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6VUG

Diabody bound to a Reverse Transcriptase Aptamer Complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003964molecular_functionRNA-directed DNA polymerase activity
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
A0006278biological_processRNA-templated DNA biosynthetic process
B0003964molecular_functionRNA-directed DNA polymerase activity
B0006278biological_processRNA-templated DNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue SO4 B 501
ChainResidue
BPRO226
BARG358
BLYS366
CSER159
CTYR161

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 B 502
ChainResidue
BGLN222
BLYS223
BGLU224
DARG61

site_idAC3
Number of Residues3
Detailsbinding site for residue SO4 B 503
ChainResidue
BTHR362
BASN363
BLYS366

site_idAC4
Number of Residues6
Detailsbinding site for residue SO4 B 504
ChainResidue
BGLY196
BGLN197
BHIS198
BARG199
DTHR32
DSER33

site_idAC5
Number of Residues3
Detailsbinding site for residue SO4 B 505
ChainResidue
BGLU233
BHIS235
BTRP239

site_idAC6
Number of Residues3
Detailsbinding site for residue SO4 B 506
ChainResidue
BALA98
BLYS101
BLYS102

site_idAC7
Number of Residues2
Detailsbinding site for residue SO4 B 507
ChainResidue
BLYS353
BARG356

site_idAC8
Number of Residues3
Detailsbinding site for residue SO4 B 508
ChainResidue
BSER68
BTHR69
BLYS219

site_idAC9
Number of Residues5
Detailsbinding site for residue GOL B 509
ChainResidue
BTRP239
BTHR240
BTYR339
BLYS350
BGLU378

site_idAD1
Number of Residues2
Detailsbinding site for residue SO4 C 301
ChainResidue
CTYR178
DTHR104

site_idAD2
Number of Residues2
Detailsbinding site for residue SO4 C 302
ChainResidue
CGLN166
CLEU176

site_idAD3
Number of Residues2
Detailsbinding site for residue SO4 C 303
ChainResidue
CPRO137
CSER138

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsRegion: {"description":"RT 'primer grip'"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues32
DetailsMotif: {"description":"Tryptophan repeat motif"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsSite: {"description":"Essential for RT p66/p51 heterodimerization"}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsSite: {"description":"Cleavage; by viral protease; partial"}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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