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6W8D

Structure of DNMT3A (R882H) in complex with CGT DNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0008168molecular_functionmethyltransferase activity
D0008168molecular_functionmethyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues19
Detailsbinding site for residue SAH A 1001
ChainResidue
APHE640
AASP686
AVAL687
AGLY707
APRO709
ALEU730
AARG891
ASER892
ATRP893
AHOH1102
AHOH1112
AASP641
AGLY642
AILE643
ATHR645
ASER663
AGLU664
AVAL665
ACYS666

site_idAC2
Number of Residues18
Detailsbinding site for residue SAH D 1001
ChainResidue
DPHE640
DASP641
DGLY642
DILE643
DTHR645
DSER663
DGLU664
DVAL665
DASP686
DVAL687
DARG688
DGLY707
DPRO709
DLEU730
DARG891
DSER892
DTRP893
DHOH1125

site_idAC3
Number of Residues19
Detailsbinding site for Di-nucleotide DG E 426 and PYO E 427
ChainResidue
DSER708
DCYS710
DSER714
DILE715
DVAL716
DGLU756
DVAL758
DALA760
DARG792
DARG831
DTHR832
DTHR834
DGLY890
DARG891
EDT425
EDG428
FDG442
FDC443
FDA444

site_idAC4
Number of Residues19
Detailsbinding site for Di-nucleotide PYO E 427 and DG E 428
ChainResidue
DSER708
DCYS710
DASN711
DSER714
DVAL716
DASN717
DGLU756
DVAL758
DALA760
DARG792
DTHR834
DTHR835
DARG836
DGLY890
DARG891
EDG426
EDT429
FDA440
FDC441

site_idAC5
Number of Residues20
Detailsbinding site for Di-nucleotide DG F 426 and PYO F 427
ChainResidue
ASER708
ACYS710
ASER714
AILE715
AVAL716
AGLU756
AVAL758
AARG790
AARG792
AARG831
ATHR832
ATHR834
AGLY890
AARG891
AHOH1111
EDG442
EDC443
FDT425
FDG428
FHOH501

site_idAC6
Number of Residues21
Detailsbinding site for Di-nucleotide PYO F 427 and DG F 428
ChainResidue
AVAL716
AASN717
APRO718
AGLU756
AVAL758
AARG790
AARG792
ATHR834
ATHR835
AARG836
AGLY890
AARG891
AHOH1111
EDC441
EDG442
FDG426
FDT429
ASER708
ACYS710
AASN711
ASER714

Functional Information from PROSITE/UniProt
site_idPS00094
Number of Residues13
DetailsC5_MTASE_1 C-5 cytosine-specific DNA methylases active site. DlVigGsPCnDLS
ChainResidueDetails
AASP702-SER714

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01016, ECO:0000255|PROSITE-ProRule:PRU10018
ChainResidueDetails
ACYS710
DCYS710

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:17713477, ECO:0007744|PDB:2QRV
ChainResidueDetails
AASP641
AGLU664
AASP686
AARG891
DASP641
DGLU664
DASP686
DARG891

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: S-methylcysteine; by autocatalysis => ECO:0000250|UniProtKB:O88508
ChainResidueDetails
ACYS710
DCYS710

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PDB entries from 2024-09-11

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