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6WNK

Macrocyclic peptides TDI5575 that selectively inhibit the Mycobacterium tuberculosis proteasome

Functional Information from GO Data
ChainGOidnamespacecontents
A0000502cellular_componentproteasome complex
A0004175molecular_functionendopeptidase activity
A0004298molecular_functionthreonine-type endopeptidase activity
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005839cellular_componentproteasome core complex
A0005886cellular_componentplasma membrane
A0009274cellular_componentpeptidoglycan-based cell wall
A0010498biological_processproteasomal protein catabolic process
A0019773cellular_componentproteasome core complex, alpha-subunit complex
A0019941biological_processmodification-dependent protein catabolic process
A0030682biological_processsymbiont-mediated perturbation of host defenses
A0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
A0051603biological_processproteolysis involved in protein catabolic process
B0000502cellular_componentproteasome complex
B0004175molecular_functionendopeptidase activity
B0004298molecular_functionthreonine-type endopeptidase activity
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0005839cellular_componentproteasome core complex
B0005886cellular_componentplasma membrane
B0009274cellular_componentpeptidoglycan-based cell wall
B0010498biological_processproteasomal protein catabolic process
B0019773cellular_componentproteasome core complex, alpha-subunit complex
B0019941biological_processmodification-dependent protein catabolic process
B0030682biological_processsymbiont-mediated perturbation of host defenses
B0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
B0051603biological_processproteolysis involved in protein catabolic process
C0000502cellular_componentproteasome complex
C0004175molecular_functionendopeptidase activity
C0004298molecular_functionthreonine-type endopeptidase activity
C0005515molecular_functionprotein binding
C0005737cellular_componentcytoplasm
C0005839cellular_componentproteasome core complex
C0005886cellular_componentplasma membrane
C0009274cellular_componentpeptidoglycan-based cell wall
C0010498biological_processproteasomal protein catabolic process
C0019773cellular_componentproteasome core complex, alpha-subunit complex
C0019941biological_processmodification-dependent protein catabolic process
C0030682biological_processsymbiont-mediated perturbation of host defenses
C0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
C0051603biological_processproteolysis involved in protein catabolic process
D0000502cellular_componentproteasome complex
D0004175molecular_functionendopeptidase activity
D0004298molecular_functionthreonine-type endopeptidase activity
D0005515molecular_functionprotein binding
D0005737cellular_componentcytoplasm
D0005839cellular_componentproteasome core complex
D0005886cellular_componentplasma membrane
D0009274cellular_componentpeptidoglycan-based cell wall
D0010498biological_processproteasomal protein catabolic process
D0019773cellular_componentproteasome core complex, alpha-subunit complex
D0019941biological_processmodification-dependent protein catabolic process
D0030682biological_processsymbiont-mediated perturbation of host defenses
D0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
D0051603biological_processproteolysis involved in protein catabolic process
E0000502cellular_componentproteasome complex
E0004175molecular_functionendopeptidase activity
E0004298molecular_functionthreonine-type endopeptidase activity
E0005515molecular_functionprotein binding
E0005737cellular_componentcytoplasm
E0005839cellular_componentproteasome core complex
E0005886cellular_componentplasma membrane
E0009274cellular_componentpeptidoglycan-based cell wall
E0010498biological_processproteasomal protein catabolic process
E0019773cellular_componentproteasome core complex, alpha-subunit complex
E0019941biological_processmodification-dependent protein catabolic process
E0030682biological_processsymbiont-mediated perturbation of host defenses
E0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
E0051603biological_processproteolysis involved in protein catabolic process
F0000502cellular_componentproteasome complex
F0004175molecular_functionendopeptidase activity
F0004298molecular_functionthreonine-type endopeptidase activity
F0005515molecular_functionprotein binding
F0005737cellular_componentcytoplasm
F0005839cellular_componentproteasome core complex
F0005886cellular_componentplasma membrane
F0009274cellular_componentpeptidoglycan-based cell wall
F0010498biological_processproteasomal protein catabolic process
F0019773cellular_componentproteasome core complex, alpha-subunit complex
F0019941biological_processmodification-dependent protein catabolic process
F0030682biological_processsymbiont-mediated perturbation of host defenses
F0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
F0051603biological_processproteolysis involved in protein catabolic process
G0000502cellular_componentproteasome complex
G0004175molecular_functionendopeptidase activity
G0004298molecular_functionthreonine-type endopeptidase activity
G0005515molecular_functionprotein binding
G0005737cellular_componentcytoplasm
G0005839cellular_componentproteasome core complex
G0005886cellular_componentplasma membrane
G0009274cellular_componentpeptidoglycan-based cell wall
G0010498biological_processproteasomal protein catabolic process
G0019773cellular_componentproteasome core complex, alpha-subunit complex
G0019941biological_processmodification-dependent protein catabolic process
G0030682biological_processsymbiont-mediated perturbation of host defenses
G0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
G0051603biological_processproteolysis involved in protein catabolic process
H0004298molecular_functionthreonine-type endopeptidase activity
H0005839cellular_componentproteasome core complex
H0010498biological_processproteasomal protein catabolic process
H0051603biological_processproteolysis involved in protein catabolic process
I0004298molecular_functionthreonine-type endopeptidase activity
I0005839cellular_componentproteasome core complex
I0010498biological_processproteasomal protein catabolic process
I0051603biological_processproteolysis involved in protein catabolic process
J0004298molecular_functionthreonine-type endopeptidase activity
J0005839cellular_componentproteasome core complex
J0010498biological_processproteasomal protein catabolic process
J0051603biological_processproteolysis involved in protein catabolic process
K0004298molecular_functionthreonine-type endopeptidase activity
K0005839cellular_componentproteasome core complex
K0010498biological_processproteasomal protein catabolic process
K0051603biological_processproteolysis involved in protein catabolic process
L0004298molecular_functionthreonine-type endopeptidase activity
L0005839cellular_componentproteasome core complex
L0010498biological_processproteasomal protein catabolic process
L0051603biological_processproteolysis involved in protein catabolic process
M0004298molecular_functionthreonine-type endopeptidase activity
M0005839cellular_componentproteasome core complex
M0010498biological_processproteasomal protein catabolic process
M0051603biological_processproteolysis involved in protein catabolic process
N0004298molecular_functionthreonine-type endopeptidase activity
N0005839cellular_componentproteasome core complex
N0010498biological_processproteasomal protein catabolic process
N0051603biological_processproteolysis involved in protein catabolic process
O0000502cellular_componentproteasome complex
O0004175molecular_functionendopeptidase activity
O0004298molecular_functionthreonine-type endopeptidase activity
O0005515molecular_functionprotein binding
O0005737cellular_componentcytoplasm
O0005839cellular_componentproteasome core complex
O0005886cellular_componentplasma membrane
O0009274cellular_componentpeptidoglycan-based cell wall
O0010498biological_processproteasomal protein catabolic process
O0019773cellular_componentproteasome core complex, alpha-subunit complex
O0019941biological_processmodification-dependent protein catabolic process
O0030682biological_processsymbiont-mediated perturbation of host defenses
O0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
O0051603biological_processproteolysis involved in protein catabolic process
P0000502cellular_componentproteasome complex
P0004175molecular_functionendopeptidase activity
P0004298molecular_functionthreonine-type endopeptidase activity
P0005515molecular_functionprotein binding
P0005737cellular_componentcytoplasm
P0005839cellular_componentproteasome core complex
P0005886cellular_componentplasma membrane
P0009274cellular_componentpeptidoglycan-based cell wall
P0010498biological_processproteasomal protein catabolic process
P0019773cellular_componentproteasome core complex, alpha-subunit complex
P0019941biological_processmodification-dependent protein catabolic process
P0030682biological_processsymbiont-mediated perturbation of host defenses
P0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
P0051603biological_processproteolysis involved in protein catabolic process
Q0000502cellular_componentproteasome complex
Q0004175molecular_functionendopeptidase activity
Q0004298molecular_functionthreonine-type endopeptidase activity
Q0005515molecular_functionprotein binding
Q0005737cellular_componentcytoplasm
Q0005839cellular_componentproteasome core complex
Q0005886cellular_componentplasma membrane
Q0009274cellular_componentpeptidoglycan-based cell wall
Q0010498biological_processproteasomal protein catabolic process
Q0019773cellular_componentproteasome core complex, alpha-subunit complex
Q0019941biological_processmodification-dependent protein catabolic process
Q0030682biological_processsymbiont-mediated perturbation of host defenses
Q0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
Q0051603biological_processproteolysis involved in protein catabolic process
R0000502cellular_componentproteasome complex
R0004175molecular_functionendopeptidase activity
R0004298molecular_functionthreonine-type endopeptidase activity
R0005515molecular_functionprotein binding
R0005737cellular_componentcytoplasm
R0005839cellular_componentproteasome core complex
R0005886cellular_componentplasma membrane
R0009274cellular_componentpeptidoglycan-based cell wall
R0010498biological_processproteasomal protein catabolic process
R0019773cellular_componentproteasome core complex, alpha-subunit complex
R0019941biological_processmodification-dependent protein catabolic process
R0030682biological_processsymbiont-mediated perturbation of host defenses
R0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
R0051603biological_processproteolysis involved in protein catabolic process
S0000502cellular_componentproteasome complex
S0004175molecular_functionendopeptidase activity
S0004298molecular_functionthreonine-type endopeptidase activity
S0005515molecular_functionprotein binding
S0005737cellular_componentcytoplasm
S0005839cellular_componentproteasome core complex
S0005886cellular_componentplasma membrane
S0009274cellular_componentpeptidoglycan-based cell wall
S0010498biological_processproteasomal protein catabolic process
S0019773cellular_componentproteasome core complex, alpha-subunit complex
S0019941biological_processmodification-dependent protein catabolic process
S0030682biological_processsymbiont-mediated perturbation of host defenses
S0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
S0051603biological_processproteolysis involved in protein catabolic process
T0000502cellular_componentproteasome complex
T0004175molecular_functionendopeptidase activity
T0004298molecular_functionthreonine-type endopeptidase activity
T0005515molecular_functionprotein binding
T0005737cellular_componentcytoplasm
T0005839cellular_componentproteasome core complex
T0005886cellular_componentplasma membrane
T0009274cellular_componentpeptidoglycan-based cell wall
T0010498biological_processproteasomal protein catabolic process
T0019773cellular_componentproteasome core complex, alpha-subunit complex
T0019941biological_processmodification-dependent protein catabolic process
T0030682biological_processsymbiont-mediated perturbation of host defenses
T0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
T0051603biological_processproteolysis involved in protein catabolic process
U0000502cellular_componentproteasome complex
U0004175molecular_functionendopeptidase activity
U0004298molecular_functionthreonine-type endopeptidase activity
U0005515molecular_functionprotein binding
U0005737cellular_componentcytoplasm
U0005839cellular_componentproteasome core complex
U0005886cellular_componentplasma membrane
U0009274cellular_componentpeptidoglycan-based cell wall
U0010498biological_processproteasomal protein catabolic process
U0019773cellular_componentproteasome core complex, alpha-subunit complex
U0019941biological_processmodification-dependent protein catabolic process
U0030682biological_processsymbiont-mediated perturbation of host defenses
U0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
U0051603biological_processproteolysis involved in protein catabolic process
V0004298molecular_functionthreonine-type endopeptidase activity
V0005839cellular_componentproteasome core complex
V0010498biological_processproteasomal protein catabolic process
V0051603biological_processproteolysis involved in protein catabolic process
W0004298molecular_functionthreonine-type endopeptidase activity
W0005839cellular_componentproteasome core complex
W0010498biological_processproteasomal protein catabolic process
W0051603biological_processproteolysis involved in protein catabolic process
X0004298molecular_functionthreonine-type endopeptidase activity
X0005839cellular_componentproteasome core complex
X0010498biological_processproteasomal protein catabolic process
X0051603biological_processproteolysis involved in protein catabolic process
Y0004298molecular_functionthreonine-type endopeptidase activity
Y0005839cellular_componentproteasome core complex
Y0010498biological_processproteasomal protein catabolic process
Y0051603biological_processproteolysis involved in protein catabolic process
Z0004298molecular_functionthreonine-type endopeptidase activity
Z0005839cellular_componentproteasome core complex
Z0010498biological_processproteasomal protein catabolic process
Z0051603biological_processproteolysis involved in protein catabolic process
a0004298molecular_functionthreonine-type endopeptidase activity
a0005839cellular_componentproteasome core complex
a0010498biological_processproteasomal protein catabolic process
a0051603biological_processproteolysis involved in protein catabolic process
b0004298molecular_functionthreonine-type endopeptidase activity
b0005839cellular_componentproteasome core complex
b0010498biological_processproteasomal protein catabolic process
b0051603biological_processproteolysis involved in protein catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues19
Detailsbinding site for residue U5Y H 301
ChainResidue
HTHR1
HALA49
HALA52
HCIT302
HHOH431
HHOH450
ISER122
IASP124
IGLY128
ITRP129
IHOH440
HSER20
HTHR21
HGLN22
HSER27
HVAL31
HILE45
HGLY47
HTHR48

site_idAC2
Number of Residues6
Detailsbinding site for residue CIT H 302
ChainResidue
HTHR1
HALA46
HGLY47
HGLY140
HSER141
HU5Y301

site_idAC3
Number of Residues17
Detailsbinding site for residue U5Y I 301
ChainResidue
ITHR1
ISER20
ITHR21
IGLN22
ISER27
IVAL31
IILE45
IGLY47
ITHR48
IALA49
IALA52
ICIT302
IHOH435
JASP124
JGLY128
JTRP129
JASN130

site_idAC4
Number of Residues6
Detailsbinding site for residue CIT I 302
ChainResidue
ITHR1
IGLY47
ISER141
IALA180
IU5Y301
IHOH478

site_idAC5
Number of Residues17
Detailsbinding site for residue U5Y J 301
ChainResidue
JTHR1
JSER20
JTHR21
JGLN22
JSER27
JVAL31
JILE45
JGLY47
JTHR48
JALA49
JALA52
JCIT302
KASP124
KGLY128
KTRP129
KASN130
KHOH419

site_idAC6
Number of Residues6
Detailsbinding site for residue CIT J 302
ChainResidue
JTHR1
JALA46
JGLY47
JGLY140
JSER141
JU5Y301

site_idAC7
Number of Residues19
Detailsbinding site for residue U5Y K 301
ChainResidue
KTHR1
KSER20
KTHR21
KGLN22
KSER27
KVAL31
KILE45
KGLY47
KTHR48
KALA49
KALA52
KCIT302
KHOH431
LSER122
LPHE123
LASP124
LGLY128
LTRP129
LHOH406

site_idAC8
Number of Residues5
Detailsbinding site for residue CIT K 302
ChainResidue
KTHR1
KGLY47
KGLY140
KSER141
KU5Y301

site_idAC9
Number of Residues17
Detailsbinding site for residue U5Y L 301
ChainResidue
LSER27
LVAL31
LLYS33
LILE45
LGLY47
LTHR48
LALA49
LALA52
LCIT302
MSER122
MASP124
MTRP129
MASN130
LTHR1
LSER20
LTHR21
LGLN22

site_idAD1
Number of Residues6
Detailsbinding site for residue CIT L 302
ChainResidue
LTHR1
LALA46
LGLY47
LSER141
LU5Y301
bASN24

site_idAD2
Number of Residues17
Detailsbinding site for residue U5Y M 301
ChainResidue
MTHR1
MSER20
MTHR21
MGLN22
MSER27
MVAL31
MILE45
MGLY47
MTHR48
MALA49
MALA52
MCIT302
NSER122
NASP124
NTRP129
NASN130
NHOH422

site_idAD3
Number of Residues7
Detailsbinding site for residue CIT M 302
ChainResidue
MTHR1
MALA46
MGLY47
MSER141
MALA180
MU5Y301
aASN24

site_idAD4
Number of Residues19
Detailsbinding site for residue U5Y N 301
ChainResidue
HSER122
HASP124
HGLY128
HTRP129
HASN130
HHOH425
NTHR1
NSER20
NTHR21
NGLN22
NSER27
NVAL31
NILE45
NGLY47
NTHR48
NALA49
NALA52
NCIT302
NHOH435

site_idAD5
Number of Residues7
Detailsbinding site for residue CIT N 302
ChainResidue
NTHR1
NALA46
NGLY47
NLEU101
NSER141
NU5Y301
ZASN24

site_idAD6
Number of Residues2
Detailsbinding site for residue DMF O 301
ChainResidue
OGLY77
OTHR106

site_idAD7
Number of Residues4
Detailsbinding site for residue DMF P 301
ChainResidue
PGLY77
PVAL102
PTYR103
PTHR106

site_idAD8
Number of Residues4
Detailsbinding site for residue DMF Q 301
ChainResidue
QGLY77
QGLY78
QTYR103
QTHR106

site_idAD9
Number of Residues6
Detailsbinding site for residue DMF R 301
ChainResidue
RTYR35
RALA36
RGLY38
RALA128
RLYS134
RALA215

site_idAE1
Number of Residues8
Detailsbinding site for residue DMF R 302
ChainResidue
QARG97
QASN101
RLEU50
RGLN51
RPHE68
RARG75
RARG76
YLEU69

site_idAE2
Number of Residues2
Detailsbinding site for residue DMF S 301
ChainResidue
SGLY77
STHR106

site_idAE3
Number of Residues18
Detailsbinding site for residue U5Y V 301
ChainResidue
VTHR1
VARG19
VSER20
VTHR21
VGLN22
VSER27
VVAL31
VILE45
VGLY47
VTHR48
VALA49
VALA52
VCIT302
WSER122
WASP124
WTRP129
WASN130
WHOH424

site_idAE4
Number of Residues8
Detailsbinding site for residue CIT V 302
ChainResidue
KASN24
VTHR1
VTHR21
VALA46
VGLY47
VSER141
VALA180
VU5Y301

site_idAE5
Number of Residues4
Detailsbinding site for residue DMF W 301
ChainResidue
OASP90
VARG57
WALA77
WTRP129

site_idAE6
Number of Residues20
Detailsbinding site for residue U5Y W 302
ChainResidue
WTHR1
WSER20
WTHR21
WGLN22
WSER27
WVAL31
WILE45
WGLY47
WTHR48
WALA49
WALA52
WCIT303
WHOH442
WHOH458
XSER122
XASP124
XGLY128
XTRP129
XASN130
XHOH434

site_idAE7
Number of Residues6
Detailsbinding site for residue CIT W 303
ChainResidue
WTHR1
WALA46
WGLY47
WGLY140
WSER141
WU5Y302

site_idAE8
Number of Residues3
Detailsbinding site for residue DMF X 301
ChainResidue
XTHR21
XGLY23
XU5Y302

site_idAE9
Number of Residues23
Detailsbinding site for residue U5Y X 302
ChainResidue
XTHR1
XSER20
XTHR21
XGLN22
XSER27
XVAL31
XLYS33
XILE45
XGLY47
XTHR48
XALA49
XALA52
XDMF301
XCIT303
XHOH407
XHOH478
XHOH482
YSER122
YASP124
YGLY128
YTRP129
YASN130
YHOH416

site_idAF1
Number of Residues7
Detailsbinding site for residue CIT X 303
ChainResidue
XTHR1
XALA46
XGLY47
XGLY140
XSER141
XU5Y302
XHOH482

site_idAF2
Number of Residues17
Detailsbinding site for residue U5Y Y 301
ChainResidue
YTHR1
YSER20
YTHR21
YGLN22
YSER27
YVAL31
YILE45
YGLY47
YTHR48
YALA49
YALA52
YCIT302
YHOH456
ZSER122
ZASP124
ZTRP129
ZHOH1223

site_idAF3
Number of Residues5
Detailsbinding site for residue CIT Y 302
ChainResidue
HASN24
YTHR1
YGLY47
YSER141
YU5Y301

site_idAF4
Number of Residues18
Detailsbinding site for residue U5Y Z 301
ChainResidue
ZTHR1
ZSER20
ZTHR21
ZGLN22
ZSER27
ZVAL31
ZILE45
ZGLY47
ZTHR48
ZALA49
ZALA52
ZCIT302
ZHOH1227
aSER122
aASP124
aGLY128
aTRP129
aASN130

site_idAF5
Number of Residues6
Detailsbinding site for residue CIT Z 302
ChainResidue
ZTHR1
ZALA46
ZGLY47
ZGLY140
ZSER141
ZU5Y301

site_idAF6
Number of Residues17
Detailsbinding site for residue U5Y a 301
ChainResidue
aTHR1
aSER20
aTHR21
aGLN22
aSER27
aVAL31
aLYS33
aILE45
aGLY47
aTHR48
aALA49
aCIT302
aHOH413
aHOH415
bASP124
bGLY128
bTRP129

site_idAF7
Number of Residues6
Detailsbinding site for residue CIT a 302
ChainResidue
aTHR1
aALA46
aGLY47
aGLY140
aSER141
aU5Y301

site_idAF8
Number of Residues18
Detailsbinding site for residue U5Y b 301
ChainResidue
VSER122
VASP124
VGLY128
VTRP129
VHOH407
bTHR1
bSER20
bTHR21
bGLN22
bSER27
bVAL31
bILE45
bGLY47
bTHR48
bALA49
bALA52
bCIT302
bHOH439

site_idAF9
Number of Residues6
Detailsbinding site for residue CIT b 302
ChainResidue
LASN24
bTHR1
bGLY47
bGLY140
bSER141
bU5Y301

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues33
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"25224505","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues14
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"20711362","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues14
DetailsSite: {"description":"Covalent link with the inhibitor MLN-273","evidences":[{"source":"PubMed","id":"16468986","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

240971

PDB entries from 2025-08-27

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