Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6WUI

Crystal Structure of mutant S. pombe Rai1 (E150S/E199Q/E239Q) in complex with 3'-FADP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000448biological_processcleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A0000956biological_processnuclear-transcribed mRNA catabolic process
A0003723molecular_functionRNA binding
A0004518molecular_functionnuclease activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005829cellular_componentcytosol
A0006397biological_processmRNA processing
A0019003molecular_functionGDP binding
A0034353molecular_functionmRNA 5'-diphosphatase activity
A0046872molecular_functionmetal ion binding
A0090730cellular_componentLas1 complex
A0110152molecular_functionRNA NAD+-cap (NAD+-forming) hydrolase activity
A0110155biological_processNAD-cap decapping
A0140432molecular_function5'-hydroxyl dinucleotide hydrolase activity
A1990174molecular_functionphosphodiesterase decapping endonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues33
Detailsbinding site for residue UBG A 401
ChainResidue
APRO65
AGLU128
ATHR130
AASN138
ATYR147
AGLN180
AALA197
AGLY198
AGLN199
AGLN239
ALYS241
ALYS66
AGLN263
AHOH503
AHOH505
AHOH509
AHOH519
AHOH520
AHOH531
AHOH534
AHOH538
AHOH550
ASER67
AHOH555
AHOH564
AHOH566
AHOH611
AASP68
APRO69
AASP70
ATRP93
AARG94
AGLY95

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:O70348
ChainResidueDetails
AARG33
ATRP93
ACYS182
AGLN199
ALYS241
AGLN263

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:19194460
ChainResidueDetails
ASER150
AASP201
AGLN239
ALEU240

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000269|PubMed:18257517
ChainResidueDetails
ASER218

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon