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6XU0

Archaeoglobus fulgidus Argonaute protein with DNA oligoduplex 5'-pATCGTGGCCACGAT

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003723molecular_functionRNA binding
A0046872molecular_functionmetal ion binding
B0003676molecular_functionnucleic acid binding
B0003677molecular_functionDNA binding
B0003723molecular_functionRNA binding
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MG A 501
ChainResidue
AGLN159
ALEU427
RDA1
RDC3
RHOH103

site_idAC2
Number of Residues2
Detailsbinding site for residue CAC A 502
ChainResidue
ATYR360
ATYR361

site_idAC3
Number of Residues4
Detailsbinding site for residue CAC A 503
ChainResidue
ATYR410
BLYS45
AGLY408
AGLY409

site_idAC4
Number of Residues5
Detailsbinding site for residue BME A 504
ChainResidue
AILE213
ASER214
AILE412
AHOH710
AHOH729

site_idAC5
Number of Residues7
Detailsbinding site for residue GOL A 505
ChainResidue
ALYS227
ASER228
ALYS231
ALYS232
AHOH653
AHOH667
AHOH769

site_idAC6
Number of Residues2
Detailsbinding site for residue PG0 B 501
ChainResidue
APHE298
BTYR311

site_idAC7
Number of Residues5
Detailsbinding site for residue MG B 502
ChainResidue
BGLN159
BLEU427
PDA1
PDC3
PHOH105

site_idAC8
Number of Residues6
Detailsbinding site for residue CAC B 503
ChainResidue
ALYS45
BLYS125
BGLY408
BGLY409
BTYR410
BHOH622

site_idAC9
Number of Residues6
Detailsbinding site for residue BME B 504
ChainResidue
BSER214
BILE401
BPRO411
BILE412
BASN413
BHOH641

site_idAD1
Number of Residues4
Detailsbinding site for residue K B 505
ChainResidue
BSER136
BLYS163
BTRP425
BHOH731

site_idAD2
Number of Residues9
Detailsbinding site for residue GOL B 506
ChainResidue
ALYS97
AASP101
BPRO42
BSER43
BLEU44
BHIS77
BILE78
BHIS79
BHOH603

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0007744|PDB:1YTU, ECO:0007744|PDB:2BGG, ECO:0007744|PDB:2W42
ChainResidueDetails
AGLN159
ALEU427
BGLN159
BLEU427

226262

PDB entries from 2024-10-16

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