150 | biological_process | protein import into mitochondrial matrix |
| J | 0045271 | cellular_component | respiratory chain complex I |
| K | 0005739 | cellular_component | mitochondrion |
| K | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| K | 0009060 | biological_process | aerobic respiration |
| K | 0015990 | biological_process | electron transport coupled proton transport |
| K | 0016491 | molecular_function | oxidoreductase activity |
| K | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| K | 0045271 | cellular_component | respiratory chain complex I |
| K | 0046872 | molecular_function | metal ion binding |
| K | 0048038 | molecular_function | quinone binding |
| K | 0051536 | molecular_function | iron-sulfur cluster binding |
| K | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| L | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| L | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| L | 0022904 | biological_process | respiratory electron transport chain |
| L | 0031966 | cellular_component | mitochondrial membrane |
| L | 0042773 | biological_process | ATP synthesis coupled electron transport |
| L | 0045271 | cellular_component | respiratory chain complex I |
| L | 1902600 | biological_process | proton transmembrane transport |
| M | 0005739 | cellular_component | mitochondrion |
| M | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| M | 0045271 | cellular_component | respiratory chain complex I |
| M | 0046872 | molecular_function | metal ion binding |
| O | 0000035 | molecular_function | acyl binding |
| O | 0000036 | molecular_function | acyl carrier activity |
| O | 0005739 | cellular_component | mitochondrion |
| O | 0006629 | biological_process | lipid metabolic process |
| O | 0006631 | biological_process | fatty acid metabolic process |
| O | 0006633 | biological_process | fatty acid biosynthetic process |
| O | 0099128 | cellular_component | mitochondrial [2Fe-2S] assembly complex |
| P | 0005743 | cellular_component | mitochondrial inner membrane |
| P | 0022904 | biological_process | respiratory electron transport chain |
| P | 0045271 | cellular_component | respiratory chain complex I |
| Q | 0000035 | molecular_function | acyl binding |
| Q | 0000036 | molecular_function | acyl carrier activity |
| Q | 0005739 | cellular_component | mitochondrion |
| Q | 0006629 | biological_process | lipid metabolic process |
| Q | 0006631 | biological_process | fatty acid metabolic process |
| Q | 0006633 | biological_process | fatty acid biosynthetic process |
| Q | 0099128 | cellular_component | mitochondrial [2Fe-2S] assembly complex |
| R | 0005743 | cellular_component | mitochondrial inner membrane |
| R | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| R | 0022904 | biological_process | respiratory electron transport chain |
| R | 0045271 | cellular_component | respiratory chain complex I |
| U | 0005743 | cellular_component | mitochondrial inner membrane |
| U | 0006120 | biological_process | mitochondrial electron transport, NADH to ubiquinone |
| U | 0022904 | biological_process | respiratory electron transport chain |
| U | 0045271 | cellular_component | respiratory chain complex I |
| W | 0005739 | cellular_component | mitochondrion |
| W | 0005743 | cellular_component | mitochondrial inner membrane |
| W | 0016020 | cellular_component | membrane |
| W | 0022904 | biological_process | respiratory electron transport chain |
| W | 0045271 | cellular_component | respiratory chain complex I |
| X | 0045271 | cellular_component | respiratory chain complex I |
| Y | 0005739 | cellular_component | mitochondrion |
| Y | 0005743 | cellular_component | mitochondrial inner membrane |
| Y | 0016020 | cellular_component | membrane |
| Y | 0022900 | biological_process | electron transport chain |
| Y | 0022904 | biological_process | respiratory electron transport chain |
| Y | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
| Y | 0045271 | cellular_component | respiratory chain complex I |
| Z | 0005739 | cellular_component | mitochondrion |
| Z | 0032981 | biological_process | mitochondrial respiratory chain complex I assembly |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 9 |
| Details | binding site for residue SF4 A 801 |
| Chain | Residue |
| A | HIS129 |
| A | ASP132 |
| A | CYS133 |
| A | CYS136 |
| A | GLN138 |
| A | CYS142 |
| A | LEU144 |
| A | GLN145 |
| A | GLY236 |
| site_id | AC2 |
| Number of Residues | 8 |
| Details | binding site for residue SF4 A 802 |
| Chain | Residue |
| A | MET180 |
| A | CYS183 |
| A | CYS186 |
| A | THR187 |
| A | CYS189 |
| A | CYS233 |
| A | VAL235 |
| A | LEU238 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | binding site for residue FES A 803 |
| Chain | Residue |
| A | CYS69 |
| A | TYR70 |
| A | CYS80 |
| A | ARG81 |
| A | CYS83 |
| A | CYS97 |
| site_id | AC4 |
| Number of Residues | 8 |
| Details | binding site for residue SF4 B 501 |
| Chain | Residue |
| B | PRO225 |
| B | SER380 |
| B | CYS381 |
| B | GLY382 |
| B | GLN383 |
| B | CYS384 |
| B | CYS387 |
| B | CYS427 |
| site_id | AC5 |
| Number of Residues | 15 |
| Details | binding site for residue FMN B 502 |
| Chain | Residue |
| B | GLY88 |
| B | LYS97 |
| B | ASN118 |
| B | ASP120 |
| B | GLU121 |
| B | TYR206 |
| B | GLY209 |
| B | GLU210 |
| B | GLU211 |
| B | VAL244 |
| B | THR245 |
| B | ASN246 |
| B | THR249 |
| B | ALA428 |
| B | LEU429 |
| site_id | AC6 |
| Number of Residues | 13 |
| Details | binding site for residue NDP E 401 |
| Chain | Residue |
| E | ASN62 |
| E | GLY63 |
| E | PHE64 |
| E | LEU65 |
| E | ARG85 |
| E | LEU128 |
| E | GLY130 |
| E | ARG131 |
| E | PHE138 |
| E | PHE169 |
| E | PHE179 |
| E | LYS211 |
| E | PHE213 |
| site_id | AC7 |
| Number of Residues | 7 |
| Details | binding site for residue FES H 301 |
| Chain | Residue |
| H | CYS127 |
| H | CYS132 |
| H | CYS168 |
| H | LEU169 |
| H | ALA171 |
| H | CYS172 |
| H | MET177 |
| site_id | AC8 |
| Number of Residues | 16 |
| Details | binding site for residue 3PE I 501 |
| Chain | Residue |
| 1 | PRO184 |
| 1 | ILE188 |
| 1 | PHE190 |
| 1 | ILE191 |
| 1 | PHE202 |
| 1 | SER292 |
| 1 | TRP295 |
| 1 | VAL296 |
| 1 | PHE303 |
| 1 | PHE311 |
| 1 | LEU319 |
| C | ARG269 |
| I | THR75 |
| I | TYR77 |
| g | PHE28 |
| g | ILE32 |
| site_id | AC9 |
| Number of Residues | 10 |
| Details | binding site for residue SF4 I 502 |
| Chain | Residue |
| I | HIS118 |
| I | CYS140 |
| I | ILE145 |
| I | CYS169 |
| I | ILE170 |
| I | TYR171 |
| I | CYS172 |
| I | GLY173 |
| I | CYS175 |
| I | GLU186 |
| site_id | AD1 |
| Number of Residues | 6 |
| Details | binding site for residue SF4 I 503 |
| Chain | Residue |
| I | CYS130 |
| I | CYS133 |
| I | LYS134 |
| I | CYS136 |
| I | ILE147 |
| I | CYS179 |
| site_id | AD2 |
| Number of Residues | 7 |
| Details | binding site for residue 3PE J 201 |
| Chain | Residue |
| J | ARG89 |
| J | ASP93 |
| J | GLY94 |
| J | TRP95 |
| J | TRP134 |
| j | LMN101 |
| 4 | T7X505 |
| site_id | AD3 |
| Number of Residues | 16 |
| Details | binding site for residue LMN J 202 |
| Chain | Residue |
| 2 | LEU391 |
| 2 | TYR396 |
| 2 | ILE400 |
| 4 | PHE177 |
| 4 | VAL184 |
| 4 | ASP205 |
| J | TYR82 |
| J | LYS92 |
| J | ASP93 |
| J | HIS97 |
| J | GLY133 |
| J | TRP134 |
| J | ALA145 |
| J | THR162 |
| J | PHE163 |
| J | TRP164 |
| site_id | AD4 |
| Number of Residues | 10 |
| Details | binding site for residue 3PE J 203 |
| Chain | Residue |
| 2 | ILE265 |
| 5 | LEU606 |
| 5 | LEU620 |
| 5 | ILE623 |
| 5 | LEU630 |
| 5 | VAL634 |
| 5 | LEU646 |
| 5 | ILE652 |
| J | ALA43 |
| J | ARG47 |
| site_id | AD5 |
| Number of Residues | 7 |
| Details | binding site for residue LMN J 204 |
| Chain | Residue |
| J | VAL115 |
| J | PRO116 |
| a | LYS31 |
| j | TYR48 |
| j | THR49 |
| j | ARG50 |
| j | GLY53 |
| site_id | AD6 |
| Number of Residues | 8 |
| Details | binding site for residue SF4 K 301 |
| Chain | Residue |
| C | ARG141 |
| C | HIS226 |
| K | ALA84 |
| K | CYS85 |
| K | CYS86 |
| K | SER149 |
| K | CYS150 |
| K | CYS180 |
| site_id | AD7 |
| Number of Residues | 4 |
| Details | binding site for residue ZN M 201 |
| Chain | Residue |
| M | CYS97 |
| M | HIS110 |
| M | CYS125 |
| M | CYS128 |
| site_id | AD8 |
| Number of Residues | 16 |
| Details | binding site for residue ZMP O 201 |
| Chain | Residue |
| O | ASP65 |
| O | SER66 |
| O | LEU67 |
| P | THR25 |
| P | PHE32 |
| P | ILE56 |
| P | GLU59 |
| P | PHE60 |
| P | HIS63 |
| P | ARG64 |
| P | GLN72 |
| P | LEU75 |
| P | GLY79 |
| P | PHE96 |
| P | TYR99 |
| P | PHE100 |
| site_id | AD9 |
| Number of Residues | 14 |
| Details | binding site for residue ZMP Q 201 |
| Chain | Residue |
| Q | SER89 |
| Q | LEU90 |
| R | PHE7 |
| R | ASN11 |
| R | LYS12 |
| R | SER22 |
| R | LYS46 |
| R | PHE47 |
| R | ASN50 |
| R | ALA51 |
| R | ILE53 |
| R | LEU59 |
| R | THR66 |
| R | HIS69 |
| site_id | AE1 |
| Number of Residues | 17 |
| Details | binding site for residue 3PE S 501 |
| Chain | Residue |
| 4 | ASN15 |
| 4 | ARG16 |
| 4 | 3PE503 |
| S | ASN113 |
| b | PHE4 |
| b | LEU7 |
| b | SER11 |
| b | GLY12 |
| b | PHE15 |
| b | PHE19 |
| b | PRO28 |
| b | ALA29 |
| b | GLY30 |
| b | TYR36 |
| b | VAL37 |
| b | VAL41 |
| b | 3PE201 |
| site_id | AE2 |
| Number of Residues | 13 |
| Details | binding site for residue PLC W 201 |
| Chain | Residue |
| 1 | TRP295 |
| I | LYS76 |
| I | LEU79 |
| I | ALA81 |
| I | PHE84 |
| I | LEU91 |
| W | ARG26 |
| W | GLY27 |
| W | PHE28 |
| W | ARG29 |
| W | PRO30 |
| W | TYR33 |
| W | PLC202 |
| site_id | AE3 |
| Number of Residues | 8 |
| Details | binding site for residue PLC W 202 |
| Chain | Residue |
| I | TYR88 |
| W | ALA25 |
| W | ARG26 |
| W | GLY27 |
| W | PHE28 |
| W | TYR33 |
| W | PLC201 |
| Z | CDL201 |
| site_id | AE4 |
| Number of Residues | 22 |
| Details | binding site for residue CDL X 201 |
| Chain | Residue |
| 1 | TYR332 |
| 2 | ILE3 |
| 2 | LEU4 |
| 2 | CDL501 |
| 3 | ASN85 |
| 3 | TYR86 |
| 3 | THR89 |
| 3 | LEU92 |
| 6 | PHE160 |
| 6 | LEU163 |
| X | PHE28 |
| X | LYS29 |
| X | PHE87 |
| X | SER129 |
| X | SER130 |
| X | PRO154 |
| X | TRP155 |
| X | PHE158 |
| X | VAL159 |
| X | ASN160 |
| g | PRO37 |
| g | LEU41 |
| site_id | AE5 |
| Number of Residues | 12 |
| Details | binding site for residue CDL Z 201 |
| Chain | Residue |
| 1 | PHE291 |
| D | ALA2 |
| D | ILE3 |
| D | LEU8 |
| I | LEU91 |
| I | PHE95 |
| W | PLC202 |
| Z | SER17 |
| Z | TRP21 |
| Z | LEU24 |
| Z | ARG25 |
| Z | LEU28 |
| site_id | AE6 |
| Number of Residues | 13 |
| Details | binding site for residue 3PE a 201 |
| Chain | Residue |
| 5 | GLN162 |
| 5 | LYS165 |
| 5 | SER166 |
| 5 | LEU168 |
| 5 | SER169 |
| 5 | LEU172 |
| 5 | MET173 |
| 5 | PHE176 |
| 5 | LEU238 |
| 5 | ASN561 |
| 5 | ILE565 |
| a | PRO82 |
| a | ASP83 |
| site_id | AE7 |
| Number of Residues | 12 |
| Details | binding site for residue 3PE b 201 |
| Chain | Residue |
| 2 | TYR359 |
| 4 | LEU11 |
| 4 | PHE14 |
| 4 | ASN15 |
| 4 | LEU18 |
| 4 | LEU147 |
| 4 | 3PE501 |
| 4 | 3PE504 |
| S | 3PE501 |
| b | PHE19 |
| b | LYS23 |
| b | ALA29 |
| site_id | AE8 |
| Number of Residues | 9 |
| Details | binding site for residue 3PE i 101 |
| Chain | Residue |
| 4 | PRO370 |
| 4 | THR374 |
| 4 | ILE377 |
| 4 | CDL502 |
| 5 | HIS112 |
| 5 | ARG115 |
| i | SER14 |
| i | THR16 |
| i | GLY18 |
| site_id | AE9 |
| Number of Residues | 8 |
| Details | binding site for residue LMN j 101 |
| Chain | Residue |
| 4 | THR208 |
| 4 | MET219 |
| 4 | LEU272 |
| 4 | TYR273 |
| 4 | MET276 |
| J | 3PE201 |
| j | TYR72 |
| j | GLN73 |
| site_id | AF1 |
| Number of Residues | 8 |
| Details | binding site for residue PLC 1 401 |
| Chain | Residue |
| 1 | THR330 |
| 1 | PHE334 |
| W | GLY42 |
| W | PHE45 |
| W | TYR46 |
| W | LEU49 |
| W | GLN53 |
| g | TYR52 |
| site_id | AF2 |
| Number of Residues | 11 |
| Details | binding site for residue UQ9 1 402 |
| Chain | Residue |
| 1 | LEU16 |
| 1 | ALA20 |
| 1 | GLU26 |
| 1 | ALA50 |
| 1 | ASP53 |
| 1 | LEU57 |
| 1 | PHE228 |
| 1 | ARG297 |
| K | TRP77 |
| K | ILE106 |
| K | ARG108 |
| site_id | AF3 |
| Number of Residues | 10 |
| Details | binding site for residue PLC 1 403 |
| Chain | Residue |
| 1 | TYR21 |
| 1 | ASN40 |
| 1 | PHE41 |
| 1 | VAL42 |
| 1 | GLY43 |
| 1 | TYR44 |
| K | TRP70 |
| h | LEU24 |
| h | ASN25 |
| h | ILE27 |
| site_id | AF4 |
| Number of Residues | 15 |
| Details | binding site for residue CDL 2 501 |
| Chain | Residue |
| 2 | LEU4 |
| 2 | ILE7 |
| 2 | SER8 |
| 2 | MET15 |
| 3 | 3PE201 |
| X | LYS73 |
| X | VAL77 |
| X | THR79 |
| X | MET80 |
| X | PHE83 |
| X | CDL201 |
| g | ASN5 |
| g | PHE8 |
| g | TRP9 |
| g | TYR15 |
| site_id | AF5 |
| Number of Residues | 11 |
| Details | binding site for residue T7X 2 502 |
| Chain | Residue |
| 2 | SER437 |
| 2 | VAL438 |
| 2 | TYR441 |
| 2 | PSC503 |
| X | TRP59 |
| X | LEU60 |
| b | ARG25 |
| b | TYR32 |
| b | PHE38 |
| b | SER39 |
| b | ALA42 |
| site_id | AF6 |
| Number of Residues | 16 |
| Details | binding site for residue PSC 2 503 |
| Chain | Residue |
| 2 | LEU36 |
| 2 | SER40 |
| 2 | TYR43 |
| 2 | TYR67 |
| 2 | MET70 |
| 2 | TYR311 |
| 2 | THR314 |
| 2 | LEU378 |
| 2 | GLY453 |
| 2 | TYR456 |
| 2 | ILE460 |
| 2 | ILE463 |
| 2 | PHE464 |
| 2 | TYR467 |
| 2 | T7X502 |
| b | VAL53 |
| site_id | AF7 |
| Number of Residues | 15 |
| Details | binding site for residue T7X 2 504 |
| Chain | Residue |
| 2 | TYR170 |
| 2 | LEU199 |
| 2 | ILE202 |
| 2 | ALA203 |
| 2 | LEU206 |
| 2 | ASN256 |
| 2 | SER257 |
| 2 | LEU258 |
| 2 | VAL259 |
| 5 | ILE625 |
| 5 | VAL632 |
| 5 | LEU633 |
| 6 | VAL103 |
| 6 | SER107 |
| L | PHE12 |
| site_id | AF8 |
| Number of Residues | 16 |
| Details | binding site for residue 3PE 3 201 |
| Chain | Residue |
| 1 | GLY322 |
| 1 | LEU325 |
| 2 | CDL501 |
| 3 | ILE99 |
| 3 | VAL103 |
| 3 | ILE106 |
| 3 | ASN107 |
| 3 | ASN109 |
| g | ASN5 |
| g | SER19 |
| g | ARG23 |
| g | LEU26 |
| g | ALA29 |
| g | PHE30 |
| g | ALA31 |
| g | ILE34 |
| site_id | AF9 |
| Number of Residues | 11 |
| Details | binding site for residue T7X 3 202 |
| Chain | Residue |
| 1 | VAL55 |
| 3 | ILE23 |
| 3 | LEU24 |
| 3 | LEU25 |
| 3 | ALA26 |
| 3 | VAL27 |
| E | TRP305 |
| E | TRP306 |
| K | LEU64 |
| K | ILE203 |
| K | THR204 |
| site_id | AG1 |
| Number of Residues | 10 |
| Details | binding site for residue 3PE 4 501 |
| Chain | Residue |
| 2 | ALA358 |
| 2 | LEU362 |
| 4 | PHE14 |
| 4 | TYR28 |
| 4 | ASN112 |
| 4 | THR116 |
| 4 | ALA143 |
| 4 | PRO146 |
| 4 | 3PE503 |
| b | 3PE201 |
| site_id | AG2 |
| Number of Residues | 21 |
| Details | binding site for residue CDL 4 502 |
| Chain | Residue |
| 4 | THR87 |
| 4 | LEU90 |
| 4 | PHE337 |
| 4 | GLN371 |
| 4 | TYR375 |
| 4 | ILE448 |
| 4 | LYS451 |
| 4 | ASN455 |
| 4 | ILE463 |
| 4 | ILE464 |
| 4 | MET471 |
| 5 | CYS13 |
| S | TYR169 |
| S | ALA173 |
| S | LEU176 |
| S | LEU180 |
| i | 3PE101 |
| n | TYR20 |
| n | LYS23 |
| n | TRP24 |
| n | LEU31 |
| site_id | AG3 |
| Number of Residues | 11 |
| Details | binding site for residue 3PE 4 503 |
| Chain | Residue |
| 2 | PHE452 |
| 2 | PHE454 |
| 4 | THR4 |
| 4 | PHE60 |
| 4 | ASN64 |
| 4 | PHE66 |
| 4 | LEU68 |
| 4 | 3PE501 |
| 4 | 3PE504 |
| S | 3PE501 |
| b | GLY9 |
| site_id | AG4 |
| Number of Residues | 13 |
| Details | binding site for residue 3PE 4 504 |
| Chain | Residue |
| 2 | PRO376 |
| 4 | LEU3 |
| 4 | PHE38 |
| 4 | ASN56 |
| 4 | PHE57 |
| 4 | LEU68 |
| 4 | VAL124 |
| 4 | LEU126 |
| 4 | LEU127 |
| 4 | TRP130 |
| 4 | LEU140 |
| 4 | 3PE503 |
| b | 3PE201 |
| site_id | AG5 |
| Number of Residues | 7 |
| Details | binding site for residue T7X 4 505 |
| Chain | Residue |
| 4 | PHE165 |
| 4 | TYR166 |
| 4 | MET169 |
| 5 | PRO589 |
| 5 | CDL701 |
| C | ALA36 |
| J | 3PE201 |
| site_id | AG6 |
| Number of Residues | 14 |
| Details | binding site for residue CDL 5 701 |
| Chain | Residue |
| 4 | T7X505 |
| 5 | ARG586 |
| 5 | LEU587 |
| 5 | GLY591 |
| 5 | ILE592 |
| 5 | ARG594 |
| 5 | LEU595 |
| 5 | SER655 |
| J | PRO116 |
| J | ALA117 |
| J | GLY120 |
| J | TRP121 |
| J | LEU124 |
| j | TYR48 |
| site_id | AG7 |
| Number of Residues | 4 |
| Details | binding site for residue PLC 5 702 |
| Chain | Residue |
| 5 | LEU64 |
| 5 | PHE65 |
| i | TYR51 |
| n | TYR35 |
| site_id | AG8 |
| Number of Residues | 5 |
| Details | binding site for residue PLC 5 703 |
| Chain | Residue |
| 5 | LYS431 |
| 5 | PHE536 |
| 5 | ASN537 |
| 5 | TYR547 |
| R | TRP29 |
Functional Information from PROSITE/UniProt
| site_id | PS00012 |
| Number of Residues | 16 |
| Details | PHOSPHOPANTETHEINE Phosphopantetheine attachment site. DLGLDSLDVVEVVMAI |
| Chain | Residue | Details |
| Q | ASP84-ILE99 | |
| O | ASP61-ILE76 |
| site_id | PS00133 |
| Number of Residues | 11 |
| Details | CARBOXYPEPT_ZN_2 Zinc carboxypeptidases, zinc-binding region 2 signature. HSIAGLFiFPW |
| Chain | Residue | Details |
| X | HIS145-TRP155 |
| site_id | PS00198 |
| Number of Residues | 12 |
| Details | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiACKlCEaICP |
| Chain | Residue | Details |
| I | CYS130-PRO141 | |
| I | CYS169-PRO180 |
| site_id | PS00535 |
| Number of Residues | 12 |
| Details | COMPLEX1_49K Respiratory chain NADH dehydrogenase 49 Kd subunit signature. LHRGtEKLiEyK |
| Chain | Residue | Details |
| C | LEU119-LYS130 |
| site_id | PS00542 |
| Number of Residues | 22 |
| Details | COMPLEX1_30K Respiratory chain NADH dehydrogenase 30 Kd subunit signature. EREayDMYgvffegHpdlRrIM |
| Chain | Residue | Details |
| G | GLU179-MET200 |
| site_id | PS00641 |
| Number of Residues | 18 |
| Details | COMPLEX1_75K_1 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. PryCYhdklaiaGnCRmC |
| Chain | Residue | Details |
| A | PRO66-CYS83 |
| site_id | PS00642 |
| Number of Residues | 13 |
| Details | COMPLEX1_75K_2 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. CPvCDqGGeCdLQ |
| Chain | Residue | Details |
| A | CYS133-GLN145 |
| site_id | PS00643 |
| Number of Residues | 11 |
| Details | COMPLEX1_75K_3 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. RCIhCtRCVrF |
| Chain | Residue | Details |
| A | ARG182-PHE192 |
| site_id | PS00644 |
| Number of Residues | 16 |
| Details | COMPLEX1_51K_1 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. GMGAYVCGEETSLIES |
| Chain | Residue | Details |
| B | GLY202-SER217 |
| site_id | PS00645 |
| Number of Residues | 12 |
| Details | COMPLEX1_51K_2 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. ESCGqCtPCReG |
| Chain | Residue | Details |
| B | GLU379-GLY390 |
| site_id | PS00667 |
| Number of Residues | 16 |
| Details | COMPLEX1_ND1_1 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. GLLQaFaDAVKLLlKE |
| Chain | Residue | Details |
| 1 | GLY46-GLU61 |
| site_id | PS00668 |
| Number of Residues | 14 |
| Details | COMPLEX1_ND1_2 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. PFDLTESEseLVa.G |
| Chain | Residue | Details |
| 1 | PRO201-GLY214 |
| site_id | PS01099 |
| Number of Residues | 19 |
| Details | COMPLEX1_24K Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. DnlFTlseveCLGaCvnAP |
| Chain | Residue | Details |
| H | ASP158-PRO176 |
| site_id | PS01150 |
| Number of Residues | 17 |
| Details | COMPLEX1_20K Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. GcDRIVPVDVYvPgCPP |
| Chain | Residue | Details |
| K | GLY166-PRO182 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI16 |
| Number of Residues | 1123 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |






