Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6UZ7

K.lactis 80S ribosome with p/PE tRNA and eIF5B

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
1	0000166	molecular_function	nucleotide binding
1	0003743	molecular_function	translation initiation factor activity
1	0003924	molecular_function	GTPase activity
1	0005525	molecular_function	GTP binding
1	0005737	cellular_component	cytoplasm
1	0005739	cellular_component	mitochondrion
1	0006412	biological_process	translation
1	0006413	biological_process	translational initiation
1	0016787	molecular_function	hydrolase activity
1	0046872	molecular_function	metal ion binding
A	0000028	biological_process	ribosomal small subunit assembly
A	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A	0000461	biological_process	endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A	0003735	molecular_function	structural constituent of ribosome
A	0005737	cellular_component	cytoplasm
A	0005840	cellular_component	ribosome
A	0006412	biological_process	translation
A	0015935	cellular_component	small ribosomal subunit
A	0022627	cellular_component	cytosolic small ribosomal subunit
A	1990904	cellular_component	ribonucleoprotein complex
AA	0002181	biological_process	cytoplasmic translation
AA	0003723	molecular_function	RNA binding
AA	0003735	molecular_function	structural constituent of ribosome
AA	0005840	cellular_component	ribosome
AA	0006412	biological_process	translation
AA	0022625	cellular_component	cytosolic large ribosomal subunit
AA	1990904	cellular_component	ribonucleoprotein complex
AB	0003723	molecular_function	RNA binding
AB	0003735	molecular_function	structural constituent of ribosome
AB	0005737	cellular_component	cytoplasm
AB	0005840	cellular_component	ribosome
AB	0006412	biological_process	translation
AB	0022625	cellular_component	cytosolic large ribosomal subunit
AB	1990904	cellular_component	ribonucleoprotein complex
AC	0003735	molecular_function	structural constituent of ribosome
AC	0005840	cellular_component	ribosome
AC	0006412	biological_process	translation
AC	1990904	cellular_component	ribonucleoprotein complex
AD	0000027	biological_process	ribosomal large subunit assembly
AD	0003735	molecular_function	structural constituent of ribosome
AD	0005737	cellular_component	cytoplasm
AD	0005840	cellular_component	ribosome
AD	0006412	biological_process	translation
AD	0008097	molecular_function	5S rRNA binding
AD	0022625	cellular_component	cytosolic large ribosomal subunit
AD	0022626	cellular_component	cytosolic ribosome
AD	1990904	cellular_component	ribonucleoprotein complex
AE	0000027	biological_process	ribosomal large subunit assembly
AE	0002181	biological_process	cytoplasmic translation
AE	0003723	molecular_function	RNA binding
AE	0003735	molecular_function	structural constituent of ribosome
AE	0005840	cellular_component	ribosome
AE	0006412	biological_process	translation
AE	0022625	cellular_component	cytosolic large ribosomal subunit
AE	1990904	cellular_component	ribonucleoprotein complex
AF	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AF	0003723	molecular_function	RNA binding
AF	0003735	molecular_function	structural constituent of ribosome
AF	0005840	cellular_component	ribosome
AF	0022625	cellular_component	cytosolic large ribosomal subunit
AF	1990904	cellular_component	ribonucleoprotein complex
AG	0003723	molecular_function	RNA binding
AG	0005840	cellular_component	ribosome
AG	0022625	cellular_component	cytosolic large ribosomal subunit
AG	0042254	biological_process	ribosome biogenesis
AG	1990904	cellular_component	ribonucleoprotein complex
AH	0002181	biological_process	cytoplasmic translation
AH	0003735	molecular_function	structural constituent of ribosome
AH	0005840	cellular_component	ribosome
AH	0006412	biological_process	translation
AH	0019843	molecular_function	rRNA binding
AH	0022625	cellular_component	cytosolic large ribosomal subunit
AH	1990904	cellular_component	ribonucleoprotein complex
AI	0003735	molecular_function	structural constituent of ribosome
AI	0005840	cellular_component	ribosome
AI	0006412	biological_process	translation
AI	1990904	cellular_component	ribonucleoprotein complex
AJ	0003735	molecular_function	structural constituent of ribosome
AJ	0005840	cellular_component	ribosome
AJ	0006412	biological_process	translation
AJ	1990904	cellular_component	ribonucleoprotein complex
AL	0003723	molecular_function	RNA binding
AL	0003735	molecular_function	structural constituent of ribosome
AL	0005840	cellular_component	ribosome
AL	0006412	biological_process	translation
AL	0022625	cellular_component	cytosolic large ribosomal subunit
AL	1990904	cellular_component	ribonucleoprotein complex
AM	0000027	biological_process	ribosomal large subunit assembly
AM	0000470	biological_process	maturation of LSU-rRNA
AM	0003723	molecular_function	RNA binding
AM	0003735	molecular_function	structural constituent of ribosome
AM	0005730	cellular_component	nucleolus
AM	0005737	cellular_component	cytoplasm
AM	0005840	cellular_component	ribosome
AM	0006412	biological_process	translation
AM	0022625	cellular_component	cytosolic large ribosomal subunit
AM	0032991	cellular_component	protein-containing complex
AM	0042273	biological_process	ribosomal large subunit biogenesis
AM	1990904	cellular_component	ribonucleoprotein complex
AN	0002181	biological_process	cytoplasmic translation
AN	0003723	molecular_function	RNA binding
AN	0003735	molecular_function	structural constituent of ribosome
AN	0005840	cellular_component	ribosome
AN	0006412	biological_process	translation
AN	0022625	cellular_component	cytosolic large ribosomal subunit
AN	1990904	cellular_component	ribonucleoprotein complex
AO	0003729	molecular_function	mRNA binding
AO	0003735	molecular_function	structural constituent of ribosome
AO	0005840	cellular_component	ribosome
AO	0006412	biological_process	translation
AO	0015934	cellular_component	large ribosomal subunit
AO	0017148	biological_process	negative regulation of translation
AO	0022625	cellular_component	cytosolic large ribosomal subunit
AO	1990904	cellular_component	ribonucleoprotein complex
AP	0000448	biological_process	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AP	0002181	biological_process	cytoplasmic translation
AP	0003735	molecular_function	structural constituent of ribosome
AP	0005840	cellular_component	ribosome
AP	0006412	biological_process	translation
AP	0015934	cellular_component	large ribosomal subunit
AP	0022625	cellular_component	cytosolic large ribosomal subunit
AP	0030687	cellular_component	preribosome, large subunit precursor
AP	1990904	cellular_component	ribonucleoprotein complex
AQ	0003723	molecular_function	RNA binding
AQ	0003735	molecular_function	structural constituent of ribosome
AQ	0005840	cellular_component	ribosome
AQ	0006412	biological_process	translation
AQ	0022625	cellular_component	cytosolic large ribosomal subunit
AQ	1990904	cellular_component	ribonucleoprotein complex
AR	0003723	molecular_function	RNA binding
AR	0003735	molecular_function	structural constituent of ribosome
AR	0005840	cellular_component	ribosome
AR	0006412	biological_process	translation
AR	0015934	cellular_component	large ribosomal subunit
AR	0022625	cellular_component	cytosolic large ribosomal subunit
AR	0022626	cellular_component	cytosolic ribosome
AR	1990904	cellular_component	ribonucleoprotein complex
AS	0003735	molecular_function	structural constituent of ribosome
AS	0005840	cellular_component	ribosome
AS	0006412	biological_process	translation
AT	0003735	molecular_function	structural constituent of ribosome
AT	0005840	cellular_component	ribosome
AT	0006412	biological_process	translation
AT	0015934	cellular_component	large ribosomal subunit
AT	1990904	cellular_component	ribonucleoprotein complex
AU	0002181	biological_process	cytoplasmic translation
AU	0003723	molecular_function	RNA binding
AU	0003735	molecular_function	structural constituent of ribosome
AU	0005840	cellular_component	ribosome
AU	0006412	biological_process	translation
AU	0022625	cellular_component	cytosolic large ribosomal subunit
AU	1990904	cellular_component	ribonucleoprotein complex
AV	0003735	molecular_function	structural constituent of ribosome
AV	0005840	cellular_component	ribosome
AV	0006412	biological_process	translation
AV	0022625	cellular_component	cytosolic large ribosomal subunit
AV	0070180	molecular_function	large ribosomal subunit rRNA binding
AV	1990904	cellular_component	ribonucleoprotein complex
AW	0002181	biological_process	cytoplasmic translation
AW	0003729	molecular_function	mRNA binding
AW	0003735	molecular_function	structural constituent of ribosome
AW	0005840	cellular_component	ribosome
AW	0006413	biological_process	translational initiation
AW	0006414	biological_process	translational elongation
AW	0015934	cellular_component	large ribosomal subunit
AW	0022625	cellular_component	cytosolic large ribosomal subunit
AW	0022626	cellular_component	cytosolic ribosome
AW	1990904	cellular_component	ribonucleoprotein complex
AX	0003723	molecular_function	RNA binding
AX	0003735	molecular_function	structural constituent of ribosome
AX	0005840	cellular_component	ribosome
AX	0006412	biological_process	translation
AX	0019843	molecular_function	rRNA binding
AX	1990904	cellular_component	ribonucleoprotein complex
AY	0003723	molecular_function	RNA binding
AY	0003735	molecular_function	structural constituent of ribosome
AY	0005840	cellular_component	ribosome
AY	0006412	biological_process	translation
AY	0015934	cellular_component	large ribosomal subunit
AY	0032991	cellular_component	protein-containing complex
AY	1990904	cellular_component	ribonucleoprotein complex
AZ	0003735	molecular_function	structural constituent of ribosome
AZ	0005840	cellular_component	ribosome
AZ	0006412	biological_process	translation
AZ	1990904	cellular_component	ribonucleoprotein complex
B	0003735	molecular_function	structural constituent of ribosome
B	0005737	cellular_component	cytoplasm
B	0005840	cellular_component	ribosome
B	0006412	biological_process	translation
B	0022627	cellular_component	cytosolic small ribosomal subunit
B	1990904	cellular_component	ribonucleoprotein complex
Ba	0003735	molecular_function	structural constituent of ribosome
Ba	0005840	cellular_component	ribosome
Ba	0006412	biological_process	translation
Ba	0015934	cellular_component	large ribosomal subunit
Ba	0022625	cellular_component	cytosolic large ribosomal subunit
Ba	1990904	cellular_component	ribonucleoprotein complex
Bb	0002181	biological_process	cytoplasmic translation
Bb	0003735	molecular_function	structural constituent of ribosome
Bb	0005840	cellular_component	ribosome
Bb	0006412	biological_process	translation
Bb	0022625	cellular_component	cytosolic large ribosomal subunit
Bb	1990904	cellular_component	ribonucleoprotein complex
Bc	0003723	molecular_function	RNA binding
Bc	0005840	cellular_component	ribosome
Bc	1990904	cellular_component	ribonucleoprotein complex
Bd	0002181	biological_process	cytoplasmic translation
Bd	0003735	molecular_function	structural constituent of ribosome
Bd	0005840	cellular_component	ribosome
Bd	0006412	biological_process	translation
Bd	0022625	cellular_component	cytosolic large ribosomal subunit
Bd	1990904	cellular_component	ribonucleoprotein complex
Be	0003735	molecular_function	structural constituent of ribosome
Be	0005840	cellular_component	ribosome
Be	0006412	biological_process	translation
Be	0022625	cellular_component	cytosolic large ribosomal subunit
Be	1990904	cellular_component	ribonucleoprotein complex
Bf	0003735	molecular_function	structural constituent of ribosome
Bf	0005840	cellular_component	ribosome
Bf	0006412	biological_process	translation
Bf	1990904	cellular_component	ribonucleoprotein complex
Bg	0003735	molecular_function	structural constituent of ribosome
Bg	0005840	cellular_component	ribosome
Bg	0006412	biological_process	translation
Bg	1990904	cellular_component	ribonucleoprotein complex
Bh	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Bh	0002181	biological_process	cytoplasmic translation
Bh	0003729	molecular_function	mRNA binding
Bh	0003735	molecular_function	structural constituent of ribosome
Bh	0005840	cellular_component	ribosome
Bh	0006412	biological_process	translation
Bh	0022625	cellular_component	cytosolic large ribosomal subunit
Bh	0030687	cellular_component	preribosome, large subunit precursor
Bh	1990904	cellular_component	ribonucleoprotein complex
Bi	0003723	molecular_function	RNA binding
Bi	0003735	molecular_function	structural constituent of ribosome
Bi	0005840	cellular_component	ribosome
Bi	0006412	biological_process	translation
Bi	1990904	cellular_component	ribonucleoprotein complex
Bj	0000448	biological_process	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Bj	0003723	molecular_function	RNA binding
Bj	0003735	molecular_function	structural constituent of ribosome
Bj	0005840	cellular_component	ribosome
Bj	0006412	biological_process	translation
Bj	0008270	molecular_function	zinc ion binding
Bj	0019843	molecular_function	rRNA binding
Bj	0022625	cellular_component	cytosolic large ribosomal subunit
Bj	0030687	cellular_component	preribosome, large subunit precursor
Bj	0046872	molecular_function	metal ion binding
Bj	1990904	cellular_component	ribonucleoprotein complex
Bk	0003735	molecular_function	structural constituent of ribosome
Bk	0005840	cellular_component	ribosome
Bk	0006412	biological_process	translation
Bk	0022618	biological_process	protein-RNA complex assembly
Bk	0022625	cellular_component	cytosolic large ribosomal subunit
Bk	1990904	cellular_component	ribonucleoprotein complex
Bl	0003735	molecular_function	structural constituent of ribosome
Bl	0005840	cellular_component	ribosome
Bl	0006412	biological_process	translation
Bm	0000027	biological_process	ribosomal large subunit assembly
Bm	0000055	biological_process	ribosomal large subunit export from nucleus
Bm	0003735	molecular_function	structural constituent of ribosome
Bm	0005634	cellular_component	nucleus
Bm	0005737	cellular_component	cytoplasm
Bm	0005840	cellular_component	ribosome
Bm	0006412	biological_process	translation
Bm	0016567	biological_process	protein ubiquitination
Bm	0022625	cellular_component	cytosolic large ribosomal subunit
Bm	0046872	molecular_function	metal ion binding
Bm	1990904	cellular_component	ribonucleoprotein complex
Bn	0003735	molecular_function	structural constituent of ribosome
Bn	0005840	cellular_component	ribosome
Bn	0006412	biological_process	translation
Bo	0003735	molecular_function	structural constituent of ribosome
Bo	0005840	cellular_component	ribosome
Bo	0006412	biological_process	translation
Bo	0046677	biological_process	response to antibiotic
Bo	0046898	biological_process	response to cycloheximide
Bo	1990904	cellular_component	ribonucleoprotein complex
Bp	0003735	molecular_function	structural constituent of ribosome
Bp	0005840	cellular_component	ribosome
Bp	0006412	biological_process	translation
Bp	0008270	molecular_function	zinc ion binding
Bp	1990904	cellular_component	ribonucleoprotein complex
Bq	0000055	biological_process	ribosomal large subunit export from nucleus
Bq	0003723	molecular_function	RNA binding
Bq	0003735	molecular_function	structural constituent of ribosome
Bq	0005840	cellular_component	ribosome
Bq	0006412	biological_process	translation
Bq	0015934	cellular_component	large ribosomal subunit
Bq	1990904	cellular_component	ribonucleoprotein complex
Br	0000027	biological_process	ribosomal large subunit assembly
Br	0002181	biological_process	cytoplasmic translation
Br	0003735	molecular_function	structural constituent of ribosome
Br	0005840	cellular_component	ribosome
Br	0022625	cellular_component	cytosolic large ribosomal subunit
Br	0042254	biological_process	ribosome biogenesis
Br	0070180	molecular_function	large ribosomal subunit rRNA binding
Br	1990904	cellular_component	ribonucleoprotein complex
C	0003723	molecular_function	RNA binding
C	0003735	molecular_function	structural constituent of ribosome
C	0005840	cellular_component	ribosome
C	0006412	biological_process	translation
C	0015935	cellular_component	small ribosomal subunit
C	0022627	cellular_component	cytosolic small ribosomal subunit
C	0046872	molecular_function	metal ion binding
C	1990904	cellular_component	ribonucleoprotein complex
D	0003723	molecular_function	RNA binding
D	0003735	molecular_function	structural constituent of ribosome
D	0005634	cellular_component	nucleus
D	0005840	cellular_component	ribosome
D	0006412	biological_process	translation
D	0015935	cellular_component	small ribosomal subunit
D	0022626	cellular_component	cytosolic ribosome
D	0022627	cellular_component	cytosolic small ribosomal subunit
D	1990904	cellular_component	ribonucleoprotein complex
E	0002181	biological_process	cytoplasmic translation
E	0003723	molecular_function	RNA binding
E	0003735	molecular_function	structural constituent of ribosome
E	0005840	cellular_component	ribosome
E	0006412	biological_process	translation
E	0019843	molecular_function	rRNA binding
E	0022627	cellular_component	cytosolic small ribosomal subunit
E	1990904	cellular_component	ribonucleoprotein complex
F	0003723	molecular_function	RNA binding
F	0003735	molecular_function	structural constituent of ribosome
F	0005840	cellular_component	ribosome
F	0006412	biological_process	translation
F	0015935	cellular_component	small ribosomal subunit
F	1990904	cellular_component	ribonucleoprotein complex
G	0003735	molecular_function	structural constituent of ribosome
G	0005840	cellular_component	ribosome
G	0006412	biological_process	translation
G	1990904	cellular_component	ribonucleoprotein complex
H	0003735	molecular_function	structural constituent of ribosome
H	0005840	cellular_component	ribosome
H	0006364	biological_process	rRNA processing
H	0006412	biological_process	translation
H	0022627	cellular_component	cytosolic small ribosomal subunit
H	0030686	cellular_component	90S preribosome
H	0032040	cellular_component	small-subunit processome
H	0042274	biological_process	ribosomal small subunit biogenesis
H	1990904	cellular_component	ribonucleoprotein complex
I	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
I	0003735	molecular_function	structural constituent of ribosome
I	0005840	cellular_component	ribosome
I	0006412	biological_process	translation
I	1990904	cellular_component	ribonucleoprotein complex
J	0003723	molecular_function	RNA binding
J	0003735	molecular_function	structural constituent of ribosome
J	0005840	cellular_component	ribosome
J	0006412	biological_process	translation
J	0015935	cellular_component	small ribosomal subunit
J	0019843	molecular_function	rRNA binding
J	0022627	cellular_component	cytosolic small ribosomal subunit
J	0032040	cellular_component	small-subunit processome
J	0042274	biological_process	ribosomal small subunit biogenesis
J	1990904	cellular_component	ribonucleoprotein complex
K	0000054	biological_process	ribosomal subunit export from nucleus
K	0003723	molecular_function	RNA binding
K	0003735	molecular_function	structural constituent of ribosome
K	0005737	cellular_component	cytoplasm
K	0005840	cellular_component	ribosome
K	0022627	cellular_component	cytosolic small ribosomal subunit
K	0034198	biological_process	cellular response to amino acid starvation
K	1990904	cellular_component	ribonucleoprotein complex
L	0000028	biological_process	ribosomal small subunit assembly
L	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
L	0003735	molecular_function	structural constituent of ribosome
L	0005840	cellular_component	ribosome
L	0006412	biological_process	translation
L	0019843	molecular_function	rRNA binding
L	0022627	cellular_component	cytosolic small ribosomal subunit
L	1990904	cellular_component	ribonucleoprotein complex
M	0003735	molecular_function	structural constituent of ribosome
M	0005840	cellular_component	ribosome
M	0006412	biological_process	translation
M	1990904	cellular_component	ribonucleoprotein complex
N	0003735	molecular_function	structural constituent of ribosome
N	0005730	cellular_component	nucleolus
N	0005840	cellular_component	ribosome
N	0006412	biological_process	translation
N	0022627	cellular_component	cytosolic small ribosomal subunit
N	0070181	molecular_function	small ribosomal subunit rRNA binding
N	1990904	cellular_component	ribonucleoprotein complex
O	0000028	biological_process	ribosomal small subunit assembly
O	0003735	molecular_function	structural constituent of ribosome
O	0005840	cellular_component	ribosome
O	0006412	biological_process	translation
O	0032040	cellular_component	small-subunit processome
O	1990904	cellular_component	ribonucleoprotein complex
P	0000028	biological_process	ribosomal small subunit assembly
P	0003723	molecular_function	RNA binding
P	0003735	molecular_function	structural constituent of ribosome
P	0005840	cellular_component	ribosome
P	0006412	biological_process	translation
P	0015935	cellular_component	small ribosomal subunit
P	0022627	cellular_component	cytosolic small ribosomal subunit
P	1990904	cellular_component	ribonucleoprotein complex
Q	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Q	0003723	molecular_function	RNA binding
Q	0003735	molecular_function	structural constituent of ribosome
Q	0005840	cellular_component	ribosome
Q	0006412	biological_process	translation
Q	0015935	cellular_component	small ribosomal subunit
Q	0022627	cellular_component	cytosolic small ribosomal subunit
Q	1990904	cellular_component	ribonucleoprotein complex
R	0000028	biological_process	ribosomal small subunit assembly
R	0003735	molecular_function	structural constituent of ribosome
R	0005829	cellular_component	cytosol
R	0005840	cellular_component	ribosome
R	0006412	biological_process	translation
R	1990904	cellular_component	ribonucleoprotein complex
S	0000054	biological_process	ribosomal subunit export from nucleus
S	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
S	0003676	molecular_function	nucleic acid binding
S	0003723	molecular_function	RNA binding
S	0003735	molecular_function	structural constituent of ribosome
S	0005737	cellular_component	cytoplasm
S	0005829	cellular_component	cytosol
S	0005840	cellular_component	ribosome
S	0006412	biological_process	translation
S	0015935	cellular_component	small ribosomal subunit
S	0046872	molecular_function	metal ion binding
S	1990904	cellular_component	ribonucleoprotein complex
T	0000028	biological_process	ribosomal small subunit assembly
T	0000054	biological_process	ribosomal subunit export from nucleus
T	0003723	molecular_function	RNA binding
T	0003735	molecular_function	structural constituent of ribosome
T	0005840	cellular_component	ribosome
T	0006412	biological_process	translation
T	0022627	cellular_component	cytosolic small ribosomal subunit
T	0042274	biological_process	ribosomal small subunit biogenesis
T	0046872	molecular_function	metal ion binding
T	1990904	cellular_component	ribonucleoprotein complex
U	0003735	molecular_function	structural constituent of ribosome
U	0005840	cellular_component	ribosome
U	0006412	biological_process	translation
U	0015935	cellular_component	small ribosomal subunit
U	1990904	cellular_component	ribonucleoprotein complex
V	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
V	0000461	biological_process	endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
V	0003735	molecular_function	structural constituent of ribosome
V	0005737	cellular_component	cytoplasm
V	0005840	cellular_component	ribosome
V	0006364	biological_process	rRNA processing
V	0006412	biological_process	translation
V	0022627	cellular_component	cytosolic small ribosomal subunit
V	1990904	cellular_component	ribonucleoprotein complex
W	0003735	molecular_function	structural constituent of ribosome
W	0005840	cellular_component	ribosome
W	0006412	biological_process	translation
W	0022627	cellular_component	cytosolic small ribosomal subunit
W	1990904	cellular_component	ribonucleoprotein complex
X	0003735	molecular_function	structural constituent of ribosome
X	0005840	cellular_component	ribosome
X	0006412	biological_process	translation
X	0015935	cellular_component	small ribosomal subunit
X	0046872	molecular_function	metal ion binding
X	1990904	cellular_component	ribonucleoprotein complex
Y	0003735	molecular_function	structural constituent of ribosome
Y	0005840	cellular_component	ribosome
Y	0006412	biological_process	translation
Y	1990904	cellular_component	ribonucleoprotein complex
Z	0005840	cellular_component	ribosome
Z	1990904	cellular_component	ribonucleoprotein complex
a	0000054	biological_process	ribosomal subunit export from nucleus
a	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
a	0003729	molecular_function	mRNA binding
a	0003735	molecular_function	structural constituent of ribosome
a	0005840	cellular_component	ribosome
a	0006412	biological_process	translation
a	0022627	cellular_component	cytosolic small ribosomal subunit
a	0030686	cellular_component	90S preribosome
a	0046872	molecular_function	metal ion binding
a	1990904	cellular_component	ribonucleoprotein complex
b	0000028	biological_process	ribosomal small subunit assembly
b	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
b	0003735	molecular_function	structural constituent of ribosome
b	0005840	cellular_component	ribosome
b	0006412	biological_process	translation
b	0008270	molecular_function	zinc ion binding
b	0022627	cellular_component	cytosolic small ribosomal subunit
b	0046872	molecular_function	metal ion binding
b	1990904	cellular_component	ribonucleoprotein complex
c	0000028	biological_process	ribosomal small subunit assembly
c	0003735	molecular_function	structural constituent of ribosome
c	0005840	cellular_component	ribosome
c	0006412	biological_process	translation
c	0022627	cellular_component	cytosolic small ribosomal subunit
c	0030490	biological_process	maturation of SSU-rRNA
c	1990904	cellular_component	ribonucleoprotein complex
d	0002181	biological_process	cytoplasmic translation
d	0003735	molecular_function	structural constituent of ribosome
d	0005840	cellular_component	ribosome
d	0006412	biological_process	translation
d	0008270	molecular_function	zinc ion binding
d	0022627	cellular_component	cytosolic small ribosomal subunit
d	1990904	cellular_component	ribonucleoprotein complex
e	0003735	molecular_function	structural constituent of ribosome
e	0005829	cellular_component	cytosol
e	0005840	cellular_component	ribosome
e	0006412	biological_process	translation
e	0022627	cellular_component	cytosolic small ribosomal subunit
e	1990904	cellular_component	ribonucleoprotein complex
f	0003735	molecular_function	structural constituent of ribosome
f	0005634	cellular_component	nucleus
f	0005737	cellular_component	cytoplasm
f	0005840	cellular_component	ribosome
f	0006412	biological_process	translation
f	0008270	molecular_function	zinc ion binding
f	0031386	molecular_function	protein tag activity
f	0046872	molecular_function	metal ion binding
f	1990904	cellular_component	ribonucleoprotein complex
g	0005092	molecular_function	GDP-dissociation inhibitor activity
g	0006417	biological_process	regulation of translation
g	0007186	biological_process	G protein-coupled receptor signaling pathway
g	0043022	molecular_function	ribosome binding
g	0045182	molecular_function	translation regulator activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue ZN Bj 100

Chain	Residue
Bj	CYS19
Bj	CYS22
Bj	CYS34
Bj	CYS37

site_id	AC2
Number of Residues	4
Details	binding site for residue ZN Bm 200

Chain	Residue
Bm	CYS96
Bm	CYS99
Bm	CYS110
Bm	CYS115

site_id	AC3
Number of Residues	5
Details	binding site for residue ZN Bo 200

Chain	Residue
Bo	CYS17
Bo	CYS74
Bo	SER76
Bo	CYS77
Bo	CYS12

site_id	AC4
Number of Residues	4
Details	binding site for residue ZN a 500

Chain	Residue
a	CYS23
a	CYS26
a	CYS74
a	CYS77

site_id	AC5
Number of Residues	3
Details	binding site for residue ZN b 101

Chain	Residue
b	CYS40
b	GLU57
b	SER58

site_id	AC6
Number of Residues	3
Details	binding site for residue ZN f 501

Chain	Residue
f	CYS121
f	CYS139
f	CYS142

site_id	AC7
Number of Residues	20
Details	binding site for residue GCP 1 1001

Chain	Residue
1	HIS378
1	VAL379
1	ASP380
1	THR381
1	GLY382
1	LYS383
1	THR384
1	LYS385
1	GLN396
1	GLY402
1	ILE403
1	THR404
1	THR442
1	HIS445
1	ASN495
1	LYS496
1	ASP498
1	ARG499
1	ALA564
1	VAL565

Functional Information from PROSITE/UniProt

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AIVVrqskawrrk.DGvflyFedNagVI

Chain	Residue	Details
AV	ALA76-ILE102

site_id	PS00050
Number of Residues	16
Details	RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLTadfdaldI

Chain	Residue	Details
AX	LYS120-ILE135

site_id	PS00051
Number of Residues	17
Details	RIBOSOMAL_L39E Ribosomal protein L39e signature. RTnntIryNakrRNWRR

Chain	Residue	Details
Bl	ARG30-ARG46

site_id	PS00052
Number of Residues	27
Details	RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsLMmngrnnGKKlkavrIVkhT

Chain	Residue	Details
F	GLU93-THR119

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GyvILTTSaGIMdheeAH

Chain	Residue	Details
W	GLY100-HIS117

site_id	PS00054
Number of Residues	23
Details	RIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GLrIgrieDvTPvPSD

Chain	Residue	Details
O	LEU102-ASP124

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR

Chain	Residue	Details
X	LYS62-ARG69

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgQcRPIS

Chain	Residue	Details
L	GLY120-SER132

site_id	PS00299
Number of Residues	26
Details	UBIQUITIN_1 Ubiquitin domain signature. KskIqDkegIPpdqQrLIFaGkqleD

Chain	Residue	Details
f	LYS27-ASP52
Bm	LYS27-ASP52

site_id	PS00323
Number of Residues	25
Details	RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKvfnqveIrpemVGhyLGEFsiT

Chain	Residue	Details
P	ASN98-THR122

site_id	PS00358
Number of Residues	17
Details	RIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLSGQtpVqSkARyT

Chain	Residue	Details
AJ	LEU37-THR53

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvSQvyAirqAiAKGL

Chain	Residue	Details
Q	GLY71-LEU89

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY

Chain	Residue	Details
N	VAL98-TYR128

site_id	PS00430
Number of Residues	66
Details	TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. maqaqkwypaeevpapkqtrkaarpqklraslvpgtvlillagrfrgkrvvylkhled.........................................................NTLLVSGP

Chain	Residue	Details
AE	MET1-PRO66

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTfRAhGRinkyesspSHIELvV

Chain	Residue	Details
AP	ARG126-VAL150

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PktRGVAmNPvD

Chain	Residue	Details
AA	PRO197-ASP208

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FeqnemiDvvAvTkGHGfeGvthR

Chain	Residue	Details
AB	PHE209-ARG232

site_id	PS00475
Number of Residues	32
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGkGrIpdvp.ViVkarfVSklAeekIkaaG

Chain	Residue	Details
Ba	LYS111-GLY142

site_id	PS00528
Number of Residues	15
Details	RIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRLAaPhhWmLdK

Chain	Residue	Details
E	HIS8-LYS22

site_id	PS00529
Number of Residues	23
Details	RIBOSOMAL_S24E Ribosomal protein S24e signature. YGggKStGFGlVYNSvadakkfE

Chain	Residue	Details
Y	TYR64-GLU86

site_id	PS00548
Number of Residues	37
Details	RIBOSOMAL_S3 Ribosomal protein S3 signature. AKsmkfadGfLihSgqpVndfIEtatrhvlLrqGvlG

Chain	Residue	Details
D	ALA147-GLY183

site_id	PS00578
Number of Residues	12
Details	RIBOSOMAL_S6E Ribosomal protein S6e signature. IAGGnDkqGfPM

Chain	Residue	Details
G	ILE52-MET63

site_id	PS00579
Number of Residues	15
Details	RIBOSOMAL_L29 Ribosomal protein L29 signature. SLPKINtVRKNIARV

Chain	Residue	Details
Bh	SER40-VAL54

site_id	PS00580
Number of Residues	21
Details	RIBOSOMAL_L32E Ribosomal protein L32e signature. FkRhhsdRyhRVsen..WRKqkG

Chain	Residue	Details
Be	PHE17-GLY37

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAvvVVGDsn.GhVGlGiktak.EVag.AI

Chain	Residue	Details
C	GLY98-ILE130

site_id	PS00628
Number of Residues	20
Details	RIBOSOMAL_S19E Ribosomal protein S19e signature. PhkhvdaSgsInRkVLQsLE

Chain	Residue	Details
T	PRO90-GLU109

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVYKlglAkSvhhARvLI

Chain	Residue	Details
J	LEU105-ILE129

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. VLqlLrLnQinSgTfvkvtkatseLLklIepYV

Chain	Residue	Details
AF	VAL99-VAL131

site_id	PS00646
Number of Residues	14
Details	RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGiRHfwGlrVRGQ

Chain	Residue	Details
S	ARG123-GLN136

site_id	PS00678
Number of Residues	15
Details	WD_REPEATS_1 Trp-Asp (WD) repeats signature. AVSAswDkTLRLWNL

Chain	Residue	Details
g	ALA81-LEU95
g	ILE123-THR137
g	ALA218-LEU232

site_id	PS00700
Number of Residues	22
Details	RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QicrVrnKdiRkFlDGIYVseK

Chain	Residue	Details
AH	GLN163-LYS184

site_id	PS00709
Number of Residues	25
Details	RIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkyslGyKstVKslRqGkaKlIII

Chain	Residue	Details
Bc	SER20-ILE44

site_id	PS00712
Number of Residues	16
Details	RIBOSOMAL_S17E Ribosomal protein S17e signature. IqSKrLRNkIAGYtTH

Chain	Residue	Details
R	ILE41-HIS56

site_id	PS00733
Number of Residues	8
Details	RIBOSOMAL_S26E Ribosomal protein S26e signature. YCISCAIH

Chain	Residue	Details
a	TYR73-HIS80

site_id	PS00783
Number of Residues	24
Details	RIBOSOMAL_L13 Ribosomal protein L13 signature. VRGMIShktarGKaalerLkVFeG

Chain	Residue	Details
AO	VAL85-GLY108

site_id	PS00939
Number of Residues	27
Details	RIBOSOMAL_L1E Ribosomal protein L1e signature. NqneKryATaSAIaASAvpslvlaRGH

Chain	Residue	Details
AC	ASN114-HIS140

site_id	PS00948
Number of Residues	14
Details	RIBOSOMAL_S7E Ribosomal protein S7e signature. KLtRELEKKFQdRH

Chain	Residue	Details
H	LYS76-HIS89

site_id	PS00961
Number of Residues	9
Details	RIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL

Chain	Residue	Details
c	GLU58-LEU66

site_id	PS00962
Number of Residues	12
Details	RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. AqLLLAARVHLG

Chain	Residue	Details
A	ALA14-GLY25

site_id	PS00963
Number of Residues	25
Details	RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlVIVtDprsDaqaIkEssyvNIP

Chain	Residue	Details
A	PRO118-PRO142

site_id	PS00993
Number of Residues	21
Details	RIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTavGKlfrvgvVtIlDaG

Chain	Residue	Details
Bc	GLU76-GLY96

site_id	PS00996
Number of Residues	9
Details	RIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA

Chain	Residue	Details
V	LEU11-ALA19

site_id	PS01073
Number of Residues	18
Details	RIBOSOMAL_L24E Ribosomal protein L24e signature. FsGakIyPGrGtlFvRgD

Chain	Residue	Details
AW	PHE8-ASP25

site_id	PS01077
Number of Residues	20
Details	RIBOSOMAL_L37E Ribosomal protein L37e signature. GTpSfGkRhnks.HtlCkRCG

Chain	Residue	Details
Bj	GLY4-GLY23

site_id	PS01082
Number of Residues	18
Details	RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CkkmgVPYaiVkGKarLG

Chain	Residue	Details
AG	CYS169-GLY186

site_id	PS01104
Number of Residues	15
Details	RIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFTLaEIkaaG

Chain	Residue	Details
AL	ARG70-GLY84

site_id	PS01105
Number of Residues	22
Details	RIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKInRtHGnsGvVrAtFrsnLP

Chain	Residue	Details
Bf	GLY69-PRO90

site_id	PS01106
Number of Residues	18
Details	RIBOSOMAL_L18E Ribosomal protein L18e signature. KsLflSKinRPpVSVsRI

Chain	Residue	Details
AQ	LYS50-ILE67

site_id	PS01108
Number of Residues	18
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. EDeVlVVrGskKGqe.GkV

Chain	Residue	Details
AY	GLU53-VAL70

site_id	PS01144
Number of Residues	15
Details	RIBOSOMAL_L31E Ribosomal protein L31e signature. VRLDpkLNqEiWkRG

Chain	Residue	Details
Bd	VAL49-GLY63

site_id	PS01145
Number of Residues	14
Details	RIBOSOMAL_L34E Ribosomal protein L34e signature. TkSnKikvvKTPGG

Chain	Residue	Details
Bg	THR15-GLY28

site_id	PS01168
Number of Residues	33
Details	RIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgClnittvFShAqtavtCesCStvLctPtG

Chain	Residue	Details
b	LYS36-GLY68

site_id	PS01171
Number of Residues	26
Details	RIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikangsihk.GmpHkfYqGkTG

Chain	Residue	Details
AT	GLY37-GLY62

site_id	PS01172
Number of Residues	12
Details	RIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKvvLRleC

Chain	Residue	Details
Bo	LYS63-CYS74

site_id	PS01189
Number of Residues	19
Details	RIBOSOMAL_S12E Ribosomal protein S12e signature. ALKvvLrtSlvhDGLarGL

Chain	Residue	Details
M	ALA20-LEU38

site_id	PS01190
Number of Residues	11
Details	RIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRlIELIR

Chain	Residue	Details
Bi	PRO52-ARG62

site_id	PS01191
Number of Residues	13
Details	RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVvEvCLaDL

Chain	Residue	Details
B	LEU61-LEU73

site_id	PS01193
Number of Residues	20
Details	RIBOSOMAL_S8E Ribosomal protein S8e signature. RaaTGAkraqf.RkKrKfELG

Chain	Residue	Details
I	ARG11-GLY30

site_id	PS01194
Number of Residues	24
Details	RIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGFVIYRvRVrRG

Chain	Residue	Details
AN	ASP46-GLY69

site_id	PS01199
Number of Residues	20
Details	RIBOSOMAL_L1 Ribosomal protein L1 signature. IkqVprlLGpqLSKAGkFPT

Chain	Residue	Details
Bq	ILE117-THR136

site_id	PS01257
Number of Residues	22
Details	RIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqqGMRgAWGKPhGlaARV

Chain	Residue	Details
AI	ALA108-VAL129

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI18
Number of Residues	1
Details	Modified residue: {"description":"N-acetylserine","evidences":[{"source":"HAMAP-Rule","id":"MF_03015","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI27
Number of Residues	21
Details	Zinc finger: {"description":"C4-type"}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)