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6XRO

Crystal structure of GlpG in complex with peptide boronate inhibitor, Ac-KRFRSMQYSA-B(OH)2

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0006508biological_processproteolysis
A0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues12
Detailsbinding site for residue B2A B 501
ChainResidue
AGLY198
ANA304
AHOH623
BSER500
AGLY199
ALEU200
ASER201
AGLY202
AALA250
AALA253
AHIS254
ANA303

site_idAC2
Number of Residues3
Detailsbinding site for residue CL A 301
ChainResidue
AGLN189
ASER193
AASN251

site_idAC3
Number of Residues5
Detailsbinding site for residue CL A 302
ChainResidue
AARG92
AALA93
ATRP159
AGLN226
AGLY228

site_idAC4
Number of Residues6
Detailsbinding site for residue NA A 303
ChainResidue
ASER201
AMET249
AHIS254
BB2A501
AHOH622
AHOH630

site_idAC5
Number of Residues4
Detailsbinding site for residue NA A 304
ChainResidue
AHIS150
AASN154
BB2A501
AHOH636

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI3
Number of Residues1
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"17051161","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"17099694","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"17190827","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"17277078","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsActive site: {"evidences":[{"source":"PubMed","id":"17051161","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"17099694","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"17190827","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"17277078","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues20
DetailsTransmembrane: {"description":"Helical; Name=1","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues30
DetailsTopological domain: {"description":"Periplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues20
DetailsTransmembrane: {"description":"Helical; Name=2","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues14
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues20
DetailsTransmembrane: {"description":"Helical; Name=3","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues20
DetailsTransmembrane: {"description":"Helical; Name=4","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues22
DetailsTransmembrane: {"description":"Helical; Name=5","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues22
DetailsTransmembrane: {"description":"Helical; Name=6","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

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