6UXW
SWI/SNF nucleosome complex with ADP-BeFx
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000182 | molecular_function | rDNA binding |
| A | 0000785 | cellular_component | chromatin |
| A | 0003677 | molecular_function | DNA binding |
| A | 0005515 | molecular_function | protein binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0006261 | biological_process | DNA-templated DNA replication |
| A | 0006302 | biological_process | double-strand break repair |
| A | 0006338 | biological_process | chromatin remodeling |
| A | 0006355 | biological_process | regulation of DNA-templated transcription |
| A | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| A | 0016514 | cellular_component | SWI/SNF complex |
| A | 0016887 | molecular_function | ATP hydrolysis activity |
| A | 0031492 | molecular_function | nucleosomal DNA binding |
| A | 0031496 | biological_process | positive regulation of mating type switching |
| A | 0034198 | biological_process | cellular response to amino acid starvation |
| A | 0035973 | biological_process | aggrephagy |
| A | 0042148 | biological_process | DNA strand invasion |
| A | 0042393 | molecular_function | histone binding |
| A | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
| A | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| A | 0061629 | molecular_function | RNA polymerase II-specific DNA-binding transcription factor binding |
| A | 0140008 | molecular_function | histone H4 reader activity |
| A | 0140015 | molecular_function | histone H3K14ac reader activity |
| A | 0140566 | molecular_function | histone reader activity |
| A | 0140658 | molecular_function | ATP-dependent chromatin remodeler activity |
| A | 1900189 | biological_process | positive regulation of cell adhesion involved in single-species biofilm formation |
| A | 2000219 | biological_process | positive regulation of invasive growth in response to glucose limitation |
| B | 0000785 | cellular_component | chromatin |
| B | 0000976 | molecular_function | transcription cis-regulatory region binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0006261 | biological_process | DNA-templated DNA replication |
| B | 0006338 | biological_process | chromatin remodeling |
| B | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0016514 | cellular_component | SWI/SNF complex |
| B | 0031496 | biological_process | positive regulation of mating type switching |
| B | 0034198 | biological_process | cellular response to amino acid starvation |
| B | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| B | 0061629 | molecular_function | RNA polymerase II-specific DNA-binding transcription factor binding |
| C | 0000228 | cellular_component | nuclear chromosome |
| C | 0000724 | biological_process | double-strand break repair via homologous recombination |
| C | 0000785 | cellular_component | chromatin |
| C | 0005515 | molecular_function | protein binding |
| C | 0005634 | cellular_component | nucleus |
| C | 0005829 | cellular_component | cytosol |
| C | 0006338 | biological_process | chromatin remodeling |
| C | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| C | 0016514 | cellular_component | SWI/SNF complex |
| C | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| C | 0045991 | biological_process | carbon catabolite activation of transcription |
| C | 0061629 | molecular_function | RNA polymerase II-specific DNA-binding transcription factor binding |
| C | 2000219 | biological_process | positive regulation of invasive growth in response to glucose limitation |
| D | 0000785 | cellular_component | chromatin |
| D | 0003677 | molecular_function | DNA binding |
| D | 0005515 | molecular_function | protein binding |
| D | 0005634 | cellular_component | nucleus |
| D | 0005829 | cellular_component | cytosol |
| D | 0006338 | biological_process | chromatin remodeling |
| D | 0006355 | biological_process | regulation of DNA-templated transcription |
| D | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| D | 0016514 | cellular_component | SWI/SNF complex |
| D | 0031496 | biological_process | positive regulation of mating type switching |
| D | 0042393 | molecular_function | histone binding |
| D | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| D | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| E | 0000785 | cellular_component | chromatin |
| E | 0003677 | molecular_function | DNA binding |
| E | 0005515 | molecular_function | protein binding |
| E | 0005634 | cellular_component | nucleus |
| E | 0005829 | cellular_component | cytosol |
| E | 0006338 | biological_process | chromatin remodeling |
| E | 0006355 | biological_process | regulation of DNA-templated transcription |
| E | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| E | 0016514 | cellular_component | SWI/SNF complex |
| E | 0031496 | biological_process | positive regulation of mating type switching |
| E | 0042393 | molecular_function | histone binding |
| E | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| E | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| F | 0000785 | cellular_component | chromatin |
| F | 0003677 | molecular_function | DNA binding |
| F | 0005515 | molecular_function | protein binding |
| F | 0005634 | cellular_component | nucleus |
| F | 0005829 | cellular_component | cytosol |
| F | 0006338 | biological_process | chromatin remodeling |
| F | 0006355 | biological_process | regulation of DNA-templated transcription |
| F | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| F | 0016514 | cellular_component | SWI/SNF complex |
| F | 0031496 | biological_process | positive regulation of mating type switching |
| F | 0042393 | molecular_function | histone binding |
| F | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| F | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| G | 0000785 | cellular_component | chromatin |
| G | 0003677 | molecular_function | DNA binding |
| G | 0005515 | molecular_function | protein binding |
| G | 0005634 | cellular_component | nucleus |
| G | 0005829 | cellular_component | cytosol |
| G | 0006338 | biological_process | chromatin remodeling |
| G | 0006355 | biological_process | regulation of DNA-templated transcription |
| G | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| G | 0016514 | cellular_component | SWI/SNF complex |
| G | 0031496 | biological_process | positive regulation of mating type switching |
| G | 0042393 | molecular_function | histone binding |
| G | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| G | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| H | 0000727 | biological_process | double-strand break repair via break-induced replication |
| H | 0000785 | cellular_component | chromatin |
| H | 0005198 | molecular_function | structural molecule activity |
| H | 0005515 | molecular_function | protein binding |
| H | 0005634 | cellular_component | nucleus |
| H | 0005829 | cellular_component | cytosol |
| H | 0006338 | biological_process | chromatin remodeling |
| H | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| H | 0016514 | cellular_component | SWI/SNF complex |
| H | 0034198 | biological_process | cellular response to amino acid starvation |
| H | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| P | 0000785 | cellular_component | chromatin |
| P | 0003674 | molecular_function | molecular_function |
| P | 0003682 | molecular_function | chromatin binding |
| P | 0005198 | molecular_function | structural molecule activity |
| P | 0005515 | molecular_function | protein binding |
| P | 0005634 | cellular_component | nucleus |
| P | 0006325 | biological_process | chromatin organization |
| P | 0006337 | biological_process | nucleosome disassembly |
| P | 0006338 | biological_process | chromatin remodeling |
| P | 0006355 | biological_process | regulation of DNA-templated transcription |
| P | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| P | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| P | 0016514 | cellular_component | SWI/SNF complex |
| P | 0016586 | cellular_component | RSC-type complex |
| P | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| Q | 0000785 | cellular_component | chromatin |
| Q | 0005198 | molecular_function | structural molecule activity |
| Q | 0005515 | molecular_function | protein binding |
| Q | 0005634 | cellular_component | nucleus |
| Q | 0006325 | biological_process | chromatin organization |
| Q | 0006337 | biological_process | nucleosome disassembly |
| Q | 0006338 | biological_process | chromatin remodeling |
| Q | 0006355 | biological_process | regulation of DNA-templated transcription |
| Q | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| Q | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| Q | 0016514 | cellular_component | SWI/SNF complex |
| Q | 0016586 | cellular_component | RSC-type complex |
| Q | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| R | 0000786 | cellular_component | nucleosome |
| R | 0003677 | molecular_function | DNA binding |
| R | 0005515 | molecular_function | protein binding |
| R | 0005634 | cellular_component | nucleus |
| R | 0005654 | cellular_component | nucleoplasm |
| R | 0005694 | cellular_component | chromosome |
| R | 0030527 | molecular_function | structural constituent of chromatin |
| R | 0031492 | molecular_function | nucleosomal DNA binding |
| R | 0031507 | biological_process | heterochromatin formation |
| R | 0046982 | molecular_function | protein heterodimerization activity |
| S | 0000786 | cellular_component | nucleosome |
| S | 0003677 | molecular_function | DNA binding |
| S | 0005515 | molecular_function | protein binding |
| S | 0005634 | cellular_component | nucleus |
| S | 0005694 | cellular_component | chromosome |
| S | 0006334 | biological_process | nucleosome assembly |
| S | 0030527 | molecular_function | structural constituent of chromatin |
| S | 0031507 | biological_process | heterochromatin formation |
| S | 0046982 | molecular_function | protein heterodimerization activity |
| T | 0000786 | cellular_component | nucleosome |
| T | 0003677 | molecular_function | DNA binding |
| T | 0005634 | cellular_component | nucleus |
| T | 0005694 | cellular_component | chromosome |
| T | 0030527 | molecular_function | structural constituent of chromatin |
| T | 0031507 | biological_process | heterochromatin formation |
| T | 0046982 | molecular_function | protein heterodimerization activity |
| U | 0000786 | cellular_component | nucleosome |
| U | 0002227 | biological_process | innate immune response in mucosa |
| U | 0003677 | molecular_function | DNA binding |
| U | 0005515 | molecular_function | protein binding |
| U | 0005634 | cellular_component | nucleus |
| U | 0005694 | cellular_component | chromosome |
| U | 0006325 | biological_process | chromatin organization |
| U | 0019731 | biological_process | antibacterial humoral response |
| U | 0030527 | molecular_function | structural constituent of chromatin |
| U | 0031507 | biological_process | heterochromatin formation |
| U | 0046982 | molecular_function | protein heterodimerization activity |
| U | 0061844 | biological_process | antimicrobial humoral immune response mediated by antimicrobial peptide |
| V | 0000786 | cellular_component | nucleosome |
| V | 0003677 | molecular_function | DNA binding |
| V | 0005515 | molecular_function | protein binding |
| V | 0005634 | cellular_component | nucleus |
| V | 0005654 | cellular_component | nucleoplasm |
| V | 0005694 | cellular_component | chromosome |
| V | 0030527 | molecular_function | structural constituent of chromatin |
| V | 0031492 | molecular_function | nucleosomal DNA binding |
| V | 0031507 | biological_process | heterochromatin formation |
| V | 0046982 | molecular_function | protein heterodimerization activity |
| W | 0000786 | cellular_component | nucleosome |
| W | 0003677 | molecular_function | DNA binding |
| W | 0005515 | molecular_function | protein binding |
| W | 0005634 | cellular_component | nucleus |
| W | 0005694 | cellular_component | chromosome |
| W | 0006334 | biological_process | nucleosome assembly |
| W | 0030527 | molecular_function | structural constituent of chromatin |
| W | 0031507 | biological_process | heterochromatin formation |
| W | 0046982 | molecular_function | protein heterodimerization activity |
| X | 0000786 | cellular_component | nucleosome |
| X | 0003677 | molecular_function | DNA binding |
| X | 0005634 | cellular_component | nucleus |
| X | 0005694 | cellular_component | chromosome |
| X | 0030527 | molecular_function | structural constituent of chromatin |
| X | 0031507 | biological_process | heterochromatin formation |
| X | 0046982 | molecular_function | protein heterodimerization activity |
| Y | 0000786 | cellular_component | nucleosome |
| Y | 0002227 | biological_process | innate immune response in mucosa |
| Y | 0003677 | molecular_function | DNA binding |
| Y | 0005515 | molecular_function | protein binding |
| Y | 0005634 | cellular_component | nucleus |
| Y | 0005694 | cellular_component | chromosome |
| Y | 0006325 | biological_process | chromatin organization |
| Y | 0019731 | biological_process | antibacterial humoral response |
| Y | 0030527 | molecular_function | structural constituent of chromatin |
| Y | 0031507 | biological_process | heterochromatin formation |
| Y | 0046982 | molecular_function | protein heterodimerization activity |
| Y | 0061844 | biological_process | antimicrobial humoral immune response mediated by antimicrobial peptide |
| Z | 0000785 | cellular_component | chromatin |
| Z | 0005515 | molecular_function | protein binding |
| Z | 0005634 | cellular_component | nucleus |
| Z | 0006337 | biological_process | nucleosome disassembly |
| Z | 0006338 | biological_process | chromatin remodeling |
| Z | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| Z | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| Z | 0007059 | biological_process | chromosome segregation |
| Z | 0015616 | molecular_function | DNA translocase activity |
| Z | 0016514 | cellular_component | SWI/SNF complex |
| Z | 0016586 | cellular_component | RSC-type complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | binding site for residue PO4 P 501 |
| Chain | Residue |
| P | HIS15 |
| P | ASP190 |
| P | ALA224 |
| P | GLN229 |
| P | LYS232 |
| P | PO4503 |
| P | HOH608 |
| site_id | AC2 |
| Number of Residues | 2 |
| Details | binding site for residue PO4 P 502 |
| Chain | Residue |
| P | ASN53 |
| P | TYR89 |
| site_id | AC3 |
| Number of Residues | 11 |
| Details | binding site for residue PO4 P 503 |
| Chain | Residue |
| P | HIS15 |
| P | ARG16 |
| P | ALA161 |
| P | GLY186 |
| P | LYS232 |
| P | SER397 |
| P | THR398 |
| P | PO4501 |
| P | HOH602 |
| P | HOH603 |
| P | HOH608 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue PO4 P 504 |
| Chain | Residue |
| P | HIS11 |
| P | GLY13 |
| P | GLU141 |
| P | PO4505 |
| P | HOH601 |
| P | HOH602 |
| P | HOH612 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | binding site for residue PO4 P 505 |
| Chain | Residue |
| P | SER14 |
| P | ASP158 |
| P | SER162 |
| P | ASN165 |
| P | ARG181 |
| P | PO4504 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | binding site for residue PO4 Q 501 |
| Chain | Residue |
| Q | SER16 |
| Q | GLN17 |
| Q | ASN70 |
| Q | GLY71 |
| Q | THR166 |
| Q | HIS167 |
| Q | HIS168 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue PO4 Q 502 |
| Chain | Residue |
| Q | ARG15 |
| Q | GLY338 |
| Q | SER425 |
| Q | GLU426 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | binding site for residue PO4 Q 503 |
| Chain | Residue |
| Q | GLY344 |
| Q | LYS346 |
| Q | HOH605 |
| Q | HOH616 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | binding site for residue PO4 Q 504 |
| Chain | Residue |
| Q | ARG15 |
| Q | ASP163 |
| Q | GLY338 |
| Q | HOH601 |
| site_id | AD1 |
| Number of Residues | 4 |
| Details | binding site for residue PO4 Q 505 |
| Chain | Residue |
| Q | ASP206 |
| Q | ASP208 |
| Q | ASP286 |
| Q | LYS288 |
| site_id | AD2 |
| Number of Residues | 5 |
| Details | binding site for residue PO4 Q 506 |
| Chain | Residue |
| P | LYS293 |
| Q | GLY314 |
| Q | ASP318 |
| Q | ASP356 |
| Q | HIS357 |
| site_id | AD3 |
| Number of Residues | 2 |
| Details | binding site for residue PO4 A 1801 |
| Chain | Residue |
| A | ARG619 |
| P | ASP431 |
| site_id | AD4 |
| Number of Residues | 14 |
| Details | binding site for residue ADP A 1802 |
| Chain | Residue |
| A | THR766 |
| A | LYS768 |
| A | TYR770 |
| A | GLY795 |
| A | GLY797 |
| A | LYS798 |
| A | THR799 |
| A | ILE800 |
| A | TRP838 |
| A | ASN1171 |
| A | GLN1173 |
| A | ILE1200 |
| A | BEF1803 |
| A | MG1804 |
| site_id | AD5 |
| Number of Residues | 5 |
| Details | binding site for residue BEF A 1803 |
| Chain | Residue |
| A | ASN1171 |
| A | ARG1196 |
| A | ARG1199 |
| A | ADP1802 |
| A | MG1804 |
| site_id | AD6 |
| Number of Residues | 3 |
| Details | binding site for residue MG A 1804 |
| Chain | Residue |
| A | GLU895 |
| A | ADP1802 |
| A | BEF1803 |
Functional Information from PROSITE/UniProt
| site_id | PS00046 |
| Number of Residues | 7 |
| Details | HISTONE_H2A Histone H2A signature. AGLqFPV |
| Chain | Residue | Details |
| T | ALA21-VAL27 |
| site_id | PS00047 |
| Number of Residues | 5 |
| Details | HISTONE_H4 Histone H4 signature. GAKRH |
| Chain | Residue | Details |
| S | GLY14-HIS18 |
| site_id | PS00322 |
| Number of Residues | 7 |
| Details | HISTONE_H3_1 Histone H3 signature 1. KAPRKQL |
| Chain | Residue | Details |
| R | LYS14-LEU20 |
| site_id | PS00357 |
| Number of Residues | 23 |
| Details | HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG |
| Chain | Residue | Details |
| U | ARG89-GLY111 |
| site_id | PS00959 |
| Number of Residues | 9 |
| Details | HISTONE_H3_2 Histone H3 signature 2. PFqRLVREI |
| Chain | Residue | Details |
| R | PRO66-ILE74 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P68431","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"Q71DI3","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P84228","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q71DI3","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q71DI3","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q71DI3","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P84243","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-glutaryllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q71DI3","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q71DI3","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 2 |
| Details | Lipidation: {"description":"S-palmitoyl cysteine","evidences":[{"source":"UniProtKB","id":"Q71DI3","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"N6-propionyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine; by PAK2","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-methacryllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 4 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-benzoyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P0C0S8","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI21 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-isonicotinyllysine","evidences":[{"source":"UniProtKB","id":"P0C0S8","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI22 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-benzoyllysine; alternate","evidences":[{"source":"UniProtKB","id":"C0HKE1","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI23 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine","evidences":[{"source":"UniProtKB","id":"P0C0S8","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI24 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P0C0S8","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI25 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N5-methylglutamine","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI26 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-glutaryllysine; alternate","evidences":[{"source":"UniProtKB","id":"P0C0S8","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI27 |
| Number of Residues | 6 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI28 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"N6-isonicotinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q93079","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI29 |
| Number of Residues | 6 |
| Details | Modified residue: {"description":"N6-methacryllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q93079","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI30 |
| Number of Residues | 2 |
| Details | Glycosylation: {"description":"O-linked (GlcNAc) serine","evidences":[{"source":"UniProtKB","id":"P62807","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI31 |
| Number of Residues | 4 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P0C1H4","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI32 |
| Number of Residues | 165 |
| Details | Domain: {"description":"Helicase ATP-binding","evidences":[{"source":"PROSITE-ProRule","id":"PRU00541","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI33 |
| Number of Residues | 163 |
| Details | Domain: {"description":"Helicase C-terminal","evidences":[{"source":"PROSITE-ProRule","id":"PRU00542","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI34 |
| Number of Residues | 3 |
| Details | Motif: {"description":"DEGH box"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI35 |
| Number of Residues | 7 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00541","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI36 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI37 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22106047","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI38 |
| Number of Residues | 17 |
| Details | Zinc finger: {"description":"C4-type"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI39 |
| Number of Residues | 194 |
| Details | Domain: {"description":"SWIRM","evidences":[{"source":"PROSITE-ProRule","id":"PRU00247","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI40 |
| Number of Residues | 56 |
| Details | Region: {"description":"Leucine-zipper"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI41 |
| Number of Residues | 51 |
| Details | Domain: {"description":"SANT","evidences":[{"source":"PROSITE-ProRule","id":"PRU00624","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |






