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6VUA

X-ray structure of human CD38 catalytic domain with 2'-Cl-araNAD+

Functional Information from GO Data
ChainGOidnamespacecontents
A0061809molecular_functionNAD+ nucleotidase, cyclic ADP-ribose generating
B0061809molecular_functionNAD+ nucleotidase, cyclic ADP-ribose generating
Functional Information from PDB Data
site_idAC1
Number of Residues25
Detailsbinding site for residue ROJ A 401
ChainResidue
ATRP125
ASER186
ATRP189
ASER193
ASER220
ATHR221
APHE222
AGLU226
AHOH503
AHOH521
AHOH563
ASER126
AHOH578
AHOH596
AHOH598
AHOH599
AHOH673
AHOH682
AARG127
ALYS129
AGLU146
AASP155
AASP156
AARG177
ALYS178

site_idAC2
Number of Residues5
Detailsbinding site for residue K A 402
ChainResidue
APRO232
AVAL235
AASN270
AHOH602
AHOH718

site_idAC3
Number of Residues9
Detailsbinding site for residue PO4 A 403
ChainResidue
ACYS180
ASER181
AARG212
ASER213
AHOH509
AHOH514
AHOH561
AHOH658
AHOH667

site_idAC4
Number of Residues5
Detailsbinding site for residue PEG A 404
ChainResidue
APRO60
AGLN83
ATRP86
AASP87
ALYS90

site_idAC5
Number of Residues7
Detailsbinding site for residue MPD A 405
ChainResidue
AMET110
ATHR114
AGLN115
ATHR148
AVAL192
APHE196
AHOH567

site_idAC6
Number of Residues9
Detailsbinding site for residue PGE A 406
ChainResidue
AHIS74
ATHR136
AGLN137
AARG140
AMET142
APHE143
AASP147
AHOH618
AHOH690

site_idAC7
Number of Residues9
Detailsbinding site for residue PEG A 407
ChainResidue
ATHR56
ALYS57
AASP156
AHOH562
AHOH574
AHOH665
BLYS57
BARG58
BHOH557

site_idAC8
Number of Residues5
Detailsbinding site for residue K B 402
ChainResidue
BPRO232
BVAL235
BASN270
BHOH565
BHOH677

site_idAC9
Number of Residues10
Detailsbinding site for residue PO4 B 403
ChainResidue
BCYS180
BSER181
BARG212
BSER213
BHOH504
BHOH510
BHOH574
BHOH595
BHOH618
BHOH620

site_idAD1
Number of Residues5
Detailsbinding site for residue MPD B 404
ChainResidue
BMET110
BGLY113
BTHR114
BGLN115
BHOH532

site_idAD2
Number of Residues4
Detailsbinding site for residue MPD B 405
ChainResidue
BPRO118
BARG140
BASP141
BPHE143

site_idAD3
Number of Residues6
Detailsbinding site for residue PEG B 406
ChainResidue
BGLN49
BTRP50
BGLY52
BGLN171
BSER172
BPEG408

site_idAD4
Number of Residues6
Detailsbinding site for residue PEG B 407
ChainResidue
ALYS69
BGLN83
BTRP86
BLYS90
BHOH626
BHOH630

site_idAD5
Number of Residues5
Detailsbinding site for residue PEG B 408
ChainResidue
AHOH554
BLYS57
BPEG406
BHOH556
BHOH664

site_idAD6
Number of Residues31
Detailsbinding site for Di-peptide ROJ B 401 and GLU B 226
ChainResidue
BLEU124
BTRP125
BSER126
BARG127
BLYS129
BGLU146
BASP155
BASP156
BARG177
BLYS178
BSER186
BTRP189
BSER193
BALA197
BSER220
BTHR221
BPHE222
BVAL225
BVAL227
BHIS228
BASN229
BLEU230
BHOH511
BHOH547
BHOH549
BHOH560
BHOH583
BHOH584
BHOH607
BHOH623
BHOH644

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: ACT_SITE => ECO:0000305|PubMed:7961800
ChainResidueDetails
ACYS119
ACYS201
BCYS119
BCYS201

site_idSWS_FT_FI2
Number of Residues4
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218
ChainResidueDetails
AASP100
AASP209
BASP100
BASP209

site_idSWS_FT_FI3
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AALA164
BALA164

site_idSWS_FT_FI4
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:19349973
ChainResidueDetails
AASP219
BASP219

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PDB entries from 2024-07-10

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