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6XM7

Crystal structure of DCA-S bound to Co-LSD4 from Sphingobium sp. strain SYK-6

Functional Information from GO Data
ChainGOidnamespacecontents
A0010436molecular_functioncarotenoid dioxygenase activity
A0016121biological_processcarotene catabolic process
A0016702molecular_functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
A0046872molecular_functionmetal ion binding
A0051213molecular_functiondioxygenase activity
Functional Information from PDB Data
site_idAC1
Number of Residues19
Detailsbinding site for residue V5M A 501
ChainResidue
APHE59
APHE307
AGLU353
APHE354
ASER386
AALA387
APHE390
AMET392
APHE473
ALEU475
AHOH885
ATYR101
AASN120
ATHR121
ALYS134
AHIS218
ASER283
AHIS284
AMET306

site_idAC2
Number of Residues8
Detailsbinding site for residue DMS A 502
ChainResidue
AGLU35
ALEU36
AASN37
APRO423
AARG424
ATRP434
ATRP479
AASN481

site_idAC3
Number of Residues4
Detailsbinding site for residue DMS A 503
ChainResidue
AASP55
AASP56
AHOH626
AHOH763

site_idAC4
Number of Residues5
Detailsbinding site for residue DMS A 504
ChainResidue
AARG360
AALA428
AGLU430
AHOH610
AHOH648

site_idAC5
Number of Residues4
Detailsbinding site for residue DMS A 505
ChainResidue
AGLY113
AGLU114
AGLN162
AHOH1048

site_idAC6
Number of Residues5
Detailsbinding site for residue DMS A 506
ChainResidue
AGLU29
APRO461
AVAL462
AALA463
ATHR464

site_idAC7
Number of Residues5
Detailsbinding site for residue DMS A 507
ChainResidue
AVAL313
AHIS314
ACO514
AHOH625
AHOH954

site_idAC8
Number of Residues5
Detailsbinding site for residue DMS A 508
ChainResidue
ATHR141
AGLY151
APHE152
AGLU153
AHOH1254

site_idAC9
Number of Residues3
Detailsbinding site for residue DMS A 509
ChainResidue
AGLY113
ATYR115
AHOH636

site_idAD1
Number of Residues5
Detailsbinding site for residue CO A 510
ChainResidue
AHIS167
AHIS218
AHIS284
AHIS476
AHOH885

site_idAD2
Number of Residues4
Detailsbinding site for residue CO A 511
ChainResidue
AGLU373
ACYS394
AHIS407
AHOH634

site_idAD3
Number of Residues5
Detailsbinding site for residue CO A 512
ChainResidue
AASP448
AHIS466
AHOH682
AHOH862
AHOH957

site_idAD4
Number of Residues2
Detailsbinding site for residue CO A 513
ChainResidue
AASN481
AHOH1152

site_idAD5
Number of Residues3
Detailsbinding site for residue CO A 514
ChainResidue
AHIS314
ADMS507
AHOH625

site_idAD6
Number of Residues4
Detailsbinding site for residue MG A 515
ChainResidue
AHOH783
AHOH928
AHOH980
AHOH1113

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PDB entries from 2024-07-17

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